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1

Molecular paleontology and complexity in the last eukaryotic common ancestor

Koumandou, V. Lila, Wickstead, Bill, Ginger, Michael L., van der Giezen, Mark, Dacks, Joel B., Field, Mark C.

Journal:

Critical Reviews in Biochemistry and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 1.22 MB

english, 2013

2

Phylogenetic and Primary Sequence Characterization of Cathepsin B Cysteine Proteases from the Oxymonad Flagellate Monocercomonoides

JOEL B. DACKS, TEKLU KURU, NATALIA A. LIAPOUNOVA, LASHITEW GEDAMU

Journal:

Journal of Eukaryotic Microbiology

Year:

2008

Language:

english

File:

PDF, 759 KB

english, 2008

3

Molecular and phylogenetic characterization of syntaxin genes from parasitic protozoa

Joel B. Dacks, W.Ford Doolittle

Journal:

Molecular and Biochemical Parasitology

Year:

2004

Language:

english

File:

PDF, 626 KB

english, 2004

4

The First Sexual Lineage and the Relevance of Facultative Sex

Joel Dacks, Andrew J. Roger

Journal:

Journal of Molecular Evolution

Year:

1999

Language:

english

File:

PDF, 421 KB

english, 1999

5

Rab protein evolution and the history of the eukaryotic endomembrane system

Andrew Brighouse, Joel B. Dacks, Mark C. Field

Journal:

Cellular and Molecular Life Sciences

Year:

2010

Language:

english

File:

PDF, 644 KB

english, 2010

6

Phylogenetic Placement of Trichonympha

Joel B. Dacks, Rosemary J. Redfield

Journal:

Journal of Eukaryotic Microbiology

Year:

1998

Language:

english

File:

PDF, 307 KB

english, 1998

7

How Oxymonads Lost Their Groove: An Ultrastructural Comparison of Monocercomonoides and Excavate Taxa

ALASTAIR G. B. SIMPSON, RENATE RADEK, JOEL B. DACKS, CHARLES J. O'KELLY

Journal:

Journal of Eukaryotic Microbiology

Year:

2002

Language:

english

File:

PDF, 2.63 MB

english, 2002

8

Molecular Phylogeny of Three Oxymonad Genera: Pyrsonympha, Dinenympha and Oxymonas

SHIGEHARU MORIYA, JOEL B. DACKS, AIKA TAKAGI, SATOKO NODA, MORIYA OHKUMA, W. FORD DOOLITTLE, TOSHIAKI KUDO

Journal:

Journal of Eukaryotic Microbiology

Year:

2003

Language:

english

File:

PDF, 2.39 MB

english, 2003

9

Ultrastructural Description of Breviata anathema, N. Gen., N. Sp., the Organism Previously Studied as “Mastigamoeba invertens”

GISELLE WALKER, JOEL B. DACKS, T. MARTIN EMBLEY

Journal:

Journal of Eukaryotic Microbiology

Year:

2006

Language:

english

File:

PDF, 1.56 MB

english, 2006

10

Massive differential expansion of the Trichomonas vaginalis adaptin genomic complement

JOEL B. DACKS, JANE CARLTON, ROBERT P. HIRT, T. MARTIN EMBLEY

Journal:

Journal of Eukaryotic Microbiology

Year:

2005

Language:

english

File:

PDF, 390 KB

english, 2005

11

Evolution of the Multivesicular Body ESCRT Machinery; Retention Across the Eukaryotic Lineage

Ka Fai Leung, Joel B. Dacks, Mark C. Field

Journal:

Year:

2008

Language:

english

File:

PDF, 887 KB

english, 2008

12

The Single ENTH-Domain Protein of Trypanosomes; Endocytic Functions and Evolutionary Relationship with Epsin

Carme Gabernet-Castello, Joel B. Dacks, Mark C. Field

Journal:

Year:

2009

Language:

english

File:

PDF, 1.22 MB

english, 2009

13

First and last ancestors: reconstructing evolution of the endomembrane system with ESCRTs, vesicle coat proteins, and nuclear pore complexes

Mark C Field, Joel B Dacks

Journal:

Current Opinion in Cell Biology

Year:

2009

Language:

english

File:

PDF, 654 KB

english, 2009

14

Evolution of Filamentous Plant Pathogens: Gene Exchange across Eukaryotic Kingdoms

Thomas A. Richards, Joel B. Dacks, Joanna M. Jenkinson, Christopher R. Thornton, Nicholas J. Talbot

Journal:

Current Biology

Year:

2006

Language:

english

File:

PDF, 864 KB

english, 2006

15

Evolution and diversity of the Golgi body

Kevin Mowbrey, Joel B. Dacks

Journal:

Year:

2009

Language:

english

File:

PDF, 548 KB

english, 2009

16

Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins

V Lila Koumandou, Joel B Dacks, Richard MR Coulson, Mark C Field

Journal:

BMC Evolutionary Biology

Year:

2007

Language:

english

File:

PDF, 798 KB

english, 2007

17

Comparative analysis of plant genomes allows the definition of the "Phytolongins": a novel non-SNARE longin domain protein family

Marco Vedovato, Valeria Rossi, Joel B Dacks, Francesco Filippini

Journal:

Year:

2009

Language:

english

File:

PDF, 1.32 MB

english, 2009

18

Eukaryotic systematics: a user's guide for cell biologists and parasitologists

WALKER, GISELLE, DORRELL, RICHARD G., SCHLACHT, ALEXANDER, DACKS, JOEL B.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.92 MB

english, 2011

19

Evolution of specificity in the eukaryotic endomembrane system

Joel B. Dacks, Andrew A. Peden, Mark C. Field

Journal:

The International Journal of Biochemistry & Cell Biology

Year:

2009

Language:

english

File:

PDF, 627 KB

english, 2009

20

The Genome of Naegleria gruberi Illuminates Early Eukaryotic Versatility

Lillian K. Fritz-Laylin, Simon E. Prochnik, Michael L. Ginger, Joel B. Dacks, Meredith L. Carpenter, Mark C. Field, Alan Kuo, Alex Paredez, Jarrod Chapman, Jonathan Pham, Shengqiang Shu, Rochak Neupan

Journal:

Year:

2010

Language:

english

File:

PDF, 879 KB

english, 2010

21

Hydrogenosomal succinyl-CoA synthetase from the rumen-dwelling fungus Neocallimastix patriciarum; an energy-producing enzyme of mitochondrial origin

Joel B. Dacks, Patricia L. Dyal, T. Martin Embley, Mark van der Giezen

Journal:

Year:

2006

Language:

english

File:

PDF, 759 KB

english, 2006

22

The cloning of one putative octopamine receptor and two putative serotonin receptors from the tobacco hawkmoth, Manduca sexta

Andrew M. Dacks, Joel B. Dacks, Thomas A. Christensen, Alan J. Nighorn

Journal:

Insect Biochemistry and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 619 KB

english, 2006

23

Reconstructing/Deconstructing the Earliest Eukaryotes: How Comparative Genomics Can Help

Joel B. Dacks, W.Ford Doolittle

Journal:

Year:

2001

Language:

english

File:

PDF, 121 KB

english, 2001

24

Implications of the new eukaryotic systematics for parasitologists

Joel B. Dacks, Giselle Walker, Mark C. Field

Journal:

Parasitology International

Year:

2008

Language:

english

File:

PDF, 459 KB

english, 2008

25

Repeated secondary loss of adaptin complex genes in the Apicomplexa

William D. Nevin, Joel B. Dacks

Journal:

Parasitology International

Year:

2009

Language:

english

File:

PDF, 1.26 MB

english, 2009

26

Meeting Report: XIVth Meeting of the International Society for Evolutionary Protistology, Vancouver, Canada, June 19–24, 2002

Joel B. Dacks, Alastair G.B. Simpson

Journal:

Year:

2002

Language:

english

File:

PDF, 57 KB

english, 2002

27

The Mitochondrial Genome and a 60-kb Nuclear DNA Segment from Naegleria fowleri , the Causative Agent of Primary Amoebic Meningoencephalitis

Herman, Emily K., Greninger, Alexander L., Visvesvara, Govinda S., Marciano-Cabral, Francine, Dacks, Joel B., Chiu, Charles Y.

Journal:

Journal of Eukaryotic Microbiology

Year:

2013

Language:

english

File:

PDF, 397 KB

english, 2013

28

Longin and GAF Domains: Structural Evolution and Adaptation to the Subcellular Trafficking Machinery

De Franceschi, Nicola, Wild, Klemens, Schlacht, Alexander, Dacks, Joel B., Sinning, Irmgard, Filippini, Francesco

Journal:

Year:

2014

Language:

english

File:

PDF, 1.68 MB

english, 2014

29

A comparative analysis of trypanosomatid SNARE proteins

Murungi, Edwin, Barlow, Lael D., Venkatesh, Divya, Adung'a, Vincent O., Dacks, Joel B., Field, Mark C., Christoffels, Alan

Journal:

Parasitology International

Year:

2014

Language:

english

File:

PDF, 846 KB

english, 2014

30

Cryptic organelle homology in apicomplexan parasites: insights from evolutionary cell biology

Klinger, Christen M, Nisbet, R Ellen, Ouologuem, Dinkorma T, Roos, David S, Dacks, Joel B

Journal:

Current Opinion in Microbiology

Year:

2013

Language:

english

File:

PDF, 1.55 MB

english, 2013

31

Evolutionary mechanisms for establishing eukaryotic cellular complexity

Mast, Fred D., Barlow, Lael D., Rachubinski, Richard A., Dacks, Joel B.

Journal:

Trends in Cell Biology

Year:

2014

Language:

english

File:

PDF, 477 KB

english, 2014

32

Supplement: Biology Letters || Evidence for Golgi Bodies in Proposed 'Golgi-Lacking' Lineages

Joel B. Dacks, Lesley A. M. Davis, Åsa M. Sjögren, Jan O. Andersson, Andrew J. Roger and W. Ford Doolittle

Journal:

Proceedings Biological Sciences

Year:

2003

Language:

english

File:

PDF, 1.03 MB

english, 2003

33

Bioinformatics and Molecular Evolution.By Paul G Higgs and Teresa K Attwood

Journal:

Quarterly Review of Biology

Year:

2005

Language:

english

File:

PDF, 98 KB

english, 2005

34

Pex3 Peroxisome Biogenesis Proteins Function in Peroxisome Inheritance as Class V Myosin Receptors

Jinlan Chang, Fred D. Mast, Andrei Fagarasanu, Dorian A. Rachubinski, Gary A. Eitzen, Joel B. Dacks and Richard A. Rachubinski

Journal:

The Journal of Cell Biology

Year:

2009

Language:

english

File:

PDF, 3.70 MB

english, 2009

35

Overcoming obstacles to repurposing for neurodegenerative disease

Shineman, Diana W., Alam, John, Anderson, Margaret, Black, Sandra E., Carman, Aaron J., Cummings, Jeffrey L., Dacks, Penny A., Dudley, Joel T., Frail, Donald E., Green, Allan, Lane, Rachel F., Lappin,

Journal:

Annals of Clinical and Translational Neurology

Year:

2014

Language:

english

File:

PDF, 91 KB

english, 2014

36

Ancient Complexity, Opisthokont Plasticity, and Discovery of the 11th Subfamily of Arf GAP Proteins

Schlacht, Alexander, Mowbrey, Kevin, Elias, Marek, Kahn, Richard A., Dacks, Joel B.

Journal:

Year:

2013

Language:

english

File:

PDF, 13.13 MB

english, 2013

37

An ER-directed transcriptional response to unfolded protein stress in the absence of conserved sensor-transducer proteins in Giardia lamblia

Spycher, Cornelia, Herman, Emily K., Morf, Laura, Qi, Weihong, Rehrauer, Hubert, Aquino Fournier, Catharine, Dacks, Joel B., Hehl, Adrian B.

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 846 KB

english, 2013

38

From all to (nearly) none

Barlow, Lael D, Dacks, Joel B, Wideman, Jeremy G

Journal:

Cellular Logistics

Year:

2014

Language:

english

File:

PDF, 4.51 MB

english, 2014

39

A role for adaptor protein complex 1 in protein targeting to rhoptry organelles in Plasmodium falciparum

Kaderi Kibria, K.M., Rawat, Khushboo, Klinger, Christen M., Datta, Gaurav, Panchal, Manoj, Singh, Shailja, Iyer, Gayatri R., Kaur, Inderjeet, Sharma, Veena, Dacks, Joel B., Mohmmed, Asif, Malhotra, Pa

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research

Year:

2015

Language:

english

File:

PDF, 1.72 MB

english, 2015

40

Interaction with the effector dynamin-related protein 1 (Drp1) is an ancient function of Rab32 subfamily proteins

Ortiz-Sandoval, Carolina G, Hughes, Sarah C, Dacks, Joel B, Simmen, Thomas

Journal:

Cellular Logistics

Year:

2014

Language:

english

File:

PDF, 905 KB

english, 2014

41

Ancient Homology of the Mitochondrial Contact Site and Cristae Organizing System Points to an Endosymbiotic Origin of Mitochondrial Cristae

Muñoz-Gómez, Sergio A., Slamovits, Claudio H., Dacks, Joel B., Baier, Kaitlyn A., Spencer, Katelyn D., Wideman, Jeremy G.

Journal:

Current Biology

Year:

2015

Language:

english

File:

PDF, 2.62 MB

english, 2015

42

Phylogenetic Artifacts Can be Caused by Leucine, Serine, and Arginine Codon Usage Heterogeneity: Dinoflagellate Plastid Origins as a Case Study

INAGAKI, YUJI, SIMPSON, ALASTAIR, DACKS, JOEL, ROGER, ANDREW

Journal:

Systematic Biology

Year:

2004

Language:

english

File:

PDF, 969 KB

english, 2004

43

The Fifth Adaptor Protein Complex

Hirst, Jennifer, D. Barlow, Lael, Francisco, Gabriel Casey, Sahlender, Daniela A., Seaman, Matthew N. J., Dacks, Joel B., Robinson, Margaret S., Schmid, Sandra L.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.70 MB

english, 2011

44

Losses, Expansions, and Novel Subunit Discovery of Adaptor Protein Complexes in Haptophyte Algae

Lee, Laura J.Y., Klute, Mary J., Herman, Emily K., Read, Betsy, Dacks, Joel B.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.49 MB

english, 2015

45

Kinetoplastid Phylogenomics Reveals the Evolutionary Innovations Associated with the Origins of Parasitism

Jackson, Andrew P., Otto, Thomas D., Aslett, Martin, Armstrong, Stuart D., Bringaud, Frederic, Schlacht, Alexander, Hartley, Catherine, Sanders, Mandy, Wastling, Jonathan M., Dacks, Joel B., Acosta-Se

Journal:

Current Biology

Year:

2015

Language:

english

File:

PDF, 2.24 MB

english, 2015

46

Tracing the archaeal origins of eukaryotic membrane-trafficking system building blocks

Klinger, Christen M., Spang, Anja, Dacks, Joel B., Ettema, Thijs J.G.

Journal:

Molecular Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 3.97 MB

english, 2016

47

The evolution of MICOS: Ancestral and derived functions and interactions

Muñoz-Gómez, Sergio A, Slamovits, Claudio H, Dacks, Joel B, Wideman, Jeremy G

Journal:

Communicative & Integrative Biology

Year:

2015

Language:

english

File:

PDF, 680 KB

english, 2015

48

Exclusive expression of the Rab11 effector SH3TC2 in Schwann cells links integrin-α6 and myelin maintenance to Charcot-Marie-Tooth disease type 4C

Vijay, Sauparnika, Chiu, Meagan, Dacks, Joel B., Roberts, Rhys C.

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease

Year:

2016

Language:

english

File:

PDF, 1.48 MB

english, 2016

49

Next-generation Sequencing Assessment of Eukaryotic Diversity in Oil Sands Tailings Ponds Sediments and Surface Water

Aguilar, Maria, Richardson, Elisabeth, Tan, BoonFei, Walker, Giselle, Dunfield, Peter, Bass, David, Nesbø, Camilla, Foght, Julia, Dacks, Joel B.

Journal:

Journal of Eukaryotic Microbiology

Year:

2016

Language:

english

File:

PDF, 511 KB

english, 2016

50

Resolving the homology—function relationship through comparative genomics of membrane-trafficking machinery and parasite cell biology

Klinger, Christen M., Ramirez-Macias, Inmaculada, Herman, Emily K., Turkewitz, Aaron P., Field, Mark C., Dacks, Joel B.

Journal:

Molecular and Biochemical Parasitology

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016