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51

The structure of a pseudo intercalated complex between actinomycin and the DNA binding sequence d(GpC)

Takusagawa, Fusao, Dabrow, Michael, Neidle, Stephen, Berman, Helen M.

Journal:

Year:

1982

File:

PDF, 653 KB

1982

52

Safeguarding the integrity of protein archive

Berman, Helen M., Kleywegt, Gerard J., Nakamura, Haruki, Markley, John L., Burley, Stephen K.

Journal:

Year:

2010

Language:

english

File:

PDF, 342 KB

english, 2010

53

10.1038/80734

Berman, Helen M., Bhat, T. N., Bourne, Philip E., Feng, Zukang, Gilliland, Gary, Weissig, Helge, Westbrook, John

Journal:

Natural Structural Biology

Year:

2000

Language:

english

File:

PDF, 166 KB

english, 2000

54

10.1038/8259

Berman, Helen M., Kramer, Rachel Z., Bella, Jordi, Mayville, Patricia, Brodsky, Barbara

Journal:

Natural Structural Biology

Year:

1999

Language:

english

File:

PDF, 317 KB

english, 1999

55

Realism about PDB

Berman, Helen M, Henrick, Kim, Nakamura, Haruki, Markley, John, Bourne, Philip E, Westbrook, John

Journal:

Nature Biotechnology

Year:

2007

Language:

english

File:

PDF, 150 KB

english, 2007

56

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Deutsch, Eric W, Ball, Catherine A, Berman, Jules J, Bova, G Steven, Brazma, Alvis, Bumgarner, Roger E, Campbell, David, Causton, Helen C, Christiansen, Jeffrey H, Daian, Fabrice

Journal:

Nature Biotechnology

Year:

2008

Language:

english

File:

PDF, 249 KB

english, 2008

57

Aromatic hydrogen bond in sequence-specific protein DNA recognition

Berman, Helen, Ebright, Richard H., Parkinson, Gary, Gunasekera, Angelo, Vojtechovsky, Jaroslav, Zhang, Xiaoping, Kunkel, Thomas A.

Journal:

Natural Structural Biology

Year:

1996

File:

PDF, 684 KB

1996

58

Announcing the worldwide Protein Data Bank

Berman, Helen, Henrick, Kim, Nakamura, Haruki

Journal:

Natural Structural Biology

Year:

2003

Language:

english

File:

PDF, 60 KB

english, 2003

59

Crystal structure of the unique RNA-binding domain of the influenza virus NS1 protein

Liu, Jinsong, Lynch, Patricia A., Chien, Chen-ya, Montelione, Gaetano T., Krug, Robert M., Berman, Helen M.

Journal:

Natural Structural Biology

Year:

1997

File:

PDF, 612 KB

1997

60

Reply to: Is one solution good enough?

Berman, Helen M, Henrick, Kim, Nakamura, Haruki, Arnold, Eddy

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 66 KB

english, 2006

61

Reply to: Building meaningful models of glycoproteins

Berman, Helen M., Henrick, Kim, Nakamura, Haruki, Markley, John

Journal:

Nature Structural and Molecular Biology

Year:

2007

Language:

english

File:

PDF, 85 KB

english, 2007

62

Reply to "Giving credit where credit is due"

Berman, Helen M.

Journal:

Nature Structural and Molecular Biology

Year:

2005

Language:

english

File:

PDF, 65 KB

english, 2005

63

Diverse Research on Alcohol and Aggression in Humans: In Memory of John A. Carpenter

Peter R. Giancola, Helene Raskin White, Mitchell E. Berman, Michael S. McCloskey, Tammy F. Greer, Cathy Spatz Widom, Stephen T. Chermack, Kenneth E. Leonard, R. Lorraine Collins, Brian M. Quigley

Journal:

Alcoholism: Clinical and Experimental Research

Year:

2003

Language:

english

File:

PDF, 99 KB

english, 2003

64

The Protein Structure Initiative Structural Biology Knowledgebase Technology Portal: a structural biology web resource

Lida K. Gifford, Lester G. Carter, Margaret J. Gabanyi, Helen M. Berman, Paul D. Adams

Journal:

Journal of Structural and Functional Genomics

Year:

2012

Language:

english

File:

PDF, 531 KB

english, 2012

65

The 2010 cryo-em modeling challenge

Steven J. Ludtke, Catherine L. Lawson, Gerard J. Kleywegt, Helen Berman, Wah Chiu

Journal:

Year:

2012

Language:

english

File:

PDF, 783 KB

english, 2012

66

Book reviews

Garvin, S. Eugene Barrera, R. W. Bohn, Harold H. Berman, T. W. Forbes, Hester B. Crutcher, Landis, Brown, Ralph Horn, Helen V. Clune, Pollock, Alice W. Goddard, Sara L. Smalley, Sanger Brown, Ethel B.

Journal:

Psychiatric Quarterly

Year:

1933

Language:

english

File:

PDF, 2.22 MB

english, 1933

67

Interleukin 6 modulates c-sis gene expression in cultured human endothelial cells

Tina M. Calderon, Jeffrey Sherman, Helen Wilkerson, Victor B. Hatcher, Joan W. Berman

Journal:

Cellular Immunology

Year:

1992

Language:

english

File:

PDF, 912 KB

english, 1992

68

Catabolite activator protein: DNA binding and transcription activation

Catherine L Lawson, David Swigon, Katsuhiko S Murakami, Seth A Darst, Helen M Berman, Richard H Ebright

Journal:

Current Opinion in Structural Biology

Year:

2004

Language:

english

File:

PDF, 642 KB

english, 2004

69

E. coli trp Repressor Forms a Domain-Swapped Array in Aqueous Alcohol

Catherine L Lawson, Brian Benoff, Tatyana Berger, Helen M Berman, Jannette Carey

Journal:

Year:

2004

Language:

english

File:

PDF, 603 KB

english, 2004

70

Large Macromolecular Complexes in the Protein Data Bank: A Status Report

Shuchismita Dutta, Helen M. Berman

Journal:

Year:

2005

Language:

english

File:

PDF, 479 KB

english, 2005

71

Outcome of a Workshop on Archiving Structural Models of Biological Macromolecules

Helen M. Berman, Stephen K. Burley, Wah Chiu, Andrej Sali, Alexei Adzhubei, Philip E. Bourne, Stephen H. Bryant, Roland L. Dunbrack Jr., Krzysztof Fidelis, Joachim Frank, Adam Godzik, Kim Henrick, And

Journal:

Year:

2006

Language:

english

File:

PDF, 162 KB

english, 2006

72

Harnessing Knowledge from Structural Genomics

Helen M. Berman

Journal:

Year:

2008

Language:

english

File:

PDF, 103 KB

english, 2008

73

Outcome of a Workshop on Applications of Protein Models in Biomedical Research

Torsten Schwede, Andrej Sali, Barry Honig, Michael Levitt, Helen M. Berman, David Jones, Steven E. Brenner, Stephen K. Burley, Rhiju Das, Nikolay V. Dokholyan, Roland L. Dunbrack Jr., Krzysztof Fideli

Journal:

Year:

2009

Language:

english

File:

PDF, 249 KB

english, 2009

74

The Protein Data Bank at 40: Reflecting on the Past to Prepare for the Future

Helen M. Berman, Gerard J. Kleywegt, Haruki Nakamura, John L. Markley

Journal:

Year:

2012

Language:

english

File:

PDF, 1.22 MB

english, 2012

75

Nucleic acid crystallography: A view from the nucleic acid database

Helen M. Berman, Anke Gelbin, John Westbrook

Journal:

Progress in Biophysics and Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.82 MB

english, 1996

76

Effects of Lead Exposure on GnRH and LH Secretion In Male Rats: Response to Castration and α-methyl-p-tyrosine (AMPT) Challenge

Rebecca Z Sokol, Nancy Berman, Helen Okuda, William Raum

Journal:

Reproductive Toxicology

Year:

1998

Language:

english

File:

PDF, 2.38 MB

english, 1998

77

Integrin–collagen complex: a metal–glutamate handshake

Jordi Bella, Helen M Berman

Journal:

Year:

2000

Language:

english

File:

PDF, 357 KB

english, 2000

78

Hydration structure of a collagen peptide

Jordi Bella, Barbara Brodsky, Helen M Berman

Journal:

Year:

1995

Language:

english

File:

PDF, 1.56 MB

english, 1995

79

New guidelines for deposition of nucleic acid structures

Joel L Sussman, Helen M Berman

Journal:

Year:

1995

Language:

english

File:

PDF, 77 KB

english, 1995

80

Nanophthalmos in a Melanesian population

Tien Tay, James EH Smith, Yemima Berman, Lesley Adès, Isabelle Missotte, Hēlène Saglibène, Frank Martin, Paul Mitchell, David Taylor

Journal:

Clinical & Experimental Ophthalmology

Year:

2007

Language:

english

File:

PDF, 213 KB

english, 2007

81

Crystal and molecular structure of N-methyl-N-tert-butyl-3-hydroxyazetidinium methanesulfonate, a nonplanar azetidinium ring

McGandy, E. L., Berman, Helen Miriam, Burgner, John W., VanEtten, Robert L.

Journal:

Journal of the American Chemical Society

Year:

1969

Language:

english

File:

PDF, 618 KB

english, 1969

82

Structure of the CAP-DNA Complex at 2.5 Å Resolution: A Complete Picture of the Protein-DNA Interface

Gary Parkinson, Christopher Wilson, Angelo Gunasekera, Yon W. Ebright, Richard E. Ebright, Helen M. Berman

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 591 KB

english, 1996

83

Crystallographic Evidence for Cα–H···O=C Hydrogen Bonds in a Collagen Triple Helix

Jordi Bella, Helen M. Berman

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.86 MB

english, 1996

84

X-ray crystallographic determination of a collagen-like peptide with the repeating sequence (Pro-Pro-Gly)

Rachel Z Kramer, Luigi Vitagliano, Jordi Bella, Rita Berisio, Lelio Mazzarella, Barbara Brodsky, Adriana Zagari, Helen M Berman

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 1.59 MB

english, 1998

85

The crystal structure of an autoprocessed Ser221Cys-subtilisin E-propeptide complex at 2.0 å resolution

Shri C Jain, Ujwal Shinde, Yuyun Li, Masayori Inouye, Helen M Berman

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 555 KB

english, 1998

86

Protein-DNA interactions: a structural analysis

Susan Jones, Paul van Heyningen, Helen M. Berman, Janet M. Thornton

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 637 KB

english, 1999

87

Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair

Rachel Z Kramer, Manju G Venugopal, Jordi Bella, Patricia Mayville, Barbara Brodsky, Helen M Berman

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 815 KB

english, 2000

88

Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: alteration of DNA binding specificity through alteration of DNA kinking

Shengfeng Chen, Angelo Gunasekera, Xiaoping Zhang, Thomas A Kunkel, Richard H Ebright, Helen M Berman

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 865 KB

english, 2001

89

Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: DNA binding specificity based on energetics of DNA kinking

Shengfeng Chen, Jaroslav Vojtechovsky, Gary N Parkinson, Richard H Ebright, Helen M Berman

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 1.46 MB

english, 2001

90

Netropsin, a DNA-binding oligopeptide structural and binding studies

Helen M Berman, S Neidle, C Zimmer, H Thrum

Journal:

Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis

Year:

1979

Language:

english

File:

PDF, 361 KB

english, 1979

91

Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP–DNA Complex: Recognition of Pyrimidine-Purine and Purine-Purine Steps

Andrew A. Napoli, Catherine L. Lawson, Richard H. Ebright, Helen M. Berman

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 736 KB

english, 2006

92

Conformational Effects of Gly–X–Gly Interruptions in the Collagen Triple Helix

Jordi Bella, Jingsong Liu, Rachel Kramer, Barbara Brodsky, Helen M. Berman

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 1.23 MB

english, 2006

93

Signatures of Protein-DNA Recognition in Free DNA Binding Sites

Jason W. Locasale, Andrew A. Napoli, Shengfeng Chen, Helen M. Berman, Catherine L. Lawson

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 790 KB

english, 2009

94

Erratum to “Structure of the CAP–DNA Complex at 2.5 Å Resolution: A Complete Picture of the Protein–DNA Interface” [J. Mol. Biol. 260/3 (1996) 395–408]

Gary Parkinson, Christopher Wilson, Angelo Gunasekera, Yon W. Ebright, Richard H. Ebright, Helen M. Berman

Journal:

Journal of Molecular Biology

Year:

2011

File:

PDF, 70 KB

2011

95

Statistical Models for Discerning Protein Structures Containing the DNA-binding Helix-Turn-Helix Motif

William A. McLaughlin, Helen M. Berman

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 546 KB

english, 2003

96

Diagnosis of gastrointestinal stromal tumors: A consensus approach

Christopher D.M. Fletcher, Jules J. Berman, Christopher Corless, Fred Gorstein, Jerzy Lasota, B.Jack Longley, Markku Miettinen, Timothy J. O'Leary, Helen Remotti, Brian P. Rubin, Barry Shmookler, Lesl

Journal:

Human Pathology

Year:

2002

Language:

english

File:

PDF, 395 KB

english, 2002

97

X-ray crystallographic studies of nucleic acids and nucleic acid-drug complexes

Stephen Neidle, Helen M. Berman

Journal:

Progress in Biophysics and Molecular Biology

Year:

1983

Language:

english

File:

PDF, 1.49 MB

english, 1983

98

Effect of catecholamine depletion on lithium-induced long-term remission of bipolar disorder

Amit Anand, Adam Darnell, Helen L Miller, Robert M Berman, Angela Cappiello, Dan A Oren, Scott W Woods, Dennis S Charney

Journal:

Biological Psychiatry

Year:

1999

Language:

english

File:

PDF, 165 KB

english, 1999

99

The use of pindolol with fluoxetine in the treatment of major depression: final results from a double-blind, placebo-controlled trial

Robert M Berman, Amit Anand, Angela Cappiello, Helen L Miller, X.Sylvia Hu, Dan A Oren, Dennis S Charney

Journal:

Biological Psychiatry

Year:

1999

Language:

english

File:

PDF, 239 KB

english, 1999

100

Hydration of Nucleic Acid Crystals

HELEN M. BERMAN

Journal:

Annals of the New York Academy of Sciences

Year:

1986

Language:

english

File:

PDF, 929 KB

english, 1986