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101

Synthetic protein switches: design principles and applications

Stein, Viktor, Alexandrov, Kirill

Journal:

Trends in Biotechnology

Year:

2015

Language:

english

File:

PDF, 674 KB

english, 2015

102

Gateway-compatible vectors for high-throughput protein expression in pro- and eukaryotic cell-free systems

Gagoski, Dejan, Mureev, Sergey, Giles, Nichole, Johnston, Wayne, Dahmer-Heath, Mareike, Škalamera, Dubravka, Gonda, Thomas J., Alexandrov, Kirill

Journal:

Journal of Biotechnology

Year:

2015

Language:

english

File:

PDF, 1.24 MB

english, 2015

103

RECOGNITION OF PROTEIN FUNCTION USING THE LOCAL SIMILARITY

ALEXANDROV, KIRILL, SOBOLEV, BORIS, FILIMONOV, DMITRY, POROIKOV, VLADIMIR

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2008

Language:

english

File:

PDF, 1.11 MB

english, 2008

104

Semisynthetic tRNA Complement Mediates in Vitro Protein Synthesis

Cui, Zhenling, Stein, Viktor, Tnimov, Zakir, Mureev, Sergey, Alexandrov, Kirill

Journal:

Journal of the American Chemical Society

Year:

2015

Language:

english

File:

PDF, 2.59 MB

english, 2015

105

[The Enzymes] Protein Prenylation PART A Volume 29 || Organization and Function of the Rab Prenylation and Recycling Machinery

Alexandrov, Kirill

Year:

2011

Language:

english

File:

PDF, 1.49 MB

english, 2011

106

A highly sensitive prenylation assay reveals in vivo effects of bisphosphonate drug on the Rab prenylome of macrophages outside the skeleton

Ali, Naveid, Jurczyluk, Julie, Shay, Gemma, Tnimov, Zakir, Alexandrov, Kirill, Munoz, Marcia A, Skinner, Oliver P, Pavlos, Nathan J, Rogers, Michael J

Journal:

Year:

2015

Language:

english

File:

PDF, 1.31 MB

english, 2015

107

Engineering PQQ-glucose dehydrogenase into an allosteric electrochemical Ca2+ sensor

Guo, Zhong, Johnston, Wayne, Stein, Viktor, Kalimuthu, Palraj, Bernhardt, P, Perez-Alcala, Siro, Alexandrov, Kirill

Journal:

Chemical Communications

Year:

2015

Language:

english

File:

PDF, 801 KB

english, 2015

108

The Conserved Lysine of the Catalytic Domain of Protein Kinases is Actively Involved in the Phosphotransfer Reaction and not Required for Anchoring ATP

Ana C. Carrera, Kirill Alexandrov and Thomas M. Roberts

Journal:

Proceedings of the National Academy of Sciences

Year:

1993

Language:

english

File:

PDF, 1.15 MB

english, 1993

109

Increased Polyubiquitination and Proteasomal Degradation of a Munc18-1 Disease-Linked Mutant Causes Temperature-Sensitive Defect in Exocytosis

Martin, Sally, Papadopulos, Andreas, Tomatis, Vanesa M., Sierecki, Emma, Malintan, Nancy T., Gormal, Rachel S., Giles, Nichole, Johnston, Wayne A., Alexandrov, Kirill, Gambin, Yann, Collins, Brett M.,

Journal:

Year:

2014

Language:

english

File:

PDF, 4.55 MB

english, 2014

110

SPIE Proceedings [SPIE SPIE BiOS - San Francisco, California, United States (Saturday 7 February 2015)] Dynamics and Fluctuations in Biomedical Photonics XII - Correlation mapping microscopy

Tuchin, Valery V., Larin, Kirill V., Leahy, Martin J., Wang, Ruikang K., McGrath, James, Alexandrov, Sergey, Owens, Peter, Subhash, Hrebesh M., Leahy, Martin J.

Year:

2015

Language:

english

File:

PDF, 1.19 MB

english, 2015

111

Chain Assemblies from Nanoparticles Synthesized by Atmospheric Pressure Plasma Enhanced Chemical Vapor Deposition: The Computational View

Mishin, Maxim V., Zamotin, Kirill Y., Protopopova, Vera S., Alexandrov, Sergey E.

Journal:

Journal of Nanoscience and Nanotechnology

Year:

2015

Language:

english

File:

PDF, 866 KB

english, 2015

112

SPIE Proceedings [SPIE SPIE BiOS - San Francisco, California, United States (Saturday 13 February 2016)] Optical Elastography and Tissue Biomechanics III - Depth-dependent displacement sensitivity analysis and the influence of Doppler angle for quantitative assessment of mechanical properties using phase-sensitive spectral domain optical coherence tomography

Larin, Kirill V., Sampson, David D., Lynch, Gillian, Subhash, Hrebesh, Alexandrov, Sergey, Leahy, Martin

Year:

2016

Language:

english

File:

PDF, 535 KB

english, 2016

113

Mammalian farnesyltransferase α subunit regulates vacuolar protein sorting-associated protein 4A (Vps4A) – dependent intracellular trafficking through recycling endosomes

Kubala, Marta H., Norwood, Suzanne J., Gomez, Guillermo A., Jones, Alun, Johnston, Wayne, Yap, Alpha S., Mureev, Sergey, Alexandrov, Kirill

Journal:

Biochemical and Biophysical Research Communications

Year:

2015

Language:

english

File:

PDF, 1.32 MB

english, 2015

114

A computational view on vapour phase coagulation of nanoparticles synthesized by atmospheric pressure PECVD

Mishin, Maxim V., Zamotin, Kirill Y., Protopopova, Vera S., Uvarov, Andrey A., Filatov, Leonid A., Baryshnikova, Marina V., Boricheva, Irina K., Alexandrov, Sergey E.

Journal:

Physica status solidi

Year:

2015

Language:

english

File:

PDF, 1.69 MB

english, 2015

115

Performance benchmarking of four cell-free protein expression systems

Gagoski, Dejan, Polinkovsky, Mark E., Mureev, Sergey, Kunert, Anne, Johnston, Wayne, Gambin, Yann, Alexandrov, Kirill

Journal:

Biotechnology and Bioengineering

Year:

2016

Language:

english

File:

PDF, 6.24 MB

english, 2016

116

Engineered PQQ-glucose dehydrogenase as a universal biosensor platform

Guo, Zhong, Murphy, Lindy, Stein, Viktor, Johnston, Wayne, Perez, Siro Alcala, Alexandrov, Kirill

Journal:

Journal of the American Chemical Society

Year:

2016

Language:

english

File:

PDF, 664 KB

english, 2016

117

SCIMP is a transmembrane non-TIR TLR adaptor that promotes proinflammatory cytokine production from macrophages

Luo, Lin, Bokil, Nilesh J., Wall, Adam A., Kapetanovic, Ronan, Lansdaal, Natalie M., Marceline, Faustine, Burgess, Belinda J., Tong, Samuel J., Guo, Zhong, Alexandrov, Kirill, Ross, Ian L., Hibbs, Mar

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 2.32 MB

english, 2017

118

Small-Molecule Inhibitors of the SOX18 Transcription Factor

Fontaine, Frank, Overman, Jeroen, Moustaqil, Mehdi, Mamidyala, Sreeman, Salim, Angela, Narasimhan, Kamesh, Prokoph, Nina, Robertson, Avril A.B., Lua, Linda, Alexandrov, Kirill, Koopman, Peter, Capon,

Journal:

Cell Chemical Biology

Year:

2017

Language:

english

File:

PDF, 2.22 MB

english, 2017

119

Salmonella effector SopD2 interferes with Rab34 function

Teo, Wei Xuan, Yang, Zhe, Kerr, Markus Charles, Luo, Lin, Guo, Zhong, Alexandrov, Kirill, Stow, Jenny Lea, Teasdale, Rohan David

Journal:

Cell Biology International

Year:

2017

Language:

english

File:

PDF, 988 KB

english, 2017

120

Ultrasensitive Scaffold-Dependent Protease Sensors with Large Dynamic Range

Stein, Viktor, Nabi, Masuda, Alexandrov, Kirill

Journal:

ACS Synthetic Biology

Year:

2017

Language:

english

File:

PDF, 946 KB

english, 2017

121

[ASME World Tribology Congress III - Washington, D.C., USA (September 12–16, 2005)] World Tribology Congress III, Volume 1 - Journal Bearings Stability With Consideration of Fluid Inertia

Javorova, Juliana G., Alexandrov, Vassil, Stanulov, Kiril, Tzvetkof, Tzveti

Year:

2005

Language:

english

File:

PDF, 131 KB

english, 2005

122

Low-Temperature Atmospheric Pressure Plasma-Enhanced CVD of Nanocomposite Coatings “Molybdenum Disulfide (Filler)-Silicon Oxide (Matrix)”

Alexandrov, Sergey E., Tyurikov, Kirill S., Kirilenko, Demid A., Redkov, Alexey V., Lipovskii, Andrey A.

Journal:

Advanced Materials Interfaces

Year:

2017

Language:

english

File:

PDF, 1.37 MB

english, 2017

123

Cell-free formation and interactome analysis of caveolae

Jung, WooRam, Sierecki, Emma, Bastiani, Michele, O’Carroll, Ailis, Alexandrov, Kirill, Rae, James, Johnston, Wayne, Hunter, Dominic J.B., Ferguson, Charles, Gambin, Yann, Ariotti, Nicholas, Parton, Ro

Journal:

The Journal of Cell Biology

Year:

2018

Language:

english

File:

PDF, 5.04 MB

english, 2018

124

Oligonucleotide-mediated tRNA sequestration enables one-pot sense codon reassignment in vitro

Cui, Zhenling, Wu, Yue, Mureev, Sergey, Alexandrov, Kirill

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 3.58 MB

english, 2018

125

Towards the Construction of Expressed Proteomes Using a Leishmania tarentolae Based Cell-Free Expression System

Kovtun, Oleksiy, Mureev, Sergey, Johnston, Wayne, Alexandrov, Kirill, Preiss, Thomas

Journal:

Year:

2010

Language:

english

File:

PDF, 1.18 MB

english, 2010

126

Rab GTPase Prenylation Hierarchy and Its Potential Role in Choroideremia Disease

Köhnke, Monika, Delon, Christine, Hastie, Marcus L., Nguyen, Uyen T. T., Wu, Yao-Wen, Waldmann, Herbert, Goody, Roger S., Gorman, Jeffrey J., Alexandrov, Kirill, Delprato, Anna Maria

Journal:

Year:

2013

Language:

english

File:

PDF, 1.38 MB

english, 2013

127

A variable undecad repeat domain in cavin1 regulates caveola formation and stability

Tillu, Vikas A, Lim, Ye‐Wheen, Kovtun, Oleksiy, Mureev, Sergey, Ferguson, Charles, Bastiani, Michele, McMahon, Kerrie‐Ann, Lo, Harriet P, Hall, Thomas E, Alexandrov, Kirill, Collins, Brett M, Parton,

Journal:

Year:

2018

Language:

english

File:

PDF, 6.84 MB

english, 2018

128

Finite-volume models with implicit subgrid-scale parameterization for the differentially heated rotating annulus

Borchert, Sebastian, Achatz, Ulrich, Remmler, Sebastian, Hickel, Stefan, Harlander, Uwe, Vincze, Miklos, Alexandrov, Kiril D., Rieper, Felix, Heppelmann, Tobias, Dolaptchiev, Stamen I.

Journal:

Meteorologische Zeitschrift

Year:

2015

Language:

english

File:

PDF, 1.51 MB

english, 2015

129

[IEEE 2018 International Conference Laser Optics (ICLO) - Saint Petersburg, Russia (2018.6.4-2018.6.8)] 2018 International Conference Laser Optics (ICLO) - Connecting biochemistry and elelctronics with artifical allosteric protein biosensors

Guo, Zhong, Whitfield, Jason, Edwardraja, Selvakumar, Alexandrov, Kirill

Year:

2018

Language:

english

File:

PDF, 77 KB

english, 2018

130

Bioelectrocatalytic Electrodes Modified with PQQ-Glucose Dehydrogenase-Calmodulin Chimera Switchable by Peptide Signals: Pathway to Generic Bioelectronic Systems Controlled by Biomolecular Inputs

Gamella, Maria, Guo, Zhong, Alexandrov, Kirill, Katz, Evgeny

Journal:

ChemElectroChem

Year:

2019

Language:

english

File:

PDF, 4.19 MB

english, 2019

131

Boolean Logic Networks Mimicked with Chimeric Enzymes Activated/Inhibited by Several Input Signals

Katz, Evgeny, Bollella, Paolo, Bellare, Madhura, Kadambar, Vasantha Krishna, Guo, Zhong, Alexandrov, Kirill, Melman, Artem

Journal:

Year:

2019

Language:

english

File:

PDF, 1.50 MB

english, 2019

132

Corona discharge plasma application for the deposition of nanocomposite coatings

Tyurikov, Kirill, Alexandrov, Sergey, Iankevich, Gleb

Journal:

Materials Today: Proceedings

Year:

2020

File:

PDF, 712 KB

2020

133

Mapping interactions among cell-free expressed Zika virus proteins

Varasteh Moradi, SHAYLI, Gagoski, Dejan, Mureev, Sergey, Walden, Patricia, McMahon, Kerrie-Ann, Parton, Robert G., Johnston, Wayne A., Alexandrov, Kirill

Journal:

Journal of Proteome Research

Year:

2020

Language:

english

File:

PDF, 830 KB

english, 2020

134

Boolean Logic Networks Mimicked with Chimeric Enzymes Activated/Inhibited by Several Input Signals

Bollella, Paolo, Bellare, Madhura, Kadambar, Vasantha Krishna, Guo, Zhong, Alexandrov, Kirill, Melman, Artem, Katz, Evgeny

Journal:

Year:

2020

Language:

english

File:

PDF, 581 KB

english, 2020

135

Fast and Controllable Synthesis of CoreâShell Fe 3 O 4 âC Nanoparticles by Aerosol CVD

Tyurikova, Irina A., Alexandrov, Sergey E., Tyurikov, Kirill S., Kirilenko, Demid A., Speshilova, Anastasiya B., Shakhmin, Alexander L.

Journal:

Year:

2020

File:

PDF, 2.49 MB

2020

136

Caged activators of artificial allosteric protein biosensors

Edwardraja, Selvakumar, Guo, Zhong, Whitfield, Jason, Lantadilla, Ignacio Retamal, Johnston, Wayne A., Walden, Patricia, Vickers, Claudia E., Alexandrov, Kirill

Journal:

ACS Synthetic Biology

Year:

2020

File:

PDF, 651 KB

2020

137

Control of Allosteric Protein Electrochemical Switches with Biomolecular and Electronic Signals

Bollella, Paolo, Edwardraja, Selvakumar, Guo, Zhong, Alexandrov, Kirill, Katz, Evgeny

Journal:

The Journal of Physical Chemistry Letters

Year:

2020

File:

PDF, 454 KB

2020

138

Control of Allosteric Electrochemical Protein Switch Using Magnetic Signals

Bollela, Paolo, Edwardraja, Selvakumar, Guo, Zhong, Alexandrov, Kirill, Katz, Evgeny

Journal:

Chemical Communications

Year:

2020

File:

PDF, 1.45 MB

2020

139

Front Cover: Boolean Logic Networks Mimicked with Chimeric Enzymes Activated/Inhibited by Several Input Signals (ChemPhysChem 7/2020)

Bollella, Paolo, Bellare, Madhura, Kadambar, Vasantha Krishna, Guo, Zhong, Alexandrov, Kirill, Melman, Artem, Katz, Evgeny

Journal:

Year:

2020

File:

PDF, 1.65 MB

2020

140

Rational design of novel fluorescent enzyme biosensors for direct detection of strigolactones

Chesterfield, Rebecca J, Whitfield, Jason, Pouvreau, Benjamin, Cao, Da, Alexandrov, Kirill, Beveridgea, Christine, Vickers, Claudia E.

Journal:

ACS Synthetic Biology

Year:

2020

File:

PDF, 1.21 MB

2020

141

An inverted CAV1 (caveolin 1) topology defines novel autophagy-dependent exosome secretion from prostate cancer cells

Ariotti, Nicholas, Wu, Yeping, Okano, Satomi, Gambin, Yann, Follett, Jordan, Rae, James, Ferguson, Charles, Teasdale, Rohan D., Alexandrov, Kirill, Meunier, Frederic A., Hill, Michelle M., Parton, Rob

Journal:

Year:

2020

File:

PDF, 10.84 MB

2020

142

Cell-Free Approach for Non-canonical Amino Acids Incorporation Into Polypeptides

Cui, Zhenling, Johnston, Wayne A., Alexandrov, Kirill

Journal:

Frontiers in Bioengineering and Biotechnology

Year:

2020

File:

PDF, 11.21 MB

2020