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51

Auxin Action: Slogging out of the Swamp

Philip N Benfey

Journal:

Current Biology

Year:

2002

Language:

english

File:

PDF, 102 KB

english, 2002

52

Trait-to-Gene: A Computational Method for Predicting the Function of Uncharacterized Genes

Mitchell Levesque, Dennis Shasha, Wook Kim, Michael G. Surette, Philip N. Benfey

Journal:

Current Biology

Year:

2003

Language:

english

File:

PDF, 194 KB

english, 2003

53

Stem cells:: A tale of two kingdoms

Philip N Benfey

Journal:

Current Biology

Year:

1999

Language:

english

File:

PDF, 58 KB

english, 1999

54

Is the shoot a root with a view?

Philip N Benfey

Journal:

Current Opinion in Plant Biology

Year:

1999

Language:

english

File:

PDF, 86 KB

english, 1999

55

Signaling the tips: Regulation of stem cell function in plants

Tal Nawy, Philip N. Benfey

Journal:

Differentiation

Year:

2001

Language:

english

File:

PDF, 98 KB

english, 2001

56

Detecting separate time scales in genetic expression data

David A Orlando, Siobhan M Brady, Thomas MA Fink, Philip N Benfey, Sebastian E Ahnert

Journal:

Year:

2010

Language:

english

File:

PDF, 1.51 MB

english, 2010

57

Cell type-specific transcriptional profiling: implications for metabolite profiling

Eric D. Rogers, Terry Jackson, Arieh Moussaieff, Asaph Aharoni, Philip N. Benfey

Journal:

The Plant Journal

Year:

2012

Language:

english

File:

PDF, 577 KB

english, 2012

58

Systems Approaches to Identifying Gene Regulatory Networks in Plants

Long, Terri A., Brady, Siobhan M., Benfey, Philip N.

Journal:

Annual Review of Cell and Developmental Biology

Year:

2008

Language:

english

File:

PDF, 645 KB

english, 2008

59

Transcriptional networks in root cell fate specification

Anjali S. Iyer-Pascuzzi, Philip N. Benfey

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Year:

2009

Language:

english

File:

PDF, 823 KB

english, 2009

60

Stem Cell Research Goes Underground: The RETINOBLASTOMA-RELATED Gene in Root Development

José R. Dinneny, Philip N. Benfey

Journal:

Year:

2005

Language:

english

File:

PDF, 346 KB

english, 2005

61

Plant Stem Cell Niches: Standing the Test of Time

José R. Dinneny, Philip N. Benfey

Journal:

Year:

2008

Language:

english

File:

PDF, 699 KB

english, 2008

62

Transcriptional Regulation of ROS Controls Transition from Proliferation to Differentiation in the Root

Hironaka Tsukagoshi, Wolfgang Busch, Philip N. Benfey

Journal:

Year:

2010

Language:

english

File:

PDF, 1.55 MB

english, 2010

63

Development and Ecology in the Time of Systems Biology

Philip N. Benfey

Journal:

Developmental Cell

Year:

2004

Language:

english

File:

PDF, 31 KB

english, 2004

64

Taking a Developmental Perspective on Systems Biology

Philip N. Benfey

Journal:

Developmental Cell

Year:

2011

Language:

english

File:

PDF, 56 KB

english, 2011

65

Cell Identity Regulators Link Development and Stress Responses in the Arabidopsis Root

Anjali S. Iyer-Pascuzzi, Terry Jackson, Hongchang Cui, Jalean J. Petricka, Wolfgang Busch, Hironaka Tsukagoshi, Philip N. Benfey

Journal:

Developmental Cell

Year:

2011

Language:

english

File:

PDF, 1.35 MB

english, 2011

66

Root layers: complex regulation of developmental patterning

Jalean J Petricka, Philip N Benfey

Journal:

Current Opinion in Genetics & Development

Year:

2008

Language:

english

File:

PDF, 730 KB

english, 2008

67

Apical–basal polarity: why plant cells don't standon their heads

Jiří Friml, Philip Benfey, Eva Benková, Malcolm Bennett, Thomas Berleth, Niko Geldner, Markus Grebe, Marcus Heisler, Jan Hejátko, Gerd Jürgens, Thomas Laux, Keith Lindsey, Wolfgang Lukowitz, Christian

Journal:

Trends in Plant Science

Year:

2006

Language:

english

File:

PDF, 67 KB

english, 2006

68

Shootward and rootward: peak terminology for plant polarity

Tobias I. Baskin, Benjamin Peret, Frantisek Baluška, Philip N. Benfey, Malcolm Bennett, Brian G. Forde, Simon Gilroy, Ykä Helariutta, Peter K. Hepler, Ottoline Leyser, Patrick H. Masson, Gloria K. Mud

Journal:

Trends in Plant Science

Year:

2010

Language:

english

File:

PDF, 308 KB

english, 2010

69

A systems biology approach to root development

Philip N. Benfey, Ji-Young Lee, Juliette Colinas, Hongchang Cui, Richard Twigg, Terri Long, I. Dinneny

Journal:

Developmental Biology

Year:

2006

Language:

english

File:

PDF, 63 KB

english, 2006

70

Development rooted in interwoven networks

Philip N. Benfey, Hongchang Cui, Richard Twigg, Terri Long, Anjali Iyer-Pascuzzi, Hironaka Tsukagoshi, Rosangela Sozzani, Terry Jackson, Jaimie Van Norman, Miguel Moreno-Risueno

Journal:

Developmental Biology

Year:

2009

Language:

english

File:

PDF, 53 KB

english, 2009

71

The SHORT-ROOT Gene Controls Radial Patterning of the Arabidopsis Root through Radial Signaling

Yrjo Helariutta, Hidehiro Fukaki, Joanna Wysocka-Diller, Keiji Nakajima, Jee Jung, Giovanni Sena, Marie-Theres Hauser, Philip N Benfey

Journal:

Year:

2000

Language:

english

File:

PDF, 754 KB

english, 2000

72

An Auxin-Dependent Distal Organizer of Pattern and Polarity in the Arabidopsis Root

Sabrina Sabatini, Dimitris Beis, Harald Wolkenfelt, Jane Murfett, Tom Guilfoyle, Jocelyn Malamy, Philip Benfey, Ottoline Leyser, Nicole Bechtold, Peter Weisbeek, Ben Scheres

Journal:

Year:

1999

Language:

english

File:

PDF, 449 KB

english, 1999

73

A Common Switch used by Plants and Animals

Philip N Benfey

Journal:

Year:

2004

Language:

english

File:

PDF, 38 KB

english, 2004

74

Axis formation and polarity in plants

Alice J Paquette, Philip N Benfey

Journal:

Current Opinion in Genetics & Development

Year:

2001

Language:

english

File:

PDF, 203 KB

english, 2001

75

Down and out in Arabidopsis: the formation of lateral roots

Jocelyn E. Malamy, Philip N. Benfey

Journal:

Trends in Plant Science

Year:

1997

Language:

english

File:

PDF, 2.91 MB

english, 1997

76

Genes that regulate plant development

Roger A. Aeschbacher, Philip N. Benfey

Journal:

Year:

1992

Language:

english

File:

PDF, 1022 KB

english, 1992

77

Handbook of Systems Biology || Arabidopsis as a Model for Systems Biology

Benfey, Philip N.

Year:

2013

Language:

english

File:

PDF, 1.48 MB

english, 2013

78

ASYMMETRIC CELL DIVISION IN PLANTS

Scheres, Ben, Benfey, Philip N.

Journal:

Annual Review of Plant Biology

Year:

1999

Language:

english

File:

PDF, 399 KB

english, 1999

79

Advanced imaging techniques for the study of plant growth and development

Sozzani, Rosangela, Busch, Wolfgang, Spalding, Edgar P., Benfey, Philip N.

Journal:

Trends in Plant Science

Year:

2014

Language:

english

File:

PDF, 1.23 MB

english, 2014

80

HEC of a Job Regulating Stem Cells

Sparks, Erin E., Benfey, Philip N.

Journal:

Developmental Cell

Year:

2014

Language:

english

File:

PDF, 238 KB

english, 2014

81

Philip Benfey

Journal:

Current Biology

Year:

2013

Language:

english

File:

PDF, 179 KB

english, 2013

82

Human and Rat Mast Cell High-Affinity Immunoglobulin E Receptors: Characterization of Putative α -Chain Gene Products

Akira Shimizu, Isidore Tepler, Philip N. Benfey, Elsa H. Berenstein, Reuben P. Siraganjan and Philip Leder

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 1.35 MB

english, 1988

83

Site-Specific Mutations Alter in vitro Factor Binding and Change Promoter Expression Pattern in Transgenic Plants

Eric Lam, Philip N. Benfey, Philip M. Gilmartin, Rong-Xiang Fang and Nam-Hai Chua

Journal:

Proceedings of the National Academy of Sciences

Year:

1989

Language:

english

File:

PDF, 1.33 MB

english, 1989

84

Regulation of Plant Stem Cell Quiescence by a Brassinosteroid Signaling Module

Vilarrasa-Blasi, Josep, González-García, Mary-Paz, Frigola, David, Fàbregas, Norma, Alexiou, Konstantinos G., López-Bigas, Nuria, Rivas, Susana, Jauneau, Alain, Lohmann, Jan U., Benfey, Philip N., Iba

Journal:

Developmental Cell

Year:

2014

Language:

english

File:

PDF, 4.00 MB

english, 2014

85

Paired-End Analysis of Transcription Start Sites in Arabidopsis Reveals Plant-Specific Promoter Signatures

Morton, Taj, Petricka, Jalean, Corcoran, David L., Li, Song, Winter, Cara M., Carda, Alexa, Benfey, Philip N., Ohler, Uwe, Megraw, Molly

Journal:

Year:

2014

Language:

english

File:

PDF, 1.58 MB

english, 2014

86

Promoting Collaborative Interdisciplinary Research at the Duke Center for Systems Biology

Stone, Jana E., Benfey, Philip N., You, Lingchong

Journal:

ACS Synthetic Biology

Year:

2012

Language:

english

File:

PDF, 535 KB

english, 2012

87

Additions and corrections: A systems approach to understanding root development

Brady, Siobhan M., Benfey, Philip N.

Journal:

Canadian Journal of Botany

Year:

2006

File:

PDF, 25 KB

2006

88

A systems approach to understanding root development

Brady, Siobhan M., Benfey, Philip N.

Journal:

Canadian Journal of Botany

Year:

2006

Language:

english

File:

PDF, 112 KB

english, 2006

89

High-throughput phenotyping of multicellular organisms: finding the link between genotype and phenotype

Rosangela Sozzani,Philip N Benfey

Journal:

Year:

2011

Language:

english

File:

PDF, 838 KB

english, 2011

90

[IEEE 2011 IEEE International Conference on Computer Vision (ICCV) - Barcelona, Spain (2011.11.6-2011.11.13)] 2011 International Conference on Computer Vision - Detailed reconstruction of 3D plant root shape

Ying Zheng,, Gu, Steve, Edelsbrunner, Herbert, Tomasi, Carlo, Benfey, Philip

Year:

2011

Language:

english

File:

PDF, 5.41 MB

english, 2011

91

Distinct sensitivities to phosphate deprivation suggest that RGF peptides play disparate roles in Arabidopsis thaliana root development

Cederholm, Heidi M., Benfey, Philip N.

Journal:

New Phytologist

Year:

2015

Language:

english

File:

PDF, 319 KB

english, 2015

92

Evolution, Interactions, and Biological Networks

Weitz, Joshua S., Benfey, Philip N., Wingreen, Ned S.

Journal:

Year:

2007

Language:

english

File:

PDF, 141 KB

english, 2007

93

Integrated functional networks of process, tissue, and developmental stage specific interactions inArabidopsis thaliana

Pop, Ana, Huttenhower, Curtis, Iyer-Pascuzzi, Anjali, Benfey, Philip N, Troyanskaya, Olga G

Journal:

BMC Systems Biology

Year:

2010

Language:

english

File:

PDF, 826 KB

english, 2010

94

A Gene Regulatory Network for Root Epidermis Cell Differentiation in Arabidopsis

Bruex, Angela, Kainkaryam, Raghunandan M., Wieckowski, Yana, Kang, Yeon Hee, Bernhardt, Christine, Xia, Yang, Zheng, Xiaohua, Wang, Jean Y., Lee, Myeong Min, Benfey, Philip, Woolf, Peter J., Schiefelb

Journal:

Year:

2012

Language:

english

File:

PDF, 12.63 MB

english, 2012

95

Regulation of Plant Stem Cell Quiescence by a Brassinosteroid Signaling Module

Vilarrasa-Blasi, Josep, González-García, Mary-Paz, Frigola, David, Fàbregas-Vallvé, Norma, Alexiou, Konstantinos G., López-Bigas, Nuria, Rivas, Susana, Jauneau, Alain, Lohmann, Jan U., Benfey, Philip

Journal:

Developmental Cell

Year:

2015

Language:

english

File:

PDF, 99 KB

english, 2015

96

Spatio-temporal sequence of cross-regulatory events in root meristem growth

Emanuele Scacchi, Paula Salinas, Bojan Gujas, Luca Santuari, Naden Krogan, Laura Ragni, Thomas Berleth, Christian S. Hardtke and Philip Benfey

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.59 MB

english, 2010

97

Root Development

Scheres, Ben, Benfey, Philip, Dolan, Liam

Journal:

The Arabidopsis Book

Year:

2002

Language:

english

File:

PDF, 845 KB

english, 2002

98

Time-based patterning in development

Moreno-Risueno, Miguel A., Benfey, Philip N.

Journal:

Year:

2011

Language:

english

File:

PDF, 2.59 MB

english, 2011

99

Combining Expression and Comparative Evolutionary Analysis. The COBRA Gene Family

Siobhan M. Brady, Shuang Song, Kanwarpal S. Dhugga, J. Antoni Rafalski and Philip N. Benfey

Journal:

PLANT PHYSIOLOGY

Year:

2007

Language:

english

File:

PDF, 4.65 MB

english, 2007

100

Arabidopsis Special Issue || Developmental Networks

Philip N. Benfey

Journal:

PLANT PHYSIOLOGY

Year:

2005

Language:

english

File:

PDF, 373 KB

english, 2005

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