Brooks III, Charles L.: search on Z-Library

The world's largest scientific articles store. 70,000,000+ articles for free.

Don't use scam websites

51

λ-Dynamics free energy simulation methods

Jennifer L. Knight, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2009

Language:

english

File:

PDF, 134 KB

english, 2009

52

Thermodynamics of protein folding: A statistical mechanical study of a small all-β protein

Zhuyan Guo, Charles L. Brooks III

Journal:

Year:

1997

Language:

english

File:

PDF, 160 KB

english, 1997

53

Electrostatic properties of cowpea chlorotic mottle virus and cucumber mosaic virus capsids

Robert Konecny, Joanna Trylska, Florence Tama, Deqiang Zhang, Nathan A. Baker, Charles L. Brooks III, J. A. McCammon

Journal:

Year:

2006

Language:

english

File:

PDF, 695 KB

english, 2006

54

Prediction of the Folding Pathways and Structure of the GCN4 Leucine Zipper

Michal Vieth, Andrzej Kolinski, Charles L. Brooks III, Jeffrey Skolnick

Journal:

Journal of Molecular Biology

Year:

1994

File:

PDF, 515 KB

1994

55

Simulations of protein folding and unfolding

Charles L Brooks III

Journal:

Current Opinion in Structural Biology

Year:

1998

Language:

english

File:

PDF, 520 KB

english, 1998

56

Deprotonation by Dehydration: The Origin of Ammonium Sensing in the AmtB Channel

Bostick, David L., III, Charles L. Brooks

Journal:

PLoS Computational Biology

Year:

2007

Language:

english

File:

PDF, 1.51 MB

english, 2007

57

Methodology for protein–ligand binding studies: Application to a model for drug resistance, the HIV/FIV protease system

Brian N. Dominy, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1999

Language:

english

File:

PDF, 155 KB

english, 1999

58

The coupling of structural fluctuations to hydride transfer in dihydrofolate reductase

Ian F. Thorpe, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 1.04 MB

english, 2004

59

Topological constraints: using RNA secondary structure to model 3D conformation, folding pathways, and dynamic adaptation

Maximillian H Bailor, Anthony M Mustoe, Charles L Brooks III, Hashim M Al-Hashimi

Journal:

Current Opinion in Structural Biology

Year:

2011

Language:

english

File:

PDF, 1.62 MB

english, 2011

60

SPIE Proceedings [SPIE OE LASE'87 and EO Imaging Symp (January 1987, Los Angeles) - Los Angeles, CA (Monday 12 January 1987)] Imaging Sensors and Displays - Helmet Mounted Display For Tank Applications

Brooks III, Robert L., Freeman, Charles

Year:

1987

Language:

english

File:

PDF, 3.60 MB

english, 1987

61

Can molecular dynamics simulations provide high-resolution refinement of protein structure?

Jianhan Chen, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 853 KB

english, 2007

62

Methodological advances in molecular dynamics simulations of biological systems

Charles L Brooks III

Journal:

Current Opinion in Structural Biology

Year:

1995

Language:

english

File:

PDF, 578 KB

english, 1995

63

Detailed analysis of grid-based molecular docking: A case study of CDOCKER—A CHARMm-based MD docking algorithm

Guosheng Wu, Daniel H. Robertson, Charles L. Brooks III, Michal Vieth

Journal:

Journal of Computational Chemistry

Year:

2003

Language:

english

File:

PDF, 333 KB

english, 2003

64

Theory and simulation: The control and timescale of structure and reactivity in biological systems: from peptide folding to cellular networks

Charles L Brooks III, David A Case

Journal:

Current Opinion in Structural Biology

Year:

2003

Language:

english

File:

PDF, 64 KB

english, 2003

65

Helicity, Circular Dichroism and Molecular Dynamics of Proteins

Jonathan D. Hirst, Charles L. Brooks III

Journal:

Journal of Molecular Biology

Year:

1994

File:

PDF, 398 KB

1994

66

Exploring Global Distortions of Biological Macromolecules and Assemblies from Low-resolution Structural Information and Elastic Network Theory

Florence Tama, Willy Wriggers, Charles L. Brooks III

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 510 KB

english, 2002

67

The origins of asymmetry in the folding transition states of protein L and protein G

John Karanicolas, Charles L. Brooks III

Journal:

Protein Science

Year:

2002

Language:

english

File:

PDF, 400 KB

english, 2002

68

Tuning RNA folding and function through rational design of junction topology

Daher, May, Mustoe, Anthony M., Morriss-Andrews, Alex, Brooks III, Charles L., Walter, Nils G.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 2.21 MB

english, 2017

69

Studying protein folding on the Grid: experiences using CHARMM on NPACI resources under Legion

Anand Natrajan, Michael Crowley, Nancy Wilkins-Diehr, Marty A. Humphrey, Anthony D. Fox, Andrew S. Grimshaw, Charles L. Brooks III

Journal:

Concurrency and Computation: Practice and Experience

Year:

2004

Language:

english

File:

PDF, 277 KB

english, 2004

70

Hydrophobic Cooperativity as a Mechanism for Amyloid Nucleation

Ronald D. Hills Jr., Charles L. Brooks III

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 375 KB

english, 2007

71

Performance comparison of generalized born and Poisson methods in the calculation of electrostatic solvation energies for protein structures

Michael Feig, Alexey Onufriev, Michael S. Lee, Wonpil Im, David A. Case, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2004

Language:

english

File:

PDF, 205 KB

english, 2004

72

Old wine in new bottles?

Kim A Sharp, Charles L Brooks III

Journal:

Current Opinion in Structural Biology

Year:

2001

Language:

english

File:

PDF, 37 KB

english, 2001

73

Invariant Polymorphism in Virus Capsid Assembly

Nguyen, Hung D., Reddy, Vijay S., Brooks III, Charles L.

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 2.35 MB

english, 2009

74

Scaling behavior of atomic motions: Fractal analysis of particle trajectories

Brooks III, Charles L.

Journal:

Physical Review A

Year:

1987

Language:

english

File:

PDF, 228 KB

english, 1987

75

Virtual rigid body dynamics

Teresa Head-Cordon, Charles L. Brooks III

Journal:

Year:

1991

Language:

english

File:

PDF, 1.96 MB

english, 1991

76

Application of torsion angle molecular dynamics for efficient sampling of protein conformations

Jianhan Chen, Wonpil Im, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2005

Language:

english

File:

PDF, 542 KB

english, 2005

77

Conformational flexibility in free energy simulations

Douglas J. Tobias, Charles L. Brooks III, Stephen H. Fleischman

Journal:

Chemical Physics Letters

Year:

1989

Language:

english

File:

PDF, 451 KB

english, 1989

78

Receptor rigidity and ligand mobility in trypsin–ligand complexes

Olgun Guvench, Daniel J. Price, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2005

Language:

english

File:

PDF, 353 KB

english, 2005

79

Gatekeepers in the Ribosomal Protein S6: Thermodynamics, Kinetics, and Folding Pathways Revealed by a Minimalist Protein Model

Antitsa D. Stoycheva, Charles L. Brooks III, José N. Onuchic

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 886 KB

english, 2004

80

Editorial

Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2005

Language:

english

File:

PDF, 25 KB

english, 2005

81

Protein–drug interactions: Characterization of inhibitor binding in complexes of DHFR with trimethoprim and related derivatives

Stephen H. Fleischmann, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1990

Language:

english

File:

PDF, 921 KB

english, 1990

82

Accurate reconstruction of all-atom protein representations from side-chain-based low-resolution models

Michael Feig, Piotr Rotkiewicz, Andrzej Kolinski, Jeffrey Skolnick, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2000

Language:

english

File:

PDF, 305 KB

english, 2000

83

MATCH: An atom-typing toolset for molecular mechanics force fields

Joseph D. Yesselman, Daniel J. Price, Jennifer L. Knight, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2012

Language:

english

File:

PDF, 857 KB

english, 2012

84

Modern protein force fields behave comparably in molecular dynamics simulations

Daniel J. Price, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2002

Language:

english

File:

PDF, 596 KB

english, 2002

85

Prediction of protein loop conformations using multiscale modeling methods with physical energy scoring functions

Mark A. Olson, Michael Feig, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

2008

Language:

english

File:

PDF, 1.01 MB

english, 2008

86

FoldGPCR: Structure prediction protocol for the transmembrane domain of G protein-coupled receptors from class A

Mayako Michino, Jianhan Chen, Raymond C. Stevens, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 405 KB

english, 2010

87

Steric and thermodynamic limits of design for the incorporation of large unnatural amino acids in aminoacyl-tRNA synthetase enzymes

Roger S. Armen, Stefan M. Schiller, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.53 MB

english, 2010

88

Prediction of Quaternary Structure of Coiled Coils. Application to Mutants of the GCN4 Leucine Zipper

Michal Vieth, Andrzej Kolinski, Charles L. Brooks III, Jeffrey Skolnick

Journal:

Journal of Molecular Biology

Year:

1995

Language:

english

File:

PDF, 1.73 MB

english, 1995

89

Improved Gō-like Models Demonstrate the Robustness of Protein Folding Mechanisms Towards Non-native Interactions

John Karanicolas, Charles L. Brooks III

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 8.75 MB

english, 2003

90

Deciphering protein evolution and fitness landscapes with latent space models

Ding, Xinqiang, Zou, Zhengting, Brooks III, Charles L.

Journal:

Nature Communications

Year:

2019

File:

PDF, 4.25 MB

2019

91

ChemInform Abstract: Evolution and Physics in Comparative Protein Structure Modeling

Andras Fiser, Michael Feig, Charles L. Brooks III, Andrej Sali

Journal:

Year:

2002

File:

PDF, 24 KB

2002

92

Predicting structurally conserved contacts for homologous proteins using sequence conservation filters

Mayako Michino, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 403 KB

english, 2009

93

A reexamination of the hydrophobic effect: Exploring the role of the solvent model in computing the methane–methane potential of mean force

Young, William S., Brooks III, Charles L.

Journal:

The Journal of Chemical Physics

Year:

1997

Language:

english

File:

PDF, 435 KB

english, 1997

94

Molecular Interactions between Graphene and Biological Molecules

Zou, Xingquan, Wei, Shuai, Jasensky, Joshua, Xiao, Minyu, Wang, Qiuming, Brooks III, Charles L., Chen, Zhan

Journal:

Journal of the American Chemical Society

Year:

2017

Language:

english

File:

PDF, 2.39 MB

english, 2017

95

Implementation of a data parallel, logical domain decomposition method for interparticle interactions in molecular dynamics of structured molecular fluids

William S. Young, Charles L. Brooks III

Journal:

Journal of Computational Chemistry

Year:

1994

Language:

english

File:

PDF, 828 KB

english, 1994

96

De novo Folding of Membrane Proteins: An Exploration of the Structure and NMR Properties of the fd Coat Protein

Wonpil Im, Charles L. Brooks III

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 806 KB

english, 2004

97

A General Method to Quantify Quasi-equivalence in Icosahedral Viruses

K.V. Damodaran, Vijay S. Reddy, John E. Johnson, Charles L. Brooks III

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 2.93 MB

english, 2002

98

Constant-pH molecular dynamics using continuous titration coordinates

Michael S. Lee, Freddie R. Salsbury Jr., Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 203 KB

english, 2004

99

New technology and numerical weather prediction — a wasted opportunity?

Harold E. Brooks, Charles A. Doswell III

Journal:

Year:

1993

Language:

english

File:

PDF, 529 KB

english, 1993

100

Globe rupture with post cataract–surgery safety sunglasses

Clifford W. Brooks III, Robert C. Howard, Robert A. Lyons, Charles D. Reilly

Journal:

Journal of Cataract & Refractive Surgery

Year:

2010

Language:

english

File:

PDF, 357 KB

english, 2010

To build up a library is to create a life. It’s never just a random collection of books.

— Carlos María Domínguez

Official channel

Z-Library Desktop Launcher

Z-Library Since 2009 support@1delivery.pm

EnglishРусскийEspañolItalianoελληνικάاللغة العربيةBahasa IndonesiaBahasa Malaysiaहिन्दीDeutschFrançaisPortuguêsУкраїнськаPolski中文繁體中文日本語Tiếng ViệtAzərbaycan DiliՀայոց լեզուภาษาไทยTürk Diliქართველიবাংলাپښتوతెలుగుاردو한국어SrpskiБългарски