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51

Characterization of substrate binding and catalysis in the potential antibacterial target N-acetylglucosamine-1-phosphate uridyltransferase (GlmU)

Igor Mochalkin, Sandra Lightle, Yaqi Zhu, Jeffrey F. Ohren, Cindy Spessard, Nickolay Y. Chirgadze, Craig Banotai, Michael Melnick, Laura McDowell

Journal:

Protein Science

Year:

2007

Language:

english

File:

PDF, 524 KB

english, 2007

52

The crystal structures of human α-thrombin complexed with active site-directed diamino benzo[b] thiophene derivatives: A binding mode for a structurally novel class of inhibitors

N.Y. Chirgadze, D.J. Sall, S.L. Briggs, D.K. Clawson, M. Zhang, G.F. Smith, R.W. Schevitz

Journal:

Protein Science

Year:

2000

Language:

english

File:

PDF, 2.61 MB

english, 2000

53

Indole Inhibitors of Human Nonpancreatic Secretory Phospholipase A2. 1. Indole-3-acetamides

Dillard, Robert D., Bach, Nicholas J., Draheim, Susan E., Berry, Dennis R., Carlson, Donald G., Chirgadze, Nickolay Y., Clawson, David K., Hartley, Lawrence W., Johnson, Lea M., Jones, Noel D.

Journal:

Journal of Medicinal Chemistry

Year:

1996

Language:

english

File:

PDF, 882 KB

english, 1996

54

A Single Sequence Change Destabilizes the Influenza Virus Neuraminidase Tetramer

Joseph M Colacino, Nickolay Y Chirgadze, Elspeth Garman, K.Gopal Murti, Richard J Loncharich, Angela J Baxter, Kirk A Staschke, W.Graeme Laver

Journal:

Year:

1997

Language:

english

File:

PDF, 1.55 MB

english, 1997

55

Purification, characterization and preliminary X-ray study of fumarase from Saccharomyces cerevisiae

Jan S. Keruchenko, Irina D. Keruchenko, Kirill L. Gladilin, Vyacheslav N. Zaitsev, Nickolai Y. Chirgadze

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1992

Language:

english

File:

PDF, 1.38 MB

english, 1992

56

Snapshot of Protein Structure Evolution Reveals Conservation of Functional Dimerization through Intertwined Folding

Dimitri Y Chirgadze, Mykhaylo Demydchuk, Marion Becker, Stephen Moran, Massimo Paoli

Journal:

Year:

2004

Language:

english

File:

PDF, 268 KB

english, 2004

57

Knowledge-Based Real-Space Explorations for Low-Resolution Structure Determination

Nicholas Furnham, Andrew S. Doré, Dimitri Y. Chirgadze, Paul I.W. de Bakker, Mark A. DePristo, Tom L. Blundell

Journal:

Year:

2006

Language:

english

File:

PDF, 395 KB

english, 2006

58

The Crystal Structure of the N-Terminal Region of BUB1 Provides Insight into the Mechanism of BUB1 Recruitment to Kinetochores

Victor M. Bolanos-Garcia, Tomomi Kiyomitsu, Sheena D'Arcy, Dimitri Y. Chirgadze, J. Günter Grossmann, Dijana Matak-Vinkovic, Ashok R. Venkitaraman, Mitsuhiro Yanagida, Carol V. Robinson, Tom L. Blunde

Journal:

Year:

2009

Language:

english

File:

PDF, 2.20 MB

english, 2009

59

Interferon-Inducible Protein 16: Insight into the Interaction with Tumor Suppressor p53

Jack C.C. Liao, Robert Lam, Vaclav Brazda, Shili Duan, Mani Ravichandran, Justin Ma, Ting Xiao, Wolfram Tempel, Xiaobing Zuo, Yun-Xing Wang, Nickolay Y. Chirgadze, Cheryl H. Arrowsmith

Journal:

Year:

2011

Language:

english

File:

PDF, 1.27 MB

english, 2011

60

Structure of a Blinkin-BUBR1 Complex Reveals an Interaction Crucial for Kinetochore-Mitotic Checkpoint Regulation via an Unanticipated Binding Site

Victor M. Bolanos-Garcia, Tiziana Lischetti, Dijana Matak-Vinković, Ernesto Cota, Pete J. Simpson, Dimitri Y. Chirgadze, David R. Spring, Carol V. Robinson, Jakob Nilsson, Tom L. Blundell

Journal:

Year:

2011

Language:

english

File:

PDF, 1.37 MB

english, 2011

61

Structure of a Blinkin-BUBR1 Complex Reveals an Interaction Crucial for Kinetochore-Mitotic Checkpoint Regulation via an Unanticipated Binding Site

Victor M. Bolanos-Garcia, Tiziana Lischetti, Dijana Matak-Vinković, Ernesto Cota, Pete J. Simpson, Dimitri Y. Chirgadze, David R. Spring, Carol V. Robinson, Jakob Nilsson, Tom L. Blundell

Journal:

Year:

2011

Language:

english

File:

PDF, 144 KB

english, 2011

62

Structural Insights into the Role of Domain Flexibility in Human DNA Ligase IV

Takashi Ochi, Qian Wu, Dimitri Y. Chirgadze, J. Günter Grossmann, Victor M. Bolanos-Garcia, Tom L. Blundell

Journal:

Year:

2012

Language:

english

File:

PDF, 1.32 MB

english, 2012

63

Binding Regularities in Complexes of Transcription Factors with Operator DNA: Homeodomain Family

Chirgadze, Yu. N., Zheltukhin, E. I., Polozov, R. V., Sivozhelezov, V. S., Ivanov, V. V.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2009

Language:

english

File:

PDF, 2.87 MB

english, 2009

64

Crystal structure of calf eye lens gamma-crystallin IIIb at 2·5 Å resolution: Its relation to function

Y.U. Chirgadze, N. Nevskaya, E. Vernoslova, S. Nikonov, Y.U. Sergeev, E. Brazhnikov, N. Fomenkova, V. Lunin, A. Urzhumtsev

Journal:

Experimental Eye Research

Year:

1991

Language:

english

File:

PDF, 984 KB

english, 1991

65

Functionally important point mutations in the eye lens gamma crystallins of mammals

Yu.N. Chirgadze

Journal:

Experimental Eye Research

Year:

1992

Language:

english

File:

PDF, 127 KB

english, 1992

66

Secondary structure of Na+, K+-dependent adenosine triphosphatase

E.V. Brazhnikov, A.B. Chetverin, Yu.N. Chirgadze

Journal:

Year:

1978

Language:

english

File:

PDF, 374 KB

english, 1978

67

Structure of γ-crystallin IIIb from calf lens at 5 Å resolution

Yu.N. Chirgadze, V.D. Oreshin, Yu.V. Sergeev, S.V. Nikonov, V.Yu. Lunin

Journal:

Year:

1980

Language:

english

File:

PDF, 288 KB

english, 1980

68

Polypeptide chain pathway in γ-crystallin IIIb from calf lens at 3 Å resolution

Yu.N. Chirgadze, Yu.V. Sergeev, N.P. Fomenkova, V.D. Oreshin

Journal:

Year:

1981

Language:

english

File:

PDF, 206 KB

english, 1981

69

Structure of an Xrcc4–DNA ligase IV yeast ortholog complex reveals a novel BRCT interaction mode

Andrew S. Doré, Nicholas Furnham, Owen R. Davies, Bancinyane L. Sibanda, Dimitri Y. Chirgadze, Stephen P. Jackson, Luca Pellegrini, Tom L. Blundell

Journal:

Year:

2006

Language:

english

File:

PDF, 569 KB

english, 2006

70

Crystal Structures of Yersinia enterocolitica Salicylate Synthase and its Complex with the Reaction Products Salicylate and Pyruvate

Olivier Kerbarh, Dimitri Y. Chirgadze, Tom L. Blundell, Chris Abell

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 723 KB

english, 2006

71

Molecular Basis of the Antimutagenic Activity of the House-Cleaning Inosine Triphosphate Pyrophosphatase RdgB from Escherichia coli

Alexei Savchenko, Michael Proudfoot, Tatiana Skarina, Alexander Singer, Olga Litvinova, Ruslan Sanishvili, Greg Brown, Nickolay Chirgadze, Alexander F. Yakunin

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.27 MB

english, 2007

72

The Crystal Structure of Bacteriophage HK97 gp6: Defining a Large Family of Head–Tail Connector Proteins

Lia Cardarelli, Robert Lam, Ashleigh Tuite, Lindsay A. Baker, Paul D. Sadowski, Devon R. Radford, John L. Rubinstein, Kevin P. Battaile, Nickolay Chirgadze, Karen L. Maxwell, Alan R. Davidson

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 2.44 MB

english, 2010

73

Crystal Structure of the Passenger Domain of the Escherichia coli Autotransporter EspP

Shekeb Khan, Hira S. Mian, Linda E. Sandercock, Nickolay Y. Chirgadze, Emil F. Pai

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.88 MB

english, 2011

74

Insights into the structure of hepatocyte growth factor/scatter factor (HGF/SF) and implications for receptor activation

Dimitri Y Chirgadze, Jonathan Hepple, R.Andrew Byrd, R Sowdhamini, Tom L Blundell, Ermanno Gherardi

Journal:

Year:

1998

Language:

english

File:

PDF, 253 KB

english, 1998

75

A New Crystal Form of the NK1 Splice Variant of HGF/SF Demonstrates Extensive Hinge Movement and Suggests That the NK1 Dimer Originates by Domain Swapping

Keiichi Watanabe, Dimitri Y. Chirgadze, Daniel Lietha, Hugo de Jonge, Tom L. Blundell, Ermanno Gherardi

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 241 KB

english, 2002

76

Indole Inhibitors of Human Nonpancreatic Secretory Phospholipase A 2 . 3. Indole-3-glyoxamides

Draheim, Susan E., Bach, Nicholas J., Dillard, Robert D., Berry, Dennis R., Carlson, Donald G., Chirgadze, Nickolay Y., Clawson, David K., Hartley, Lawrence W., Johnson, Lea M., Jones, Noel D., McKinn

Journal:

Journal of Medicinal Chemistry

Year:

1996

Language:

english

File:

PDF, 724 KB

english, 1996

77

Intramolecular distortion of the α-helical structure of polypeptides

Yu.N. Chirgadze, E.V. Brazhnikov, N.A. Nevskaya

Journal:

Journal of Molecular Biology

Year:

1976

Language:

english

File:

PDF, 831 KB

english, 1976

78

Crystallographic study of plastocyanins

Yuri N. Chirgadze, Marina B. Garber, Stanislav V. Nikonov

Journal:

Journal of Molecular Biology

Year:

1977

Language:

english

File:

PDF, 3.14 MB

english, 1977

79

The use of deuterium exchange for the study of the distortion of α-helices in proteins

Evgeni V. Brazhnikov, Yuri N. Chirgadze

Journal:

Journal of Molecular Biology

Year:

1978

Language:

english

File:

PDF, 648 KB

english, 1978

80

Crystallographic study of the large tryptic fragments of elongation factor G from Escherichia coli

Ludmila S. Reshetnikova, Marina B. Garber, Natalia P. Fomenkova, Stanislav V. Nikonov, Yuri N. Chirgadze

Journal:

Journal of Molecular Biology

Year:

1982

Language:

english

File:

PDF, 1.01 MB

english, 1982

81

Crystallographic study of γ-crystallins from calf lens

Yuri N. Chirgadze, Stanislav V. Nikonov, Marina B. Garber, Ludmila S. Reshetnikova

Journal:

Journal of Molecular Biology

Year:

1977

Language:

english

File:

PDF, 593 KB

english, 1977

82

Crystallographic study of elongation factor G from Thermus thermophilus HB8

Yu.N. Chirgadze, S.V. Nikonov, E.V. Brazhnikov, M.B. Garber, L.S. Reshetnikova

Journal:

Journal of Molecular Biology

Year:

1983

Language:

english

File:

PDF, 172 KB

english, 1983

83

Structure-Based Design of Potent, Amidine-Derived Inhibitors of Factor Xa: Evaluation of Selectivity, Anticoagulant Activity, and Antithrombotic Activity

Wiley, Michael R., Weir, Leonard C., Briggs, Steven, Bryan, Nancy A., Buben, John, Campbell, Charles, Chirgadze, Nickolay Y., Conrad, Richard C., Craft, Trelia J., Ficorilli, James V., Franciskovich,

Journal:

Journal of Medicinal Chemistry

Year:

2000

Language:

english

File:

PDF, 642 KB

english, 2000

84

Viracept (Nelfinavir Mesylate, AG1343): A Potent, Orally Bioavailable Inhibitor of HIV-1 Protease

Kaldor, Stephen W., Kalish, Vincent J., Davies, Jay F., Shetty, Bhasker V., Fritz, James E., Appelt, Krzysztof, Burgess, Jeffrey A., Campanale, Kristina M., Chirgadze, Nickolay Y., Clawson, David K.,

Journal:

Journal of Medicinal Chemistry

Year:

1997

Language:

english

File:

PDF, 257 KB

english, 1997

85

Mapping protein and nucleic acid structure

Bednyakov, I. V., Zrelov, P. V., Ivanov, V. V., Polozov, R. V., Sivozhelezov, V. S., Stepanenko, V. A., Chirgadze, Yu. N.

Journal:

Physics of Particles and Nuclei Letters

Year:

2013

Language:

english

File:

PDF, 442 KB

english, 2013

86

Recognition Rules for Binding of Homeodomains to Operator DNA

Chirgadze, Yu. N., Sivozhelezov, V. S., Polozov, R. V., Stepanenko, V. A., Ivanov, V. V.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2012

Language:

english

File:

PDF, 1.74 MB

english, 2012

87

Database of amino acid-nucleotide contacts in contacts in DNA-homeodomain protein

Grokhlina, T. I., Zrelov, P. V., Ivanov, V. V., Polozov, R. V., Chirgadze, Yu. N., Sivozhelezov, V. S.

Journal:

Physics of Particles and Nuclei Letters

Year:

2013

Language:

english

File:

PDF, 373 KB

english, 2013

88

Expanding the Solvent Chemical Space for Self-Assembly of Dipeptide Nanostructures

Mason, Thomas O., Chirgadze, Dimitri Y., Levin, Aviad, Adler-Abramovich, Lihi, Gazit, Ehud, Knowles, Tuomas P. J., Buell, Alexander K.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.16 MB

english, 2014

89

Crystallization and preliminary X-ray crystallographic data of a histidine-binding protein from Escherichia coli

Trakhanov, S.D., Chirgadze, N.Yu., Yusifov, E.F.

Journal:

Journal of Molecular Biology

Year:

1989

Language:

english

File:

PDF, 257 KB

english, 1989

90

A Conserved Spiral Structure for Highly Diverged Phage Tail Assembly Chaperones

Pell, Lisa G., Cumby, Nichole, Clark, Teresa E., Tuite, Ashleigh, Battaile, Kevin P., Edwards, Aled M., Chirgadze, Nickolay Y., Davidson, Alan R., Maxwell, Karen L.

Journal:

Journal of Molecular Biology

Year:

2013

Language:

english

File:

PDF, 3.18 MB

english, 2013

91

Crystal structure of folliculin reveals a hidDENN function in genetically inherited renal cancer

Nookala, R. K., Langemeyer, L., Pacitto, A., Ochoa-Montano, B., Donaldson, J. C., Blaszczyk, B. K., Chirgadze, D. Y., Barr, F. A., Bazan, J. F., Blundell, T. L.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.21 MB

english, 2012

92

Crystal Structure and Molecular Imaging of the Nav Channel 3 Subunit Indicates a Trimeric Assembly

Namadurai, S., Balasuriya, D., Rajappa, R., Wiemhofer, M., Stott, K., Klingauf, J., Edwardson, J. M., Chirgadze, D. Y., Jackson, A. P.

Journal:

Journal of Biological Chemistry

Year:

2014

Language:

english

File:

PDF, 5.15 MB

english, 2014

93

Dibasic Benzo[ b ]thiophene Derivatives as a Novel Class of Active Site-Directed Thrombin Inhibitors. 1. Determination of the Serine Protease Selectivity, Structure−Activity Relationships, and Binding Orientation

Sall, Daniel J., Bastian, Jolie A., Briggs, Stephen L., Buben, John A., Chirgadze, Nickolay Y., Clawson, David K., Denney, Michael L., Giera, Deborah D., Gifford-Moore, Donetta S., Harper, Richard W.,

Journal:

Journal of Medicinal Chemistry

Year:

1997

Language:

english

File:

PDF, 243 KB

english, 1997

94

Optical Rotatory Dispersion of Polypeptides and Proteins in the near-Infrared Region

Venyaminov, S. Yu., Chirgadze, Yu. N.

Journal:

Year:

1973

Language:

english

File:

PDF, 309 KB

english, 1973

95

A Nanobody Binding to Non-Amyloidogenic Regions of the Protein Human Lysozyme Enhances Partial Unfolding but Inhibits Amyloid Fibril Formation

De Genst, Erwin, Chan, Pak-Ho, Pardon, Els, Hsu, Shang-Te D., Kumita, Janet R., Christodoulou, John, Menzer, Linda, Chirgadze, Dimitri Y., Robinson, Carol V., Muyldermans, Serge, Matagne, André, Wyns,

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 4.73 MB

english, 2013

96

Investigations into Protein Crystallization in the Presence of a Strong Magnetic Field

Surade, Sachin, Ochi, Takashi, Nietlispach, Daniel, Chirgadze, Dima, Moreno, Abel

Journal:

Crystal Growth & Design

Year:

2010

Language:

english

File:

PDF, 3.13 MB

english, 2010

97

The Crystal Structure of Fibroblast Growth Factor (FGF) 19 Reveals Novel Features of the FGF Family and Offers a Structural Basis for Its Unusual Receptor Affinity †,‡

Harmer, Nicholas J., Pellegrini, Luca, Chirgadze, Dima, Fernandez-Recio, Juan, Blundell, Tom L.

Journal:

Year:

2004

Language:

english

File:

PDF, 1.13 MB

english, 2004

98

Indole Inhibitors of Human Nonpancreatic Secretory Phospholipase A 2 . 2. Indole-3-acetamides with Additional Functionality

Dillard, Robert D., Bach, Nicholas J., Draheim, Susan E., Berry, Dennis R., Carlson, Donald G., Chirgadze, Nickolay Y., Clawson, David K., Hartley, Lawrence W., Johnson, Lea M., Jones, Noel D., McKinn

Journal:

Journal of Medicinal Chemistry

Year:

1996

Language:

english

File:

PDF, 1.06 MB

english, 1996

99

Helix-stabilized cyclic peptides as selective inhibitors of steroid receptor-coactivator interactions

Leduc, A.-M., Trent, J. O., Wittliff, J. L., Bramlett, K. S., Briggs, S. L., Chirgadze, N. Y., Wang, Y., Burris, T. P., Spatola, A. F.

Journal:

Proceedings of the National Academy of Sciences

Year:

2003

Language:

english

File:

PDF, 389 KB

english, 2003

100

Characteristics of a Monoclonal Antibody to the Thyrotropin Receptor that Acts as a Powerful Thyroid-Stimulating Autoantibody Antagonist

Sanders, J., Allen, F., Jeffreys, J., Bolton, J., Richards, T., Depraetere, H., Nakatake, N., Evans, M., Kiddie, A., Premawardhana, L.D.K.E., Chirgadze, D.Y., Miguel, R. Núñez, Blundell, T.L., Furmani

Journal:

Year:

2005

Language:

english

File:

PDF, 268 KB

english, 2005

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