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1

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 October 2011 – 30 November 2011

Molecular Ecology Resources Primer Development Consortium, ALUANA G. ABREU, A. ALBAINA, TILMAN J. ALPERMANN, VANESSA E. APKENAS, S. BANKHEAD-DRONNET, SARA BERGEK, MICHAEL L. BERUMEN, CHANG-HUNG CHO, J

Journal:

Molecular Ecology Resources

Year:

2012

Language:

english

File:

PDF, 94 KB

english, 2012

2

Aqua-Fi: Delivering Internet Underwater Using Wireless Optical Networks

Shihada, Basem, Amin, Osama, Bainbridge, Christopher, Jardak, Seifallah, Alkhazragi, Omar, Ng, Tien Khee, Ooi, Boon, Berumen, Michael, Alouini, Mohamed-Slim

Journal:

IEEE Communications Magazine

Year:

2020

File:

PDF, 738 KB

2020

3

The abundance of herbivorous fish on an inshore Red Sea reef following a mass coral bleaching event

Khalil, Maha T., Cochran, Jesse E. M., Berumen, Michael L.

Journal:

Environmental Biology of Fishes

Year:

2013

Language:

english

File:

PDF, 357 KB

english, 2013

4

First record of the Pigeye Shark, Carcharhinus amboinensis (Müller & Henle, 1839) (Carcharhiniformes: Carcharhinidae), in the Red Sea

Spaet, Julia L. Y., Cochran, Jesse E. M., Berumen, Michael L.

Journal:

Zoology in the Middle East

Year:

2011

Language:

english

File:

PDF, 95 KB

english, 2011

5

Rapid adaptive responses to climate change in corals

Torda, Gergely, Donelson, Jennifer M., Aranda, Manuel, Barshis, Daniel J., Bay, Line, Berumen, Michael L., Bourne, David G., Cantin, Neal, Foret, Sylvain, Matz, Mikhail, Miller, David J., Moya, Aureli

Journal:

Nature Climate Change

Year:

2017

Language:

english

File:

PDF, 2.06 MB

english, 2017

6

The complete mitochondrial genome of Porites harrisoni (Cnidaria: Scleractinia) obtained using next-generation sequencing

Terraneo, Tullia Isotta, Arrigoni, Roberto, Benzoni, Francesca, Forsman, Zac H., Berumen, Michael L.

Journal:

Mitochondrial DNA Part B

Year:

2018

Language:

english

File:

PDF, 909 KB

english, 2018

7

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || Automatic Path Planning for Unmanned Ground Vehicle Using UAV Imagery

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 1.22 MB

english, 2019

8

Phylogenetic relationships among the clownfish-hosting sea anemones

Titus, Benjamin M., Benedict, Charlotte, Laroche, Robert, Gusmão, Luciana C., Van Deusen, Vanessa, Chiodo, Tommaso, Meyer, Christopher P., Berumen, Michael L., Bartholomew, Aaron, Yanagi, Kensuke, Rei

Journal:

Molecular Phylogenetics and Evolution

Year:

2019

Language:

english

File:

PDF, 7.37 MB

english, 2019

9

Morphological and ecological trait diversity reveal sensitivity of herbivorous fish assemblages to coral reef benthic conditions

Pombo-Ayora, LucÃa, Coker, Darren J., Carvalho, Susana, Short, George, Berumen, Michael L.

Journal:

Marine Environmental Research

Year:

2020

File:

PDF, 9.78 MB

2020

10

[IEEE OCEANS 2012 - YEOSU - Yeosu, Korea (South) (2012.05.21-2012.05.24)] 2012 Oceans - Yeosu - The integrated satellite-acoustic telemetry (iSAT) system for tracking marine megafauna

De La Torre, Pedro R., Salama, Khaled N., Berumen, Michael L., Smith, E. Lloyd

Year:

2012

Language:

english

File:

PDF, 960 KB

english, 2012

11

Molecular biodiversity of Red Sea demosponges

Erpenbeck, Dirk, Voigt, Oliver, Al-Aidaroos, Ali M., Berumen, Michael L., Büttner, Gabriele, Catania, Daniela, Guirguis, Adel Naguib, Paulay, Gustav, Schätzle, Simone, Wörheide, Gert

Journal:

Marine Pollution Bulletin

Year:

2016

Language:

english

File:

PDF, 1.78 MB

english, 2016

12

Coral mass spawning predicted by rapid seasonal rise in ocean temperature

Keith, Sally A., Maynard, Jeffrey A., Edwards, Alasdair J., Guest, James R., Bauman, Andrew G., van Hooidonk, Ruben, Heron, Scott F., Berumen, Michael L., Bouwmeester, Jessica, Piromvaragorn, Srisakul

Journal:

Proceedings Biological Sciences

Year:

2016

Language:

english

File:

PDF, 4.46 MB

english, 2016

13

Ongoing decline of shark populations in the Eastern Red Sea

Spaet, Julia L.Y., Nanninga, Gerrit B., Berumen, Michael L.

Journal:

Biological Conservation

Year:

2016

Language:

english

File:

PDF, 1.27 MB

english, 2016

14

Development and characterization of new polymorphic microsatellite markers in four sea anemones: Entacmaea quadricolor, Heteractis magnifica, Stichodactyla gigantea, and Stichodactyla mertensii

Gatins, Remy, Saenz-Agudelo, Pablo, Scott, Anna, Berumen, Michael L.

Journal:

Marine Biodiversity

Year:

2016

Language:

english

File:

PDF, 458 KB

english, 2016

15

New distribution records of the gall crab Opecarcinus cathyae van der Meij, 2014 (Decapoda: Brachyura: Cryptochiridae) from the Red Sea, Maldives and Japan

van der Meij, Sancia E. T., Benzoni, Francesca, Berumen, Michael L., Naruse, Tohru

Journal:

Marine Biodiversity

Year:

2016

Language:

english

File:

PDF, 2.42 MB

english, 2016

16

Erratum to: Genetic diversity of giant clams (Tridacna spp.) and their associated Symbiodinium in the central Red Sea

Pappas, Melissa K., He, Song, Hardenstine, Royale S., Kanee, Hana, Berumen, Michael L.

Journal:

Marine Biodiversity

Year:

2017

Language:

english

File:

PDF, 5.56 MB

english, 2017

17

Spatial patterns of cryptobenthic coral-reef fishes in the Red Sea

Coker, Darren J., DiBattista, Joseph D., Sinclair-Taylor, Tane H., Berumen, Michael L.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.85 MB

english, 2018

18

Using ezRAD to reconstruct the complete mitochondrial genome of Porites fontanesii (Cnidaria: Scleractinia)

Terraneo, Tullia I., Arrigoni, Roberto, Benzoni, Francesca, Forsman, Zac H., Berumen, Michael L.

Journal:

Mitochondrial DNA Part B

Year:

2018

Language:

english

File:

PDF, 652 KB

english, 2018

19

Acoustic backscatter at a Red Sea whale shark aggregation site

Hozumi, Aya, Kaartvedt, Stein, Røstad, Anders, Berumen, Michael L., Cochran, Jesse E.M., Jones, Burton H.

Journal:

Regional Studies in Marine Science

Year:

2018

Language:

english

File:

PDF, 12.85 MB

english, 2018

20

Astrocoryne cabela, gen. nov. et sp. nov. (Hydrozoa : Sphaerocorynidae), a new sponge-associated hydrozoan

Maggioni, Davide, Galli, Paolo, Berumen, Michael L., Arrigoni, Roberto, Seveso, Davide, Montano, Simone

Journal:

Invertebrate Systematics

Year:

2017

Language:

english

File:

PDF, 829 KB

english, 2017

21

Extensive use of mesopelagic waters by a Scalloped hammerhead shark (Sphyrna lewini) in the Red Sea

Spaet, Julia L. Y., Lam, Chi Hin, Braun, Camrin D., Berumen, Michael L.

Journal:

Animal Biotelemetry

Year:

2017

Language:

english

File:

PDF, 3.05 MB

english, 2017

22

Lack of host specificity of copepod crustaceans associated with mushroom corals in the Red Sea

Ivanenko, Viatcheslav N., Hoeksema, Bert W., Mudrova, Sofya V., Nikitin, Mikhail A., Martínez, Alejandro, Rimskaya-Korsakova, Nadezda N., Berumen, Michael L., Fontaneto, Diego

Journal:

Molecular Phylogenetics and Evolution

Year:

2018

Language:

english

File:

PDF, 1.44 MB

english, 2018

23

Movement Patterns of Juvenile Whale Sharks Tagged at an Aggregation Site in the Red Sea

Berumen, Michael L., Braun, Camrin D., Cochran, Jesse E. M., Skomal, Gregory B., Thorrold, Simon R., Sueur, Cédric

Journal:

Year:

2014

Language:

english

File:

PDF, 3.23 MB

english, 2014

24

Contrasting population genetic structure in three aggregating groupers (Percoidei: Epinephelidae) in the Indo-West Pacific: the importance of reproductive mode

Ma, Ka Yan, van Herwerden, Lynne, Newman, Stephen J., Berumen, Michael L., Choat, John Howard, Chu, Ka Hou, Sadovy de Mitcheson, Yvonne

Journal:

BMC Evolutionary Biology

Year:

2018

Language:

english

File:

PDF, 1.87 MB

english, 2018

25

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || Ecophysiology of Reef-Building Corals in the Red Sea

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 1.25 MB

english, 2019

26

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || The Entity-Process Framework for Integrated Agent-Based Modeling of Social-Ecological Systems

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 777 KB

english, 2019

27

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || Gain Scheduled PID Force Control of a Robotic Arm for Sewing Fabrics

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 2.75 MB

english, 2019

28

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || Extension of Matlab’s PDE Toolbox for Developing Bionic Structural Optimization Methods: Overlapping Region Concept

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 1.64 MB

english, 2019

29

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || Linear Motion Mechanisms for Fine Position Adjustment of Heavy Weight Platforms

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 1.54 MB

english, 2019

30

[Coral Reefs of the World] Coral Reefs of the Red Sea Volume 11 || A Two-Degree of Freedom Mobile Ankle Rehabilitation Unit (MARU) to Improve and Track Joint Mobility

Voolstra, Christian R., Berumen, Michael L.

Year:

2019

Language:

english

File:

PDF, 1.04 MB

english, 2019

31

Cryptic species and host specificity in the bryozoan-associated hydrozoan Zanclea divergens (Hydrozoa, Zancleidae)

Maggioni, Davide, Schiavo, Andrea, Ostrovsky, Andrew N., Seveso, Davide, Galli, Paolo, Arrigoni, Roberto, Berumen, Michael L., Benzoni, Francesca, Montano, Simone

Journal:

Molecular Phylogenetics and Evolution

Year:

2020

File:

PDF, 1.06 MB

2020

32

[IEEE 2020 IEEE Sensors Applications Symposium (SAS) - Kuala Lumpur, Malaysia (2020.3.9-2020.3.11)] 2020 IEEE Sensors Applications Symposium (SAS) - Cellular network Marine Sensor Buoy

Przybysz, Alexander, Duarte, Carlos M., Geraldi, Nathan R., Kosel, Jurgen, Berumen, Michael L.

Year:

2020

File:

PDF, 1.55 MB

2020

33

Polyphyly of the genus Zanclea and family Zancleidae (Hydrozoa, Capitata) revealed by the integrative analysis of two bryozoan-associated species

Maggioni, Davide, Arrigoni, Roberto, Galli, Paolo, Berumen, Michael L., Seveso, Davide, Montano, Simone, Hoeksema, B.W.

Journal:

Contributions to Zoology

Year:

2018

File:

PDF, 5.24 MB

2018

34

Trade-offs associated with dietary specialization in corallivorous butterflyfishes (Chaetodontidae:Chaetodon)

Michael L. Berumen, Morgan S. Pratchett

Journal:

Behavioral Ecology and Sociobiology

Year:

2008

Language:

english

File:

PDF, 155 KB

english, 2008

35

Recovery without resilience: persistent disturbance and long-term shifts in the structure of fish and coral communities at Tiahura Reef, Moorea

Michael L. Berumen, Morgan S. Pratchett

Journal:

Year:

2006

Language:

english

File:

PDF, 439 KB

english, 2006

36

The importance of juveniles in modelling growth: butterflyfish at Lizard Island

Michael L Berumen

Journal:

Environmental Biology of Fishes

Year:

2005

Language:

english

File:

PDF, 232 KB

english, 2005

37

External tagging does not affect the feeding behavior of a coral reef fish,Chaetodon vagabundus(Pisces: Chaetodontidae)

Michael L. Berumen, Glenn R. Almany

Journal:

Environmental Biology of Fishes

Year:

2009

Language:

english

File:

PDF, 102 KB

english, 2009

38

The use of specialisation indices to predict vulnerability of coral-feeding butterflyfishes to environmental change

Rebecca J. Lawton, Morgan S. Pratchett, Michael L. Berumen

Journal:

Year:

2012

Language:

english

File:

PDF, 379 KB

english, 2012

39

Persistence of self-recruitment and patterns of larval connectivity in a marine protected area network

Michael L. Berumen, Glenn R. Almany, Serge Planes, Geoffrey P. Jones, Pablo Saenz-Agudelo, Simon R. Thorrold

Journal:

Ecology and Evolution

Year:

2012

Language:

english

File:

PDF, 888 KB

english, 2012

40

Larval Export from Marine Reserves and the Recruitment Benefit for Fish and Fisheries

Hugo B. Harrison, David H. Williamson, Richard D. Evans, Glenn R. Almany, Simon R. Thorrold, Garry R. Russ, Kevin A. Feldheim, Lynne van Herwerden, Serge Planes, Maya Srinivasan, Michael L. Berumen, G

Journal:

Current Biology

Year:

2012

Language:

english

File:

PDF, 700 KB

english, 2012

41

Geographic variation in resource use by specialist versus generalist butterflyfishes

Rebecca J. Lawton, Andrew J. Cole, Michael L. Berumen, Morgan S. Pratchett

Journal:

Year:

2012

Language:

english

File:

PDF, 588 KB

english, 2012

42

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 May 2009–31 July 2009

Molecular Ecology Resources Primer Development Consortium, GLENN R. ALMANY, MAURÍCIO P. DE ARRUDA, WOLFGANG ARTHOFER, Z. K. ATALLAH, STEVEN R. BEISSINGER, MICHAEL L. BERUMEN, S. M. BOGDANOWICZ, S. D.

Journal:

Molecular Ecology Resources

Year:

2009

Language:

english

File:

PDF, 122 KB

english, 2009

43

Relative accuracy of three common methods of parentage analysis in natural populations

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., Berumen, Michael L.

Journal:

Molecular Ecology

Year:

2013

Language:

english

File:

PDF, 302 KB

english, 2013

44

Dispersal of Grouper Larvae Drives Local Resource Sharing in a Coral Reef Fishery

Almany, Glenn R., Hamilton, Richard J., Bode, Michael, Matawai, Manuai, Potuku, Tapas, Saenz-Agudelo, Pablo, Planes, Serge, Berumen, Michael L., Rhodes, Kevin L., Thorrold, Simon R., Russ, Garry R., J

Journal:

Current Biology

Year:

2013

Language:

english

File:

PDF, 378 KB

english, 2013

45

After continents divide: comparative phylogeography of reef fishes from the Red Sea and Indian Ocean

DiBattista, Joseph D., Berumen, Michael L., Gaither, Michelle R., Rocha, Luiz A., Eble, Jeff A., Choat, J. Howard, Craig, Matthew T., Skillings, Derek J., Bowen, Brian W., McClain, Craig

Journal:

Journal of Biogeography

Year:

2013

Language:

english

File:

PDF, 565 KB

english, 2013

46

Novel polymorphic microsatellite markers developed for a common reef sponge,Stylissa carteri

Emily C. Giles, Pablo Saenz-Agudelo, Michael L. Berumen…

Journal:

Marine Biodiversity

Year:

2013

Language:

english

File:

PDF, 208 KB

english, 2013

47

On minimizing assignment errors and the trade-off between false positives and negatives in parentage analysis

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., Berumen, Michael L.

Journal:

Molecular Ecology

Year:

2013

Language:

english

File:

PDF, 258 KB

english, 2013

48

Environmental gradients predict the genetic population structure of a coral reef fish in the Red Sea

Nanninga, Gerrit B., Saenz-Agudelo, Pablo, Manica, Andrea, Berumen, Michael L.

Journal:

Molecular Ecology

Year:

2014

Language:

english

File:

PDF, 492 KB

english, 2014

49

Validation of microsatellite multiplexes for parentage analysis and species discrimination in two hybridizing species of coral reef fish ( Plectropomus spp ., Serranidae)

Harrison, Hugo B., Feldheim, Kevin A., Jones, Geoffrey P., Ma, Kayan, Mansour, Hicham, Perumal, Sadhasivam, Williamson, David H., Berumen, Michael L.

Journal:

Ecology and Evolution

Year:

2014

Language:

english

File:

PDF, 194 KB

english, 2014

50

Genetic structure of populations of whale sharks among ocean basins and evidence for their historic rise and recent decline

Vignaud, Thomas M., Maynard, Jeffrey A., Leblois, Raphael, Meekan, Mark G., Vázquez-Juárez, Ricardo, Ramírez-Macías, Dení, Pierce, Simon J., Rowat, David, Berumen, Michael L., Beeravolu, Champak, Baks

Journal:

Molecular Ecology

Year:

2014

Language:

english

File:

PDF, 640 KB

english, 2014