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51

U-Compare: share and compare text mining tools with UIMA

Kano, Y., Baumgartner, W. A., McCrohon, L., Ananiadou, S., Cohen, K. B., Hunter, L., Tsujii, J.

Journal:

Year:

2009

Language:

english

File:

PDF, 252 KB

english, 2009

52

A new pattern for using both thoracic arteries to revascularize the entire heart: the π-graft

Sotirios N. Prapas, Constantine E. Anagnostopoulos, Vassilios N. Kotsis, George P. Stavropoulos, Alexis V. Sidiropoulos, Olga G. Ananiadou, George M. Palatianos

Journal:

The Annals of Thoracic Surgery

Year:

2002

Language:

english

File:

PDF, 152 KB

english, 2002

53

Acute Type-A Dissection in a Patient with Severe Hemophilia A

Konstantinos T. Diplaris, Elias A. Karfis, Fotini Ampatzidou, Olga G. Ananiadou, Sofia Vakalopoulou, Athanasios Madesis, Theodora Asteri, George Drossos

Journal:

Journal of Cardiothoracic and Vascular Anesthesia

Year:

2012

Language:

english

File:

PDF, 243 KB

english, 2012

54

DISCOVERING ROBUST EMBEDDINGS IN (DIS)SIMILARITY SPACE FOR HIGH-DIMENSIONAL LINGUISTIC FEATURES

Tingting Mu, Makoto Miwa, Junichi Tsujii, Sophia Ananiadou

Journal:

Computational Intelligence

Year:

2012

Language:

english

File:

PDF, 735 KB

english, 2012

55

Text Mining Supporting Search for Knowledge Discovery in Diabetes

Ananiadou, Sophia, Ohta, Tomoko, Rutter, Martin K.

Journal:

Current Cardiovascular Risk Reports

Year:

2013

Language:

english

File:

PDF, 1.08 MB

english, 2013

56

The Ayia Varvara site project: A case of urban landscape design

M. Ananiadou-Tzimopoulou, D.A. Fatouros

Journal:

Landscape and Urban Planning

Year:

1990

Language:

english

File:

PDF, 5.73 MB

english, 1990

57

U-Compare: A modular NLP workflow construction and evaluation system

Kano, Y., Miwa, M., Cohen, K. B., Hunter, L. E., Ananiadou, S., Tsujii, J.

Journal:

IBM Journal of Research and Development

Year:

2011

Language:

english

File:

PDF, 5.46 MB

english, 2011

58

Extracting semantically enriched events from biomedical literature

Makoto Miwa, Paul Thompson, John McNaught, Douglas B Kell, Sophia Ananiadou

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.35 MB

english, 2012

59

[IEEE 2009 Fifth International Conference on Soft Computing, Computing with Words and Perceptions in System Analysis, Decision and Control (ICSCCW) - Famagusta, Cyprus (2009.09.2-2009.09.4)] 2009 Fifth International Conference on Soft Computing, Computing with Words and Perceptions in System Analysis, Decision and Control - Highly scalable Text Mining - parallel tagging application

Tekiner, Firat, Tsuruoka, Yoshimasa, Tsujii, Jun'ichi, Ananiadou, Sophia

Year:

2009

Language:

english

File:

PDF, 485 KB

english, 2009

60

Wide coverage biomedical event extraction using multiple partially overlapping corpora

Makoto Miwa, Sampo Pyysalo, Tomoko Ohta, Sophia Ananiadou

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 1016 KB

english, 2013

61

Negated bio-events: analysis and identification

Raheel Nawaz, Paul Thompson, Sophia Ananiadou

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 811 KB

english, 2013

62

BioCause: Annotating and analysing causality in the biomedical domain

Claudiu Mihăilă, Tomoko Ohta, Sampo Pyysalo, Sophia Ananiadou

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 798 KB

english, 2013

63

Mining semantically related terms from biomedical literature

Nenadić, Goran, Ananiadou, Sophia

Journal:

ACM Transactions on Asian Language Information Processing

Year:

2006

Language:

english

File:

PDF, 1.34 MB

english, 2006

64

Erythromycin induced neuroprotection during prolonged deep hypothermic circulatory arrest in an acute porcine model

C Koutsogiannidis,F Ampatzidou,O Ananiadou…

Journal:

Journal of Cardiothoracic Surgery

Year:

2013

Language:

english

File:

PDF, 254 KB

english, 2013

65

‘Early’ Post-Cardiotomy Chylopericardium and the Imaging Value of Magnetic Resonance Thoracic-Ductography

Koutsogiannidis, Charilaos-Panagiotis, Ananiadou, Olga, Kapsas, Georgios, Madesis, Athanasios, Palladas, Panagiotis, Drossos, George

Journal:

Heart Lung & Circulation

Year:

2013

Language:

english

File:

PDF, 334 KB

english, 2013

66

Smart Health and Wellbeing

Yang, Christopher C., Leroy, Gondy, Ananiadou, Sophia

Journal:

ACM Transactions on Management Information Systems

Year:

2013

Language:

english

File:

PDF, 96 KB

english, 2013

67

Generalising semantic category disambiguation with large lexical resources for fun and profit

Pontus Stenetorp,Sampo Pyysalo,Sophia Ananiadou…

Journal:

Journal of Biomedical Semantics

Year:

2014

Language:

english

File:

PDF, 912 KB

english, 2014

68

Terminology-based knowledge mining for new knowledge discovery

Mima, Hideki, Ananiadou, Sophia, Matsushima, Katsumori

Journal:

ACM Transactions on Asian Language Information Processing

Year:

2006

Language:

english

File:

PDF, 1.30 MB

english, 2006

69

[IEEE 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007) - Fremont, CA, USA (2007.11.2-2007.11.4)] 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007) - Multi-topic Aspects in Clinical Text Classification

Sasaki, Yutaka, Rea, Brian, Ananiadou, Sophia

Year:

2007

Language:

english

File:

PDF, 173 KB

english, 2007

70

Pericardial fat is strongly associated with atrial fibrillation after coronary artery bypass graft surgery

Drossos, G., Koutsogiannidis, C.-P., Ananiadou, O., Kapsas, G., Ampatzidou, F., Madesis, A., Bismpa, K., Palladas, P., Karagounis, L.

Journal:

European Journal of Cardio-Thoracic Surgery

Year:

2014

Language:

english

File:

PDF, 226 KB

english, 2014

71

[IEEE 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Shanghai, China (2013.12.18-2013.12.21)] 2013 IEEE International Conference on Bioinformatics and Biomedicine - A hybrid approach to recognising discourse causality in the biomedical domain

Mihaila, Claudiu, Ananiadou, Sophia

Year:

2013

Language:

english

File:

PDF, 211 KB

english, 2013

72

[IEEE 2013 IEEE International Conference on Healthcare Informatics (ICHI) - Philadelphia, PA, USA (2013.09.9-2013.09.11)] 2013 IEEE International Conference on Healthcare Informatics - Dealing with Data Sparsity in Drug Named Entity Recognition

Piliouras, Dimitrios, Korkontzelos, Ioannis, Dowsey, Andrew, Ananiadou, Sophia

Year:

2013

Language:

english

File:

PDF, 308 KB

english, 2013

73

[IEEE 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) - Orlando, FL, USA (2011.02.3-2011.02.5)] 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) - Poster: Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from PubMed publications

Kocbek, Simon, Setre, Rune, Stiglic, Gregor, Kim, Jin-Dong, Pernek, Igor, Tsuruoka, Yoshimasa, Kokol, Peter, Ananiadou, Sophia, Tsujii, Jun'ichi

Year:

2011

Language:

english

File:

PDF, 138 KB

english, 2011

74

[IEEE 2013 Digital Heritage International Congress (DigitalHeritage) - Marseille, France (2013.10.28-2013.11.1)] 2013 Digital Heritage International Congress (DigitalHeritage) - News search using discourse analytics

Thompson, Paul, Nawaz, Raheel, Korkontzelos, Ioannis, Black, William, McNaught, John, Ananiadou, Sophia

Year:

2013

Language:

english

File:

PDF, 2.35 MB

english, 2013

75

UKPMC: a full text article resource for the life sciences

McEntyre, J. R., Ananiadou, S., Andrews, S., Black, W. J., Boulderstone, R., Buttery, P., Chaplin, D., Chevuru, S., Cobley, N., Coleman, L.-A., Davey, P., Gupta, B., Haji-Gholam, L., Hawkins, C., Horn

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 7.34 MB

english, 2011

76

Basic skills and workplace learning: what do we actually know about their benefits?

Ananiadou, Katerina, Jenkins, Andrew, Wolf *, Alison

Journal:

Studies in Continuing Education

Year:

2004

Language:

english

File:

PDF, 131 KB

english, 2004

77

Event-based text mining for biology and functional genomics

Ananiadou, S., Thompson, P., Nawaz, R., McNaught, J., Kell, D. B.

Journal:

Briefings in Functional Genomics

Year:

2015

Language:

english

File:

PDF, 1.67 MB

english, 2015

78

THE VALUE OF AN IN-DOMAIN LEXICON IN GENOMICS QA

SASAKI, YUTAKA, MCNAUGHT, JOHN, ANANIADOU, SOPHIA

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2010

Language:

english

File:

PDF, 290 KB

english, 2010

79

RECOGNISING DISCOURSE CAUSALITY TRIGGERS IN THE BIOMEDICAL DOMAIN

MIHĂILĂ, CLAUDIU, ANANIADOU, SOPHIA

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2013

Language:

english

File:

PDF, 382 KB

english, 2013

80

Anatomical entity mention recognition at literature scale

Pyysalo, S., Ananiadou, S.

Journal:

Year:

2014

Language:

english

File:

PDF, 343 KB

english, 2014

81

Reducing systematic review workload through certainty-based screening

Miwa, Makoto, Thomas, James, O’Mara-Eves, Alison, Ananiadou, Sophia

Journal:

Journal of Biomedical Informatics

Year:

2014

Language:

english

File:

PDF, 2.88 MB

english, 2014

82

Automatic extraction of angiogenesis bioprocess from text

Wang, X., McKendrick, I., Barrett, I., Dix, I., French, T., Tsujii, J., Ananiadou, S.

Journal:

Year:

2011

Language:

english

File:

PDF, 257 KB

english, 2011

83

Aortic root aneurysm in an adult patient with aortic coarctation: a single-stage approach

Ananiadou, O. G., Koutsogiannidis, C., Ampatzidou, F., Drossos, G. E.

Journal:

Interactive Cardiovascular and Thoracic Surgery

Year:

2012

Language:

english

File:

PDF, 112 KB

english, 2012

84

FACTA: a text search engine for finding associated biomedical concepts

Tsuruoka, Y., Tsujii, J., Ananiadou, S.

Journal:

Year:

2008

Language:

english

File:

PDF, 173 KB

english, 2008

85

Text mining meets workflow: linking U-Compare with Taverna

Kano, Y., Dobson, P., Nakanishi, M., Tsujii, J., Ananiadou, S.

Journal:

Year:

2010

Language:

english

File:

PDF, 173 KB

english, 2010

86

Boosting automatic event extraction from the literature using domain adaptation and coreference resolution

Miwa, M., Thompson, P., Ananiadou, S.

Journal:

Year:

2012

Language:

english

File:

PDF, 786 KB

english, 2012

87

Event extraction across multiple levels of biological organization

Pyysalo, S., Ohta, T., Miwa, M., Cho, H.-C., Tsujii, J., Ananiadou, S.

Journal:

Year:

2012

Language:

english

File:

PDF, 338 KB

english, 2012

88

Tailoring Noninvasive Ventilation Management in Non-ICU Settings and the Cardiac Surgery Context

Koutsogiannidis, C.-P. C., Ananiadou, O. G.

Journal:

Respiratory Care

Year:

2014

Language:

english

File:

PDF, 14 KB

english, 2014

89

Supporting Systematic Reviews Using Text Mining

Ananiadou, S., Rea, B., Okazaki, N., Procter, R., Thomas, J.

Journal:

Social Science Computer Review

Year:

2009

Language:

english

File:

PDF, 592 KB

english, 2009

90

Supporting the annotation of chronic obstructive pulmonary disease (COPD) phenotypes with text mining workflows

Fu, Xiao, Batista-Navarro, Riza, Rak, Rafal, Ananiadou, Sophia

Journal:

Journal of Biomedical Semantics

Year:

2015

Language:

english

File:

PDF, 1018 KB

english, 2015

91

Local iodine pleurodesis versus thoracoscopic talc insufflation in recurrent malignant pleural effusion: a prospective randomized control trial☆

Mohsen, Tarek A., Zeid, Amany A. Abou, Meshref, Mohamed, Tawfeek, Nehad, Redmond, Karen, Ananiadou, Olga G., Haj-Yahia, Saleem

Journal:

European Journal of Cardio-Thoracic Surgery

Year:

2010

Language:

english

File:

PDF, 95 KB

english, 2010

92

Processing biological literature with customizable Web services supporting interoperable formats

Rak, R., Batista-Navarro, R. T., Carter, J., Rowley, A., Ananiadou, S.

Journal:

Year:

2014

Language:

english

File:

PDF, 365 KB

english, 2014

93

Endovascular repair of traumatic aortic transection

Chalvatzoulis, E., Megalopoulos, A., Trellopoulos, G., Ananiadou, O., Papoulidis, P., Kemanetzi, I., Madesis, A., Drossos, G.

Journal:

Interactive Cardiovascular and Thoracic Surgery

Year:

2010

Language:

english

File:

PDF, 692 KB

english, 2010

94

Descriptive document clustering via discriminant learning in a co-embedded space of multilevel similarities

Mu, Tingting, Goulermas, John Y., Korkontzelos, Ioannis, Ananiadou, Sophia

Journal:

Journal of the Association for Information Science and Technology

Year:

2015

Language:

english

File:

PDF, 5.94 MB

english, 2015

95

Operative stabilization of skeletal chest injuries secondary to cardiopulmonary resuscitation in a cardiac surgical patient

Ananiadou, O., Karaiskos, T., Givissis, P., Drossos, G.

Journal:

Interactive Cardiovascular and Thoracic Surgery

Year:

2010

Language:

english

File:

PDF, 345 KB

english, 2010

96

PathText: a text mining integrator for biological pathway visualizations

Kemper, B., Matsuzaki, T., Matsuoka, Y., Tsuruoka, Y., Kitano, H., Ananiadou, S., Tsujii, J.

Journal:

Year:

2010

Language:

english

File:

PDF, 856 KB

english, 2010

97

Terminology-driven mining of biomedical literature

Nenadic, G., Spasic, I., Ananiadou, S.

Journal:

Year:

2003

Language:

english

File:

PDF, 68 KB

english, 2003

98

A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text

Miwa, M., Ohta, T., Rak, R., Rowley, A., Kell, D. B., Pyysalo, S., Ananiadou, S.

Journal:

Year:

2013

Language:

english

File:

PDF, 335 KB

english, 2013

99

Discovering and visualizing indirect associations between biomedical concepts

Tsuruoka, Y., Miwa, M., Hamamoto, K., Tsujii, J., Ananiadou, S.

Journal:

Year:

2011

Language:

english

File:

PDF, 965 KB

english, 2011

100

MaSTerClass: a case-based reasoning system for the classification of biomedical terms

Spasic, I., Ananiadou, S., Tsujii, J.

Journal:

Year:

2005

Language:

english

File:

PDF, 130 KB

english, 2005