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51

6126 POSTER Thymidylate Synthase as Biomarker in Rectal Cancer Patients After 5-FU-based Radiochemotherapy – Evaluation of the Prognostic Capacity in Pre-treatment Biopsies and Resected Adenocarcinoma

Conradi, L.C., Bleckmann, A., Sprenger, T., Schirmer, M., Homayounfar, K., Wolff, H.A., Becker, H., Ghadimi, B.M., Beissbarth, T., Liersch, T.

Journal:

European Journal of Cancer

Year:

2011

Language:

english

File:

PDF, 42 KB

english, 2011

52

Dynamics of mRNA and polysomal abundance in early 3T3-L1 adipogenesis

von der Heyde, Silvia, Fromm-Dornieden, Carolin, Salinas-Riester, Gabriela, Beissbarth, Tim, Baumgartner, Bernhard G

Journal:

Year:

2014

Language:

english

File:

PDF, 1.38 MB

english, 2014

53

Superior vena cava syndrome caused by a malignant tumor: a retrospective single-center analysis of 124 cases

Hohloch, Karin, Bertram, Nick, Trümper, Lorenz, Beissbarth, Tim, Griesinger, Frank

Journal:

Journal of Cancer Research and Clinical Oncology

Year:

2014

Language:

english

File:

PDF, 213 KB

english, 2014

54

Failure of Downregulation of Survivin Following Neoadjuvant Radiochemotherapy in Rectal Cancer Is Associated with Distant Metastases and Shortened Survival

Sprenger, T., Rodel, F., Beissbarth, T., Conradi, L.-C., Rothe, H., Homayounfar, K., Wolff, H. A., Ghadimi, B. M., Yildirim, M., Becker, H., Rodel, C., Liersch, T.

Journal:

Clinical Cancer Research

Year:

2011

Language:

english

File:

PDF, 548 KB

english, 2011

55

Adaption of the global test idea to proteomics data with missing values

Jung, K., Dihazi, H., Bibi, A., Dihazi, G. H., Beissbarth, T.

Journal:

Year:

2014

Language:

english

File:

PDF, 344 KB

english, 2014

56

Can mobile phone multimedia messages and text messages improve clinic attendance for Aboriginal children with chronic otitis media? A randomised controlled trial

Phillips, James H, Wigger, Christine, Beissbarth, Jemima, McCallum, Gabrielle B, Leach, Amanda, Morris, Peter S

Journal:

Journal of Paediatrics and Child Health

Year:

2014

Language:

english

File:

PDF, 198 KB

english, 2014

57

TNF-a stimulation enhances ROS-dependent cell migration via NF-?B activation in liver cells

Kastl, Lena, Sauer, Sven, Beissbarth, Tim, Becker, Michael, Krammer, Peter, Gülow, Karsten

Journal:

Free Radical Biology and Medicine

Year:

2014

Language:

english

File:

PDF, 61 KB

english, 2014

58

Strong EGFR signaling in cell line models of ERBB2-amplified breast cancer attenuates response towards ERBB2-targeting drugs

Henjes, F, Bender, C, von der Heyde, S, Braun, L, Mannsperger, H A, Schmidt, C, Wiemann, S, Hasmann, M, Aulmann, S, Beissbarth, T, Korf, U

Journal:

Year:

2012

Language:

english

File:

PDF, 674 KB

english, 2012

59

Primary bacteraemia is associated with a higher mortality risk compared with pulmonary and intra-abdominal infections in patients with sepsis: a prospective observational cohort study

Mansur, A., Klee, Y., Popov, A. F., Erlenwein, J., Ghadimi, M., Beissbarth, T., Bauer, M., Hinz, J.

Journal:

Year:

2015

Language:

english

File:

PDF, 823 KB

english, 2015

60

Nedd4-WW Domain-Binding Protein 5 (Ndfip1) Is Associated with Neuronal Survival after Acute Cortical Brain Injury

Sang, Q., Kim, M. H., Kumar, S., Bye, N., Morganti-Kossman, M. C., Gunnersen, J., Fuller, S., Howitt, J., Hyde, L., Beissbarth, T., Scott, H. S., Silke, J., Tan, S.-S.

Journal:

Journal of Neuroscience

Year:

2006

Language:

english

File:

PDF, 1.16 MB

english, 2006

61

Estrogen-Dependent Gene Transcription in Human Breast Cancer Cells Relies upon Proteasome-Dependent Monoubiquitination of Histone H2B

Prenzel, T., Begus-Nahrmann, Y., Kramer, F., Hennion, M., Hsu, C., Gorsler, T., Hintermair, C., Eick, D., Kremmer, E., Simons, M., Beissbarth, T., Johnsen, S. A.

Journal:

Cancer Research

Year:

2011

Language:

english

File:

PDF, 2.22 MB

english, 2011

62

Comparison of Nasal Swabs with Nose Blowing for Community-Based Pneumococcal Surveillance of Healthy Children

Leach, A. J., Stubbs, E., Hare, K., Beissbarth, J., Morris, P. S.

Journal:

Journal of Clinical Microbiology

Year:

2008

Language:

english

File:

PDF, 40 KB

english, 2008

63

Monitoring the Switch from Housekeeping to Pathogen Defense Metabolism in Arabidopsis thaliana Using cDNA Arrays

Scheideler, M., Schlaich, N. L., Fellenberg, K., Beissbarth, T., Hauser, N. C., Vingron, M., Slusarenko, A. J., Hoheisel, J. D.

Journal:

Journal of Biological Chemistry

Year:

2002

Language:

english

File:

PDF, 1.02 MB

english, 2002

64

A global microRNA screen identifies regulators of the ErbB receptor signaling network

Bischoff, Annabell, Bayerlová, Michaela, Strotbek, Michaela, Schmid, Simone, Beissbarth, Tim, Olayioye, Monilola A

Journal:

Cell Communication and Signaling

Year:

2015

Language:

english

File:

PDF, 2.42 MB

english, 2015

65

QuantProReloaded: quantitative analysis of microspot immunoassays

Jocker, A., Sonntag, J., Henjes, F., Gotschel, F., Tresch, A., Beissbarth, T., Wiemann, S., Korf, U.

Journal:

Year:

2010

Language:

english

File:

PDF, 146 KB

english, 2010

66

Estimating large-scale signaling networks through nested effect models with intervention effects from microarray data

Frohlich, H., Fellmann, M., Sultmann, H., Poustka, A., Beissbarth, T.

Journal:

Year:

2008

Language:

english

File:

PDF, 272 KB

english, 2008

67

Analyzing gene perturbation screens with nested effects models in R and bioconductor

Frohlich, H., Beissbarth, T., Tresch, A., Kostka, D., Jacob, J., Spang, R., Markowetz, F.

Journal:

Year:

2008

Language:

english

File:

PDF, 77 KB

english, 2008

68

Statistical modeling of sequencing errors in SAGE libraries

Beissbarth, T., Hyde, L., Smyth, G. K., Job, C., Boon, W.-M., Tan, S.-S., Scott, H. S., Speed, T. P.

Journal:

Year:

2004

Language:

english

File:

PDF, 238 KB

english, 2004

69

GOstat: find statistically overrepresented Gene Ontologies within a group of genes

Beissbarth, T., Speed, T. P.

Journal:

Year:

2004

Language:

english

File:

PDF, 97 KB

english, 2004

70

Predicting pathway membership via domain signatures

Frohlich, H., Fellmann, M., Sultmann, H., Poustka, A., Beissbarth, T.

Journal:

Year:

2008

Language:

english

File:

PDF, 155 KB

english, 2008

71

pathClass: an R-package for integration of pathway knowledge into support vector machines for biomarker discovery

Johannes, M., Frohlich, H., Sultmann, H., Beissbarth, T.

Journal:

Year:

2011

Language:

english

File:

PDF, 118 KB

english, 2011

72

pwOmics: an R package for pathway-based integration of time-series omics data using public database knowledge

Wachter, A., Beissbarth, T.

Journal:

Year:

2015

Language:

english

File:

PDF, 394 KB

english, 2015

73

-catenin-independent WNT signaling in basal-like breast cancer and brain metastasis

Klemm, F., Bleckmann, A., Siam, L., Chuang, H. N., Rietkotter, E., Behme, D., Schulz, M., Schaffrinski, M., Schindler, S., Trumper, L., Kramer, F., Beissbarth, T., Stadelmann, C., Binder, C., Pukrop,

Journal:

Year:

2011

Language:

english

File:

PDF, 1.40 MB

english, 2011

74

A PCR-High-Resolution Melt Assay for Rapid Differentiation of Nontypeable Haemophilus influenzae and Haemophilus haemolyticus

Pickering, J., Binks, M. J., Beissbarth, J., Hare, K. M., Kirkham, L.-A. S., Smith-Vaughan, H., Forbes, B. A.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 950 KB

english, 2014

75

Chronic kidney disease is associated with a higher 90-day mortality than other chronic medical conditions in patients with sepsis

Mansur, Ashham, Mulwande, Evelyn, Steinau, Maximilian, Bergmann, Ingo, Frederik Popov, Aron, Ghadimi, Michael, Beissbarth, Tim, Bauer, Martin, Hinz, José

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 327 KB

english, 2015

76

Lymph Node Metastases in Rectal Cancer After Preoperative Radiochemotherapy

Sprenger, Thilo, Rothe, Hilka, Becker, Heinz, Beissbarth, Tim, Homayounfar, Kia, Gauss, Korbinian, Kitz, Julia, Wolff, Hendrik, Scheel, Andreas H., Ghadimi, Michael, Rödel, Claus, Conradi, Lena-Christ

Journal:

American Journal of Surgical Pathology

Year:

2013

Language:

english

File:

PDF, 669 KB

english, 2013

77

Diversity of Nontypeable Haemophilus influenzae Strains Colonizing Australian Aboriginal and Non-Aboriginal Children

Pickering, J., Smith-Vaughan, H., Beissbarth, J., Bowman, J. M., Wiertsema, S., Riley, T. V., Leach, A. J., Richmond, P., Lehmann, D., Kirkham, L.- A.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 775 KB

english, 2014

78

Relapse-Free Survival in Breast Cancer Patients Is Associated with a Gene Expression Signature Characteristic for Inflammatory Breast Cancer

Van Laere, S., Beissbarth, T., Van der Auwera, I., Van den Eynden, G., Trinh, X. B., Elst, H., Van Hummelen, P., van Dam, P., Van Marck, E., Vermeulen, P., Dirix, L.

Journal:

Clinical Cancer Research

Year:

2008

Language:

english

File:

PDF, 418 KB

english, 2008

79

Dynamic deterministic effects propagation networks: learning signalling pathways from longitudinal protein array data

Bender, C., Henjes, F., Frohlich, H., Wiemann, S., Korf, U., Beissbarth, T.

Journal:

Year:

2010

Language:

english

File:

PDF, 620 KB

english, 2010

80

Cohesin is required for expression of the estrogen receptor-alpha (ESR1) gene

Prenzel, Tanja, Kramer, Frank, Bedi, Upasana, Nagarajan, Sankari, Beissbarth, Tim, Johnsen, Steven A

Journal:

Epigenetics & Chromatin

Year:

2012

Language:

english

File:

PDF, 1.95 MB

english, 2012

81

Integration of pathway knowledge into a reweighted recursive feature elimination approach for risk stratification of cancer patients

Johannes, M., Brase, J. C., Frohlich, H., Gade, S., Gehrmann, M., Falth, M., Sultmann, H., Beissbarth, T.

Journal:

Year:

2010

Language:

english

File:

PDF, 236 KB

english, 2010

82

rBiopaxParser--an R package to parse, modify and visualize BioPAX data

Kramer, F., Bayerlova, M., Klemm, F., Bleckmann, A., Beissbarth, T.

Journal:

Year:

2013

Language:

english

File:

PDF, 179 KB

english, 2013

83

Spatiotemporal Regulation of Multiple Overlapping Sense and Novel Natural Antisense Transcripts at the Nrgn and Camk2n1 Gene Loci during Mouse Cerebral Corticogenesis

Ling, K.-H., Hewitt, C. A., Beissbarth, T., Hyde, L., Cheah, P.-S., Smyth, G. K., Tan, S.-S., Hahn, C. N., Thomas, T., Thomas, P. Q., Scott, H. S.

Journal:

Cerebral Cortex

Year:

2011

Language:

english

File:

PDF, 2.53 MB

english, 2011

84

Gender-Specific Acute Organ Toxicity during Intensified Preoperative Radiochemotherapy for Rectal Cancer

Wolff, H. A., Conradi, L.-C., Schirmer, M., Beissbarth, T., Sprenger, T., Rave-Frank, M., Hennies, S., Hess, C. F., Becker, H., Christiansen, H., Liersch, T.

Journal:

Year:

2011

Language:

english

File:

PDF, 584 KB

english, 2011

85

A systematic approach for comprehensive T-cell epitope discovery using peptide libraries

Beissbarth, T., Tye-Din, J. A., Smyth, G. K., Speed, T. P., Anderson, R. P.

Journal:

Year:

2005

Language:

english

File:

PDF, 268 KB

english, 2005

86

A comparative analysis of transcribed genes in the mouse hypothalamus and neocortex reveals chromosomal clustering

Boon, W.-M., Beissbarth, T., Hyde, L., Smyth, G., Gunnersen, J., Denton, D. A., Scott, H., Tan, S.-S.

Journal:

Proceedings of the National Academy of Sciences

Year:

2004

Language:

english

File:

PDF, 504 KB

english, 2004

87

Comparison of global tests for functional gene sets in two-group designs and selection of potentially effect-causing genes

Jung, K., Becker, B., Brunner, E., Beissbarth, T.

Journal:

Year:

2011

Language:

english

File:

PDF, 267 KB

english, 2011

88

The putative oncogene CEP72 inhibits the mitotic function of BRCA1 and induces chromosomal instability

Lüddecke, S, Ertych, N, Stenzinger, A, Weichert, W, Beissbarth, T, Dyczkowski, J, Gaedcke, J, Valerius, O, Braus, G H, Kschischo, M, Bastians, H

Journal:

Year:

2015

Language:

english

File:

PDF, 1.07 MB

english, 2015

89

Impact of statin therapy on mortality in patients with sepsis-associated acute respiratory distress syndrome (ARDS) depends on ARDS severity: a prospective observational cohort study

Mansur, Ashham, Steinau, Maximilian, Popov, Aron Frederik, Ghadimi, Michael, Beissbarth, Tim, Bauer, Martin, Hinz, José

Journal:

Year:

2015

Language:

english

File:

PDF, 1.24 MB

english, 2015

90

Haemophilus influenzae: using comparative genomics to accurately identify a highly recombinogenic human pathogen

Price, Erin P., Sarovich, Derek S., Nosworthy, Elizabeth, Beissbarth, Jemima, Marsh, Robyn L., Pickering, Janessa, Kirkham, Lea-Ann S., Keil, Anthony D., Chang, Anne B., Smith-Vaughan, Heidi C.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.64 MB

english, 2015

91

Elucidation of B cell receptor signaling in Burkitt’s lymphoma reveals novel signaling nodes with potential therapeutic relevance

Oellerich, T., Corso, J., Beck, J., Doebele, C., Wachter, A., Lenz, C., Bohnenberger, H., Beissbarth, T., Gökbuget, N., Schütz, E., Serve, H., Urlaub, H.

Journal:

Clinical Lymphoma Myeloma and Leukemia

Year:

2015

Language:

english

File:

PDF, 79 KB

english, 2015

92

Prognostic value of CXCL12 and CXCR4 in inoperable head and neck squamous cell carcinoma

Rave-Fränk, Margret, Tehrany, Narges, Kitz, Julia, Leu, Martin, Weber, Hanne Elisabeth, Burfeind, Peter, Schliephake, Henning, Canis, Martin, Beissbarth, Tim, Reichardt, Holger Michael, Wolff, Hendrik

Journal:

Strahlentherapie und Onkologie

Year:

2016

File:

PDF, 471 KB

2016

93

Haemophilus influenzae isolates survive for up to 20years at −70°C in skim milk tryptone glucose glycerol broth (STGGB) if thawing is avoided during re-culture

Hare, K.M., Smith-Vaughan, H.C., Beissbarth, J., Leach, A.J.

Journal:

Journal of Microbiological Methods

Year:

2015

Language:

english

File:

PDF, 180 KB

english, 2015

94

Serum peptide reactivities may distinguish neuromyelitis optica subgroups and multiple sclerosis

Metz, I., Beissbarth, T., Ellenberger, D., Pache, F., Stork, L., Ringelstein, M., Aktas, O., Jarius, S., Wildemann, B., Dihazi, H., Friede, T., Bruck, W., Ruprecht, K., Paul, F.

Journal:

Neurology: Neuroimmunology & Neuroinflammation

Year:

2016

Language:

english

File:

PDF, 741 KB

english, 2016

95

Perioperative Blood Glucose Levels

Mansur, Ashham, Popov, Aron Frederik, Hanna, Ameen Abu, Bergmann, Ingo, Brandes, Ivo Florian, Beissbarth, Tim, Bauer, Martin, Hinz, José

Journal:

Medicine (Medicine Publishing Company Ltd)

Year:

2015

Language:

english

File:

PDF, 207 KB

english, 2015

96

Carcinoma of the colon and rectum with deregulation of insulin-like growth factor 2 signaling: clinical and molecular implications

Belharazem, Djeda, Magdeburg, Julia, Berton, Ann-Kristin, Beissbarth, Li, Sauer, Christian, Sticht, Carsten, Marx, Alexander, Hofheinz, Ralf, Post, Stefan, Kienle, Peter, Ströbel, Philipp

Journal:

Journal of Gastroenterology

Year:

2016

Language:

english

File:

PDF, 2.27 MB

english, 2016

97

Lymphknotenmetastasen beim ypT1/2-Rektumkarzinom nach neoadjuvanter Radiochemotherapie; Lymph node metastases in ypT1/2 rectal cancer after neoadjuvant chemoradiotherapy;

Sprenger, T., Rothe, H., Beissbarth, T., Conradi, L.-C., Kauffels, A., Homayounfar, K., Behnes, C. L., Rödel, C., Liersch, T., Ghadimi, M.

Journal:

Year:

2016

Language:

german

File:

PDF, 948 KB

german, 2016

98

General health, otitis media, nasopharyngeal carriage and middle ear microbiology in Northern Territory Aboriginal children vaccinated during consecutive periods of 10-valent or 13-valent pneumococcal conjugate vaccines

Leach, Amanda J., Wigger, Christine, Beissbarth, Jemima, Woltring, Donna, Andrews, Ross, Chatfield, Mark D., Smith-Vaughan, Heidi, Morris, Peter S.

Journal:

International Journal of Pediatric Otorhinolaryngology

Year:

2016

Language:

english

File:

PDF, 1.14 MB

english, 2016

99

Reduced middle ear infection with non-typeableHaemophilus influenzae, but notStreptococcus pneumoniae, after transition to 10-valent pneumococcal non-typeableH. influenzaeprotein D conjugate vaccine

Leach, Amanda Jane, Wigger, Christine, Hare, Kim, Hampton, Vanya, Beissbarth, Jemima, Andrews, Ross, Chatfield, Mark, Smith-Vaughan, Heidi, Morris, Peter Stanley

Journal:

Year:

2015

Language:

english

File:

PDF, 648 KB

english, 2015

100

WNT5A: a motility-promoting factor in Hodgkin lymphoma

Linke, F, Zaunig, S, Nietert, M M, von Bonin, F, Lutz, S, Dullin, C, Janovská, P, Beissbarth, T, Alves, F, Klapper, W, Bryja, V, Pukrop, T, Trümper, L, Wilting, J, Kube, D

Journal:

Year:

2016

Language:

english

File:

PDF, 4.19 MB

english, 2016

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