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101

Base composition bias might result from competition for metabolic resources

Eduardo P.C. Rocha, Antoine Danchin

Journal:

Trends in Genetics

Year:

2002

Language:

english

File:

PDF, 43 KB

english, 2002

102

From protein sequence to function

Antoine Danchin

Journal:

Current Opinion in Structural Biology

Year:

1999

Language:

english

File:

PDF, 634 KB

english, 1999

103

Re-annotation of genome microbial CoDing-Sequences: finding new genes and inaccurately annotated genes

Stéphanie Bocs, Antoine Danchin, Claudine Médigue

Journal:

BMC Bioinformatics

Year:

2002

Language:

english

File:

PDF, 441 KB

english, 2002

104

Relationship of SARS-CoV to other pathogenic RNA viruses explored by tetranucleotide usage profiling

Yee Leng Yap, Xue Wu Zhang, Antoine Danchin

Journal:

BMC Bioinformatics

Year:

2003

Language:

english

File:

PDF, 694 KB

english, 2003

105

Genomes are covered with ubiquitous 11 bp periodic patterns, the "class A flexible patterns"

Etienne Larsabal, Antoine Danchin

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 470 KB

english, 2005

106

Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes

Yuko Makita, Michiel JL de Hoon, Antoine Danchin

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 340 KB

english, 2007

107

Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli

Ye Jin, Rory M Watt, Antoine Danchin, Jian-dong Huang

Journal:

Year:

2009

Language:

english

File:

PDF, 387 KB

english, 2009

108

Specialized microbial databases for inductive exploration of microbial genome sequences

Gang Fang, Christine Ho, Yaowu Qiu, Virginie Cubas, Zhou Yu, Cédric Cabau, Frankie Cheung, Ivan Moszer, Antoine Danchin

Journal:

Year:

2005

Language:

english

File:

PDF, 823 KB

english, 2005

109

Conserved genes in a path from commensalism to pathogenicity: comparative phylogenetic profiles ofStaphylococcus epidermidisRP62A and ATCC12228

Wu Wei, ZhiWei Cao, Yu-Li Zhu, XiaoJing Wang, GuoHui Ding, Hao Xu, PeiLin Jia, Di Qu, Antoine Danchin, YiXue Li

Journal:

Year:

2006

Language:

english

File:

PDF, 356 KB

english, 2006

110

Genomics of an extreme psychrophile,Psychromonas ingrahamii

Monica Riley, James T Staley, Antoine Danchin, Ting Zhang Wang, Thomas S Brettin, Loren J Hauser, Miriam L Land, Linda S Thompson

Journal:

Year:

2008

Language:

english

File:

PDF, 574 KB

english, 2008

111

Persistence drives gene clustering in bacterial genomes

Gang Fang, Eduardo PC Rocha, Antoine Danchin

Journal:

Year:

2008

Language:

english

File:

PDF, 772 KB

english, 2008

112

MtnK, methylthioribose kinase, is a starvation-induced protein in Bacillus subtilis

Agnieszka Sekowska, Laurence Mulard, Susanne Krogh, Jane KS Tse, Antoine Danchin

Journal:

BMC Microbiology

Year:

2001

Language:

english

File:

PDF, 1.18 MB

english, 2001

113

Decrypting the H-NS-dependent regulatory cascade of acid stress resistance inEscherichia coli

Evelyne Krin, Antoine Danchin, Olga Soutourina

Journal:

BMC Microbiology

Year:

2010

Language:

english

File:

PDF, 854 KB

english, 2010

114

The methionine salvage pathway inBacillus subtilis

Agnieszka Sekowska, Antoine Danchin

Journal:

BMC Microbiology

Year:

2002

Language:

english

File:

PDF, 1.59 MB

english, 2002

115

Bacterial variations on the methionine salvage pathway

Agnieszka Sekowska, Valérie Dénervaud, Hiroki Ashida, Karine Michoud, Dieter Haas, Akiho Yokota, Antoine Danchin

Journal:

BMC Microbiology

Year:

2004

Language:

english

File:

PDF, 3.30 MB

english, 2004

116

The two authentic methionine aminopeptidase genes are differentially expressed inBacillus subtilis

CongHui You, HongYan Lu, Agnieszka Sekowska, Gang Fang, YiPing Wang, Anne-Marie Gilles, Antoine Danchin

Journal:

BMC Microbiology

Year:

2005

Language:

english

File:

PDF, 1.66 MB

english, 2005

117

Structure-based discovery of inhibitors of the YycG histidine kinase: New chemical leads to combatStaphylococcus epidermidisinfections

Zhiqiang Qin, Jian Zhang, Bin Xu, Lili Chen, Yang Wu, Xiaomei Yang, Xu Shen, Soeren Molin, Antoine Danchin, Hualiang Jiang, Di Qu

Journal:

BMC Microbiology

Year:

2006

Language:

english

File:

PDF, 888 KB

english, 2006

118

Spx mediates oxidative stress regulation of the methionine sulfoxide reductases operon inBacillus subtilis

CongHui You, Agnieszka Sekowska, Olivera Francetic, Isabelle Martin-Verstraete, YiPing Wang, Antoine Danchin

Journal:

BMC Microbiology

Year:

2008

Language:

english

File:

PDF, 637 KB

english, 2008

119

Classification between normal and tumor tissues based on the pair-wise gene expression ratio

YeeLeng Yap, XueWu Zhang, MT Ling, XiangHong Wang, YC Wong, Antoine Danchin

Journal:

Year:

2004

Language:

english

File:

PDF, 463 KB

english, 2004

120

Cooperative Binding of Manganese (II) to Transfer RNA

Antoine Danchin, Maurice Guèron

Journal:

Year:

1970

Language:

english

File:

PDF, 451 KB

english, 1970

121

On the Binding of tRNA to Escherichia coli RNA Polymerase

Annick SPASSKY, Stephen J. W. BUSBY, Antoine DANCHIN, Henri BUC

Journal:

Year:

1979

Language:

english

File:

PDF, 1.64 MB

english, 1979

122

Isolation and characterization of catalytic and calmodulin-binding domains of Bordetella pertussis adenylate cyclase

Hélène MUNIER, Anne-Marie GILLES, Philippe GLASER, Evelyne KRIN, Antoine DANCHIN, Robert SARFATI, Octavian BÂRZU

Journal:

Year:

1991

Language:

english

File:

PDF, 675 KB

english, 1991

123

Structural flexibility of the calmodulin-binding locus in Bordetella pertussis adenylate cyclase : Reconstitution of catalytically active species from fragments or inactive forms of the enzyme

Hélène MUNIER, Ahmed BOUHSS, Anne-Marie GILLES, Evelyne KRIN, Philippe GLASER, Antoine DANCHIN, Octavian BÂRZU

Journal:

Year:

1993

Language:

english

File:

PDF, 666 KB

english, 1993

124

Structural and physico-chemical characteristics of Bordetella pertussis adenylate kinase, a tryptophan-containing enzyme

Anne-Marie GILLES, Odile SISMEIRO, Hélène MUNIER, Heinz FABIAN, Henry H. MANTSCH, Witold K. SUREWICZ, Constantin C. CRAESCU, Octavian BARZU, Antoine DANCHIN

Journal:

Year:

1993

Language:

english

File:

PDF, 875 KB

english, 1993

125

Conformational Transitions within the Calmodulin-Binding Site of Bordetella pertussis Adenylate Cyclase Studied by Time-Resolved Fluorescence of Trp242 and Circular Dichroism

Ahmed Bouhss, Michel Vincent, Hélène Munier, Anne-Marie Gilles, Masayuchi Takahashi, Octavian Bârzu, Antoine Danchin, Jacques Gallay

Journal:

Year:

1996

Language:

english

File:

PDF, 1.09 MB

english, 1996

126

Role of Escherichia Coli Histone-Like Nucleoid-Structuring Protein in Bacterial Metabolism and Stress Response : Identification of Targets by Two-Dimensional Electrophoresis

Christine Laurent-Winter, Saravuth Ngo, Antoine Danchin, Philippe Bertin

Journal:

Year:

1997

Language:

english

File:

PDF, 853 KB

english, 1997

127

Linking selenium biogeochemistry to the sulfur-dependent biological detoxification of arsenic

Raoul-Marie Couture, Agnieszka Sekowska, Gang Fang, Antoine Danchin

Journal:

Environmental Microbiology

Year:

2012

Language:

english

File:

PDF, 315 KB

english, 2012

128

Functional analysis of subunits III and IV of Bacillus subtilis aa3-600 quinol oxidase by in vitro mutagenesis and gene replacement

Gaetano Villani, Maria Tattoli, Nazzareno Capitanio, Philippe Glaser, Sergio Papa, Antoine Danchin

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1995

Language:

english

File:

PDF, 690 KB

english, 1995

129

Specific interaction of cobaltic complexes with myosin

Avraham Oplatka, Moshe M. Werber, Antoine Danchin

Journal:

Year:

1974

Language:

english

File:

PDF, 401 KB

english, 1974

130

From adenylate cyclase to guanylate cyclase: Mutational analysis of a change in substrate specificity

Annie Beuve, Antoine Danchin

Journal:

Journal of Molecular Biology

Year:

1992

Language:

english

File:

PDF, 789 KB

english, 1992

131

Cloning and sequence of the Bordetella bronchiseptica adenylate cyclase-hemolysin-encoding gene: comparison with the Bordetella pertussis gene

Fotini Betsou, Odile Sismeiro, Antoine Danchin, Nicole Guiso

Journal:

Year:

1995

Language:

english

File:

PDF, 196 KB

english, 1995

132

Identification of genes and proteins involved in the pleiotropic response to arsenic stress in Caenibacter arsenoxydans, a metalloresistant beta-proteobacterium with an unsequenced genome

Christine Carapito, Daniel Muller, Evelyne Turlin, Sandrine Koechler, Antoine Danchin, Alain Van Dorsselaer, Emmanuelle Leize-Wagner, Philippe N. Bertin, Marie-Claire Lett

Journal:

Year:

2006

Language:

english

File:

PDF, 549 KB

english, 2006

133

The metNPQ operon of Bacillus subtilis encodes an ABC permease transporting methionine sulfoxide, d- and l-methionine

Marie-Françoise Hullo, Sandrine Auger, Elie Dassa, Antoine Danchin, Isabelle Martin-Verstraete

Journal:

Research in Microbiology

Year:

2004

Language:

english

File:

PDF, 234 KB

english, 2004

134

Was photosynthetic RuBisCO recruited by acquisitive evolution from RuBisCO-like proteins involved in sulfur metabolism?

Hiroki Ashida, Antoine Danchin, Akiho Yokota

Journal:

Research in Microbiology

Year:

2005

Language:

english

File:

PDF, 575 KB

english, 2005

135

3-phenylpropionate catabolism and the Escherichia coli oxidative stress response

Evelyne Turlin, Odile Sismeiro, Jean Pierre Le Caer, Valérie Labas, Antoine Danchin, Francis Biville

Journal:

Research in Microbiology

Year:

2005

Language:

english

File:

PDF, 324 KB

english, 2005

136

RcsB plays a central role in H-NS-dependent regulation of motility and acid stress resistance in Escherichia coli

Evelyne Krin, Antoine Danchin, Olga Soutourina

Journal:

Research in Microbiology

Year:

2010

Language:

english

File:

PDF, 706 KB

english, 2010

137

Sulphur islands in the Escherichia coli genome: markers of the cell’s architecture?

Eduardo P.C. Rocha, Agnieszka Sekowska, Antoine Danchin

Journal:

Year:

2000

Language:

english

File:

PDF, 135 KB

english, 2000

138

Quel sens ont nos séquences ? De la fonction à la structure, l'apport de la génomique

Par Antoine Danchin

Journal:

Year:

1999

Language:

french

File:

PDF, 919 KB

french, 1999

139

H-NS and H-NS-like proteins in Gram-negative bacteria andtheir multiple role in the regulation of bacterial metabolism

Philippe Bertin, Florence Hommais, Evelyne Krin, Olga Soutourina, Christian Tendeng, Sylviane Derzelle, Antoine Danchin

Journal:

Year:

2001

Language:

english

File:

PDF, 347 KB

english, 2001

140

Pyrophosphate increases the efficiency of enterobactin-dependent iron uptake in Escherichia coli

Marina Perrotte-Piquemal, Antoine Danchin, Francis Biville

Journal:

Year:

1999

Language:

english

File:

PDF, 324 KB

english, 1999

141

Description and application of a rapid method for genomic DNA direct sequencing

Evelyne Krin, Florence Hommais, Olga Soutourina, Saravuth Ngo, Antoine Danchin, Philippe Bertin

Journal:

FEMS Microbiology Letters

Year:

2001

Language:

english

File:

PDF, 356 KB

english, 2001

142

The DNA secondary structure of the Bacillus subtilis genome

Valentina Tosato, Kresimir Gjuracic, Kristian Vlahovicek, Sandor Pongor, Antoine Danchin, Carlo V Bruschi

Journal:

FEMS Microbiology Letters

Year:

2003

Language:

english

File:

PDF, 361 KB

english, 2003

143

Mapping of repetitive and non-repetitive DNA probes to chromosomes of the microsporidian Encephalitozoon cuniculi

Corinne Biderre, Francis Duffieux, Eric Peyretaillade, Philippe Glaser, Pierre Peyret, Antoine Danchin, Michel Pagès, Guy Méténier, Christian P Vivarès

Journal:

Year:

1997

Language:

english

File:

PDF, 187 KB

english, 1997

144

Just so genome stories: what does my neighbor tell me?

Stanislas Noria, Antoine Danchin

Journal:

International Congress Series

Year:

2002

Language:

english

File:

PDF, 183 KB

english, 2002

145

Functional and evolutionary roles of long repeats in prokaryotes

Eduardo P.C Rocha, Antoine Danchin, Alain Viari

Journal:

Research in Microbiology

Year:

1999

Language:

english

File:

PDF, 210 KB

english, 1999

146

The map of the cell is in the chromosome

Antoine Danchin, Alain Hénaut

Journal:

Current Opinion in Genetics & Development

Year:

1997

Language:

english

File:

PDF, 267 KB

english, 1997

147

Bacterial DNA strand compositional asymmetry: Response

Eduardo P.C Rocha, Antoine Danchin, Alan Viari

Journal:

Trends in Microbiology

Year:

1999

Language:

english

File:

PDF, 102 KB

english, 1999

148

Codon usage and lateral gene transfer in Bacillus subtilis

Ivan Moszer, Eduardo PC Rocha, Antoine Danchin

Journal:

Current Opinion in Microbiology

Year:

1999

Language:

english

File:

PDF, 122 KB

english, 1999

149

A rapid test for the rel a mutation in E. coli

Marc Uzan, Antoine Danchin

Journal:

Biochemical and Biophysical Research Communications

Year:

1976

Language:

english

File:

PDF, 1.34 MB

english, 1976

150

Modulation of the lactose operon mRNA turnover by inhibitors of dihydrofolate reductase

Evelyne Joseph, Antoine Danchin, Agnes Ullmann

Journal:

Biochemical and Biophysical Research Communications

Year:

1978

Language:

english

File:

PDF, 418 KB

english, 1978

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