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51

ERG rearrangement is specific to prostate cancer and does not occur in any other common tumor

Scheble, Veit J, Braun, Martin, Beroukhim, Rameen, Mermel, Craig H, Ruiz, Christian, Wilbertz, Theresia, Stiedl, Ann-Cathrin, Petersen, Karen, Reischl, Markus, Kuefer, Rainer, Schilling, David, Fend,

Journal:

Modern Pathology

Year:

2010

Language:

english

File:

PDF, 212 KB

english, 2010

52

Allele-Specific Amplification in Cancer Revealed by SNP Array Analysis

LaFramboise, Thomas, Weir, Barbara A., Zhao, Xiaojun, Beroukhim, Rameen, Li, Cheng, Harrington, David, Sellers, William R., Meyerson, Matthew

Journal:

PLoS Computational Biology

Year:

2005

Language:

english

File:

PDF, 478 KB

english, 2005

53

Update on bevacizumab and other angiogenesis inhibitors for brain cancer

Rinne, Mikael L, Lee, Eudocia Q, Nayak, Lakshmi, Norden, Andrew D, Beroukhim, Rameen, Wen, Patrick Y, Reardon, David A

Journal:

Expert Opinion on Emerging Drugs

Year:

2013

Language:

english

File:

PDF, 410 KB

english, 2013

54

The RasGAP Gene, RASAL2, Is a Tumor and Metastasis Suppressor

McLaughlin, Sara Koenig, Olsen, Sarah Naomi, Dake, Benjamin, De Raedt, Thomas, Lim, Elgene, Bronson, Roderick Terry, Beroukhim, Rameen, Polyak, Kornelia, Brown, Myles, Kuperwasser, Charlotte, Cichowsk

Journal:

Year:

2013

Language:

english

File:

PDF, 3.96 MB

english, 2013

55

TRAF2 is an NF-κB-activating oncogene in epithelial cancers

Shen, R R, Zhou, A Y, Kim, E, O'Connell, J T, Hagerstrand, D, Beroukhim, R, Hahn, W C

Journal:

Year:

2015

Language:

english

File:

PDF, 851 KB

english, 2015

56

Pediatric low-grade gliomas: How modern biology reshapes the clinical field

Bergthold, Guillaume, Bandopadhayay, Pratiti, Bi, Wenya Linda, Ramkissoon, Lori, Stiles, Charles, Segal, Rosalind A., Beroukhim, Rameen, Ligon, Keith L., Grill, Jacques, Kieran, Mark W.

Journal:

Biochimica et Biophysica Acta (BBA) - Reviews on Cancer

Year:

2014

Language:

english

File:

PDF, 891 KB

english, 2014

57

SQSTM1 Is a Pathogenic Target of 5q Copy Number Gains in Kidney Cancer

Li, Lianjie, Shen, Chuan, Nakamura, Eijiro, Ando, Kiyohiro, Signoretti, Sabina, Beroukhim, Rameen, Cowley, Glenn S., Lizotte, Patrick, Liberzon, Ella, Bair, Steven, Root, David E., Tamayo, Pablo, Tshe

Journal:

Year:

2013

Language:

english

File:

PDF, 3.57 MB

english, 2013

58

Irreversible electroporation (NanoKnife) in cancer treatment

Jourabchi, Natanel, Beroukhim, Kourosh, Tafti, Bashir A., Kee, Stephen T., Lee, Edward W.

Journal:

Gastrointestinal Intervention

Year:

2014

Language:

english

File:

PDF, 1.69 MB

english, 2014

59

Echocardiographic Features of Double-Outlet Right Atrium and Straddling Tricuspid Valve with Intact Ventricular Septum: A Rare Cardiac Anomaly Associated with Pulmonary Atresia and Single Coronary Artery Ostium

Beroukhim, Rebecca S., Geva, Tal

Journal:

Journal of the American Society of Echocardiography

Year:

2010

Language:

english

File:

PDF, 1.11 MB

english, 2010

60

Adjuvant radiation therapy, local recurrence, and the need for salvage therapy in atypical meningioma

Aizer, A. A., Arvold, N. D., Catalano, P., Claus, E. B., Golby, A. J., Johnson, M. D., Al-Mefty, O., Wen, P. Y., Reardon, D. A., Lee, E. Q., Nayak, L., Rinne, M. L., Beroukhim, R., Weiss, S. E., Ramki

Journal:

Year:

2014

Language:

english

File:

PDF, 212 KB

english, 2014

61

Toxicity, Hospitalization Burden, and Survival Among Glioblastoma Patients Receiving Chemoradiation

Rahman, R., Catalano, P.J., Norden, A.D., Wen, P.Y., Reardon, D.A., Lee, E.Q., Nayak, L., Beroukhim, R., Dunn, I.F., Golby, A.J., Johnson, M.D., Claus, E.B., Chiocca, E.A., Alexander, B.M., Arvold, N.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2014

Language:

english

File:

PDF, 60 KB

english, 2014

62

Microglia and their CX3CR1 signaling are involved in hippocampal- but not olfactory bulb-related memory and neurogenesis

Reshef, Ronen, Kreisel, Tirzah, Beroukhim Kay, Dorsa, Yirmiya, Raz

Journal:

Brain, Behavior, and Immunity

Year:

2014

Language:

english

File:

PDF, 3.64 MB

english, 2014

63

Comprehensive molecular characterization of clear cell renal cell carcinoma

Creighton, Chad J., Morgan, Margaret, Gunaratne, Preethi H., Wheeler, David A., Gibbs, Richard A., Gordon Robertson, A., Chu, Andy, Beroukhim, Rameen, Cibulskis, Kristian, Signoretti, Sabina, Vandin H

Journal:

Year:

2013

Language:

english

File:

PDF, 2.38 MB

english, 2013

64

A mathematical framework to determine the temporal sequence of somatic genetic events in cancer

Attolini, C. S.-O., Cheng, Y.-K., Beroukhim, R., Getz, G., Abdel-Wahab, O., Levine, R. L., Mellinghoff, I. K., Michor, F.

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 748 KB

english, 2010

65

SGK3 Mediates INPP4B-Dependent PI3K Signaling in Breast Cancer

Gasser, Jessica A., Inuzuka, Hiroyuki, Lau, Alan W., Wei, Wenyi, Beroukhim, Rameen, Toker, Alex

Journal:

Year:

2014

Language:

english

File:

PDF, 2.70 MB

english, 2014

66

Ebstein Anomaly: Assessment, Management, and Timing of Intervention

Puneeta Arya MBBS,Rebecca Beroukhim MD

Journal:

Current Treatment Options in Cardiovascular Medicine

Year:

2014

Language:

english

File:

PDF, 538 KB

english, 2014

67

Retrospective study of carmustine or lomustine with bevacizumab in recurrent glioblastoma patients who have failed prior bevacizumab

Rahman, R., Hempfling, K., Norden, A. D., Reardon, D. A., Nayak, L., Rinne, M. L., Beroukhim, R., Doherty, L., Ruland, S., Rai, A., Rifenburg, J., LaFrankie, D., Alexander, B. M., Huang, R. Y., Wen, P

Journal:

Year:

2014

Language:

english

File:

PDF, 132 KB

english, 2014

68

Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma

Beroukhim, R., Getz, G., Nghiemphu, L., Barretina, J., Hsueh, T., Linhart, D., Vivanco, I., Lee, J. C., Huang, J. H., Alexander, S., Du, J., Kau, T., Thomas, R. K., Shah, K., Soto, H., Perner, S., Pre

Journal:

Proceedings of the National Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 780 KB

english, 2007

69

Low BMI-1 expression is associated with an activated BMI-1-driven signature, vascular invasion, and hormone receptor loss in endometrial carcinoma

Engelsen, I B, Mannelqvist, M, Stefansson, I M, Carter, S L, Beroukhim, R, Øyan, A M, Otte, A P, Kalland, K H, Akslen, L A, Salvesen, H B

Journal:

British Journal of Cancer

Year:

2008

Language:

english

File:

PDF, 276 KB

english, 2008

70

PAK1 is a breast cancer oncogene that coordinately activates MAPK and MET signaling

Shrestha, Y, Schafer, E J, Boehm, J S, Thomas, S R, He, F, Du, J, Wang, S, Barretina, J, Weir, B A, Zhao, J J, Polyak, K, Golub, T R, Beroukhim, R, Hahn, W C

Journal:

Year:

2012

Language:

english

File:

PDF, 875 KB

english, 2012

71

Reply to Parsons: Many tumor types follow the monoclonal model of tumor initiation

Cheng, Yu-Kang, Beroukhim, Rameen, Levine, Ross L., Mellinghoff, Ingo K., Michor, Franziska

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 433 KB

english, 2011

72

Outcomes After Anatomic Repair for D-Transposition of the Great Arteries With Left Ventricular Outflow Tract Obstruction

Emani, S. M., Beroukhim, R., Zurakowski, D., Pigula, F. A., Mayer, J. E., del Nido, P. J., Geva, T., Bacha, E. A.

Journal:

Year:

2009

Language:

english

File:

PDF, 406 KB

english, 2009

73

Highly parallel identification of essential genes in cancer cells

Luo, B., Cheung, H. W., Subramanian, A., Sharifnia, T., Okamoto, M., Yang, X., Hinkle, G., Boehm, J. S., Beroukhim, R., Weir, B. A., Mermel, C., Barbie, D. A., Awad, T., Zhou, X., Nguyen, T., Piqani,

Journal:

Proceedings of the National Academy of Sciences

Year:

2008

Language:

english

File:

PDF, 5.37 MB

english, 2008

74

Oncosome Formation in Prostate Cancer: Association with a Region of Frequent Chromosomal Deletion in Metastatic Disease

Di Vizio, D., Kim, J., Hager, M. H., Morello, M., Yang, W., Lafargue, C. J., True, L. D., Rubin, M. A., Adam, R. M., Beroukhim, R., Demichelis, F., Freeman, M. R.

Journal:

Cancer Research

Year:

2009

Language:

english

File:

PDF, 497 KB

english, 2009

75

Prioritizing causal disease genes using unbiased genomic features

Deo, Rahul C, Musso, Gabriel, Tasan, Murat, Tang, Paul, Poon, Annie, Yuan, Christiana, Felix, Janine F, Vasan, Ramachandran S, Beroukhim, Rameen, De Marco, Teresa, Kwok, Pui-Yan, MacRae, Calum A, Roth

Journal:

Year:

2014

Language:

english

File:

PDF, 1.49 MB

english, 2014

76

Vandetanib plus sirolimus in adults with recurrent glioblastoma: results of a phase I and dose expansion cohort study

Chheda, Milan G., Wen, Patrick Y., Hochberg, Fred H., Chi, Andrew S., Drappatz, Jan, Eichler, April F., Yang, Daniel, Beroukhim, Rameen, Norden, Andrew D., Gerstner, Elizabeth R., Betensky, Rebecca A.

Journal:

Journal of Neuro-Oncology

Year:

2015

Language:

english

File:

PDF, 353 KB

english, 2015

77

Beating the odds: extreme long-term survival with glioblastoma

Bi, W. L., Beroukhim, R.

Journal:

Year:

2014

Language:

english

File:

PDF, 51 KB

english, 2014

78

ATARiS: Computational quantification of gene suppression phenotypes from multisample RNAi screens

Shao, D. D., Tsherniak, A., Gopal, S., Weir, B. A., Tamayo, P., Stransky, N., Schumacher, S. E., Zack, T. I., Beroukhim, R., Garraway, L. A., Margolin, A. A., Root, D. E., Hahn, W. C., Mesirov, J. P.

Journal:

Genome Research

Year:

2013

Language:

english

File:

PDF, 1.68 MB

english, 2013

79

ARID1A and TERT promoter mutations in dedifferentiated meningioma

Abedalthagafi, Malak S., Bi, Wenya Linda, Merrill, Parker H., Gibson, William J., Rose, Matthew F., Du, Ziming, Francis, Joshua M., Du, Rose, Dunn, Ian F., Ligon, Azra H., Beroukhim, Rameen, Santagata

Journal:

Cancer Genetics

Year:

2015

Language:

english

File:

PDF, 1.03 MB

english, 2015

80

Modeling Genomic Diversity and Tumor Dependency in Malignant Melanoma

Lin, W. M., Baker, A. C., Beroukhim, R., Winckler, W., Feng, W., Marmion, J. M., Laine, E., Greulich, H., Tseng, H., Gates, C., Hodi, F. S., Dranoff, G., Sellers, W. R., Thomas, R. K., Meyerson, M., G

Journal:

Cancer Research

Year:

2008

Language:

english

File:

PDF, 1.61 MB

english, 2008

81

Importance of the Clinical Recognition of Loeys-Dietz Syndrome in the Neonatal Period

Yetman, A. T., Beroukhim, R. S., Ivy, D. D., Manchester, D.

Journal:

Year:

2007

Language:

english

File:

PDF, 251 KB

english, 2007

82

Integrated Genome-Wide DNA Copy Number and Expression Analysis Identifies Distinct Mechanisms of Primary Chemoresistance in Ovarian Carcinomas

Etemadmoghadam, D., deFazio, A., Beroukhim, R., Mermel, C., George, J., Getz, G., Tothill, R., Okamoto, A., Raeder, M. B., Harnett, P., Lade, S., Akslen, L. A., Tinker, A. V., Locandro, B., Alsop, K.,

Journal:

Clinical Cancer Research

Year:

2009

Language:

english

File:

PDF, 581 KB

english, 2009

83

An Echocardiographic Model Predicting Severity of Aortic Regurgitation in Congenital Heart Disease

Beroukhim, R. S., Graham, D. A., Margossian, R., Brown, D. W., Geva, T., Colan, S. D.

Journal:

Circulation Cardiovascular Imaging

Year:

2010

Language:

english

File:

PDF, 704 KB

english, 2010

84

Subgroup-specific structural variation across 1,000 medulloblastoma genomes

Northcott, Paul A., Shih, David J. H., Peacock, John, Garzia, Livia, Sorana Morrissy, A., Zichner, Thomas, Stütz, Adrian M., Korshunov, Andrey, Reimand, Jüri, Schumacher, Steven E., Beroukhim, Rameen,

Journal:

Year:

2012

Language:

english

File:

PDF, 924 KB

english, 2012

85

Epidermal Growth Factor Receptor Activation in Glioblastoma through Novel Missense Mutations in the Extracellular Domain

Lee, Jeffrey C., Vivanco, Igor, Beroukhim, Rameen, Huang, Julie H. Y., Feng, Whei L., DeBiasi, Ralph M., Yoshimoto, Koji, King, Jennifer C., Nghiemphu, Phioanh, Yuza, Yuki, Xu, Qing, Greulich, Heidi,

Journal:

Year:

2006

Language:

english

File:

PDF, 560 KB

english, 2006

86

Inferring Loss-of-Heterozygosity from Unpaired Tumors Using High-Density Oligonucleotide SNP Arrays

Beroukhim, Rameen, Lin, Ming, Park, Yuhyun, Hao, Ke, Zhao, Xiaojun, Garraway, Levi A., Fox, Edward A., Hochberg, Ephraim P., Mellinghoff, Ingo K., Hofer, Matthias D., Descazeaud, Aurelien, Rubin, Mark

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 29 KB

english, 2006

87

Phase 2 study of dose-intense temozolomide in recurrent glioblastoma

Norden, A. D., Lesser, G. J., Drappatz, J., Ligon, K. L., Hammond, S. N., Lee, E. Q., Reardon, D. R., Fadul, C. E., Plotkin, S. R., Batchelor, T. T., Zhu, J.-J., Beroukhim, R., Muzikansky, A., Doherty

Journal:

Year:

2013

Language:

english

File:

PDF, 126 KB

english, 2013

88

Cardiac Paraganglioma in an Adolescent

Beroukhim, R. S., del Nido, P., Teot, L. A., Janeway, K., Geva, T.

Journal:

Year:

2012

Language:

english

File:

PDF, 2.08 MB

english, 2012

89

A case report of heart failure after therapy with ustekinumab

Beroukhim, Kourosh, Danesh, Melissa, Nguyen, Catherine, Koo, John, Leon, Argentina

Journal:

Journal of Dermatology & Dermatologic Surgery

Year:

2015

Language:

english

File:

PDF, 223 KB

english, 2015

90

Incidence, risk factors, and reasons for hospitalization among glioblastoma patients receiving chemoradiation

Rahman, Rifaquat, Catalano, Paul J., Reardon, David A., Norden, Andrew D., Wen, Patrick Y., Lee, Eudocia Q., Nayak, Lakshmi, Beroukhim, Rameen, Dunn, Ian F., Golby, Alexandra J., Johnson, Mark D., Chi

Journal:

Journal of Neuro-Oncology

Year:

2015

Language:

english

File:

PDF, 543 KB

english, 2015

91

Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

Drier, Y., Lawrence, M. S., Carter, S. L., Stewart, C., Gabriel, S. B., Lander, E. S., Meyerson, M., Beroukhim, R., Getz, G.

Journal:

Genome Research

Year:

2013

Language:

english

File:

PDF, 776 KB

english, 2013

92

Structure and mechanism of activity-based inhibition of the EGF receptor by Mig6

Park, Eunyoung, Kim, Nayoung, Ficarro, Scott B, Zhang, Yi, Lee, Byung Il, Cho, Ahye, Kim, Kihong, Park, Angela K J, Park, Woong-Yang, Murray, Bradley, Meyerson, Matthew, Beroukhim, Rameen, Marto, Jarr

Journal:

Nature Structural and Molecular Biology

Year:

2015

Language:

english

File:

PDF, 2.33 MB

english, 2015

93

Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background

Elvers, Ingegerd, Turner-Maier, Jason, Swofford, Ross, Koltookian, Michele, Johnson, Jeremy, Stewart, Chip, Zhang, Cheng-Zhong, Schumacher, Steven E., Beroukhim, Rameen, Rosenberg, Mara, Thomas, Racha

Journal:

Genome Research

Year:

2015

Language:

english

File:

PDF, 1.50 MB

english, 2015

94

A mathematical framework to determine the temporal sequence of somatic genetic events in cancer

Camille Stephan-Otto Attolini, Yu-Kang Cheng, Rameen Beroukhim, Gad Getz, Omar Abdel-Wahab, Ross L. Levine, Ingo K. Mellinghoff and Franziska Michor

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.87 MB

english, 2010

95

Neonatal thyrotoxicosis and conjugated hyperbilirubinemia

Beroukhim, R. S., Moon, T. D., Felner, E. I.

Journal:

Journal of Maternal-Fetal and Neonatal Medicine

Year:

2003

Language:

english

File:

PDF, 327 KB

english, 2003

96

MECP2 Is a Frequently Amplified Oncogene with a Novel Epigenetic Mechanism that Mimics the Role of Activated RAS in Malignancy

Neupane, M., Clark, A. P., Landini, S., Birkbak, N. J., Eklund, A. C., Lim, E., Culhane, A. C., Barry, W. T., Schumacher, S. E., Beroukhim, R., Szallasi, Z., Vidal, M., Hill, D. E., Silver, D. P.

Journal:

Cancer Discovery

Year:

2015

Language:

english

File:

PDF, 1.02 MB

english, 2015

97

Phase II study of panobinostat in combination with bevacizumab for recurrent glioblastoma and anaplastic glioma

Lee, E. Q., Reardon, D. A., Schiff, D., Drappatz, J., Muzikansky, A., Grimm, S. A., Norden, A. D., Nayak, L., Beroukhim, R., Rinne, M. L., Chi, A. S., Batchelor, T. T., Hempfling, K., McCluskey, C., S

Journal:

Year:

2015

Language:

english

File:

PDF, 158 KB

english, 2015

98

Patterns of Gene Expression and Copy-Number Alterations in von-Hippel Lindau Disease-Associated and Sporadic Clear Cell Carcinoma of the Kidney

Beroukhim, R., Brunet, J.-P., Di Napoli, A., Mertz, K. D., Seeley, A., Pires, M. M., Linhart, D., Worrell, R. A., Moch, H., Rubin, M. A., Sellers, W. R., Meyerson, M., Linehan, W. M., Kaelin, W. G., S

Journal:

Cancer Research

Year:

2009

Language:

english

File:

PDF, 611 KB

english, 2009

99

VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules

Wala, Jeremiah, Zhang, Cheng-Zhong, Meyerson, Matthew, Beroukhim, Rameen

Journal:

Year:

2016

Language:

english

File:

PDF, 168 KB

english, 2016

100

Considerations on biologic agents in psoriasis with the new pregnancy lactation labeling rule

Abrouk, Michael, Beroukhim, Keroush, Nakamura, Mio, Zhu, Tian Hao, Farahnik, Benjamin, Singh, Rasnik, Brodsky, Merrick, Lee, Kristina, Koo, John, Bhutani, Tina

Journal:

International Journal of Women s Dermatology

Year:

2016

Language:

english

File:

PDF, 175 KB

english, 2016

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