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51

Annotation of gene promoters by integrative data-mining of ChIP-seq Pol-II enrichment data

Ravi Gupta, Priyankara Wikramasinghe, Anirban Bhattacharyya, Francisco A Perez, Sharmistha Pal, Ramana V Davuluri

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 904 KB

english, 2010

52

AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsiscis-regulatory elements and transcription factors

Ramana V Davuluri, Hao Sun, Saranyan K Palaniswamy, Nicole Matthews, Carlos Molina, Mike Kurtz, Erich Grotewold

Journal:

BMC Bioinformatics

Year:

2003

Language:

english

File:

PDF, 574 KB

english, 2003

53

Genome-wide analysis of core promoter elements from conserved human and mouse orthologous pairs

Victor X Jin, Gregory AC Singer, Francisco J Agosto-Pérez, Sandya Liyanarachchi, Ramana V Davuluri

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 365 KB

english, 2006

54

A novel tissue-specific meta-analysis approach for gene expression predictions, initiated with a mammalian gene expression testis database

Kshitish K Acharya, Darshan S Chandrashekar, Neelima Chitturi, Hardik Shah, Varun Malhotra, KS Sreelakshmi, H Deepti, Akhilesh Bajpai, Sravanthi Davuluri, Pranami Bora, Leena Rao

Journal:

Year:

2010

Language:

english

File:

PDF, 276 KB

english, 2010

55

Genomic structure and alternative splicing of murine R2B receptor protein tyrosine phosphatases (PTPκ, μ, ρ and PCP-2)

Julie Besco, Magdalena C Popesco, Ramana V Davuluri, Adrienne Frostholm, Andrej Rotter

Journal:

Year:

2004

Language:

english

File:

PDF, 2.28 MB

english, 2004

56

Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array

Gregory AC Singer, Jiejun Wu, Pearlly Yan, Christoph Plass, Tim HM Huang, Ramana V Davuluri

Journal:

Year:

2008

Language:

english

File:

PDF, 386 KB

english, 2008

57

Smooth muscle caldesmon modulates peristalsis in the wild type and non-innervated zebrafish intestine

J. Abrams, G. Davuluri, C. Seiler, M. Pack

Journal:

Neurogastroenterology & Motility

Year:

2012

Language:

english

File:

PDF, 759 KB

english, 2012

58

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection

Deng, Zhong, Wang, Zhuo, Stong, Nick, Plasschaert, Robert, Moczan, Aliah, Chen, Horng-Shen, Hu, Sufeng, Wikramasinghe, Priyankara, Davuluri, Ramana V, Bartolomei, Marisa S, Riethman, Harold, Lieberman

Journal:

The EMBO Journal

Year:

2012

Language:

english

File:

PDF, 2.73 MB

english, 2012

59

MicroRNAs, ultraconserved genes and colorectal cancers

Simona Rossi, Scott Kopetz, Ramana Davuluri, Stanley R. Hamilton, George A. Calin

Journal:

The International Journal of Biochemistry & Cell Biology

Year:

2010

Language:

english

File:

PDF, 528 KB

english, 2010

60

Combinatorial Analysis of Transcription Factor Partners Reveals Recruitment of c-MYC to Estrogen Receptor-α Responsive Promoters

Alfred S.L. Cheng, Victor X. Jin, Meiyun Fan, Laura T. Smith, Sandya Liyanarachchi, Pearlly S. Yan, Yu-Wei Leu, Michael W.Y. Chan, Christoph Plass, Kenneth P. Nephew, Ramana V. Davuluri, Tim H.-M. Hua

Journal:

Year:

2006

Language:

english

File:

PDF, 711 KB

english, 2006

61

Can digital rectal examination or transrectal ultrasonography biopsy findings predict the side of nodal metastasis in prostate cancer?

Philippe E. Spiess, Joseph E. Busby, Jennifer J. Jordan, Jordan R. Steinberg, Roland L. Bassett, Raj Davuluri, Kristina Burt, Patricia Troncoso, Andrew K. Lee, Sarah H. Taylor, Louis L. Pisters

Journal:

Urologic Oncology: Seminars and Original Investigations

Year:

2008

Language:

english

File:

PDF, 99 KB

english, 2008

62

A NotI–EcoRV promoter library for studies of genetic and epigenetic alterations in mouse models of human malignancies

Li Yu, Chunhui Liu, Kristi Bennett, Yue-Zhong Wu, Zunyan Dai, Jeff Vandeusen, Rene Opavsky, Aparna Raval, Prashant Trikha, Ben Rodriguez, Brian Becknell, Charlene Mao, Stephen Lee, Ramana V. Davuluri,

Journal:

Year:

2004

Language:

english

File:

PDF, 546 KB

english, 2004

63

Myopic astigmatism and presbyopia trial

Howard Savage, Micah Rothstein, Geeta Davuluri, Laure El Ghormli, Deneen M Zaetta

Journal:

American Journal of Ophthalmology

Year:

2003

Language:

english

File:

PDF, 90 KB

english, 2003

64

PML Is a Direct p53 Target that Modulates p53 Effector Functions

Elisa de Stanchina, Emmanuelle Querido, Masako Narita, Ramana V Davuluri, Pier Paolo Pandolfi, Gerardo Ferbeyre, Scott W Lowe

Journal:

Year:

2004

Language:

english

File:

PDF, 546 KB

english, 2004

65

A Founding Locus within the RET Proto-Oncogene May Account for a Large Proportion of Apparently Sporadic Hirschsprung Disease and a Subset of Cases of Sporadic Medullary Thyroid Carcinoma

Salud Borrego, Fred A. Wright, Raquel M. Fernández, Nita Williams, Manuel López-Alonso, Ramana Davuluri, Guillermo Antiñolo, Charis Eng

Journal:

The American Journal of Human Genetics

Year:

2003

Language:

english

File:

PDF, 675 KB

english, 2003

66

Alternative transcription and alternative splicing in cancer

Sharmistha Pal, Ravi Gupta, Ramana V. Davuluri

Journal:

Pharmacology & Therapeutics

Year:

2012

Language:

english

File:

PDF, 836 KB

english, 2012

67

The Nuclear Pore Complex Protein Elys Is Required for Genome Stability in Mouse Intestinal Epithelial Progenitor Cells

Nan Gao, Gangarao Davuluri, Weilong Gong, Christoph Seiler, Kristin Lorent, Emma E. Furth, Klaus H. Kaestner, Michael Pack

Journal:

Gastroenterology

Year:

2011

Language:

english

File:

PDF, 5.85 MB

english, 2011

68

Sequencing and analysis of a South Asian-Indian personal genome

Gupta, Ravi, Ratan, Aakrosh, Rajesh, Changanamkandath, Chen, Rong, Kim, Hie Lim, Burhans, Richard, Miller, Webb, Santhosh, Sam, Davuluri, Ramana V, Butte, Atul J, Schuster, Stephan C, Seshagiri, Somas

Journal:

Year:

2012

Language:

english

File:

PDF, 908 KB

english, 2012

69

Genome-wide analysis of host-chromosome binding sites for Epstein-Barr Virus Nuclear Antigen 1 (EBNA1)

Fang Lu, Priyankara Wikramasinghe, Julie Norseen, Kevin Tsai, Pu Wang, Louise Showe, Ramana V Davuluri, Paul M Lieberman

Journal:

Virology Journal

Year:

2010

Language:

english

File:

PDF, 5.30 MB

english, 2010

70

Biomedical Informatics for Cancer Research || MeV: MultiExperiment Viewer

Ochs, Michael F., Casagrande, John T., Davuluri, Ramana V.

Year:

2010

Language:

english

File:

PDF, 596 KB

english, 2010

71

A MicroRNA Signature of Hypoxia

Kulshreshtha, R., Ferracin, M., Wojcik, S. E., Garzon, R., Alder, H., Agosto-Perez, F. J., Davuluri, R., Liu, C.-G., Croce, C. M., Negrini, M., Calin, G. A., Ivan, M.

Journal:

Molecular and Cellular Biology

Year:

2007

Language:

english

File:

PDF, 553 KB

english, 2007

72

Biomedical Informatics for Cancer Research || Clinical Research Systems and Integration with Medical Systems

Ochs, Michael F., Casagrande, John T., Davuluri, Ramana V.

Year:

2010

Language:

english

File:

PDF, 341 KB

english, 2010

73

Switching between superluminal to subluminal velocities and Tunable slow light in a four level atomic system

Davuluri, Sankar, Rostovtsev, Yuri V

Journal:

Journal of Physics Conference Series

Year:

2013

Language:

english

File:

PDF, 605 KB

english, 2013

74

SPIE Proceedings [SPIE SPIE OPTO - San Francisco, California, USA (Saturday 2 February 2013)] Advances in Slow and Fast Light VI - Detecting Coriolis force via slow light

Davuluri, Sankar, Rostovtsev, Yuri V., Shahriar, Selim M., Narducci, Frank A.

Year:

2013

Language:

english

File:

PDF, 113 KB

english, 2013

75

[ACM Press the First ACM International Conference - Niagara Falls, New York (2010.08.02-2010.08.04)] Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology - BCB '10 - Data mining of mRNA-Seq and small RNA-Seq data to find microRNA targets

Kim, Hyunsoo, Davuluri, Ramana V.

Year:

2010

Language:

english

File:

PDF, 580 KB

english, 2010

76

Upregulated WAVE3 expression is essential for TGF-β-mediated EMT and metastasis of triple-negative breast cancer cells

Taylor, Molly A., Davuluri, Gangarao, Parvani, Jenny G., Schiemann, Barbara J., Wendt, Michael K., Plow, Edward F., Schiemann, William P., Sossey-Alaoui, Khalid

Journal:

Breast Cancer Research and Treatment

Year:

2013

Language:

english

File:

PDF, 1.00 MB

english, 2013

77

String cosmological models with bulk viscosity in Nordtvedt's general scalar-tensor theory of gravitation

Velagapudi, Uma Maheswara, Davuluri, Neelima

Journal:

Journal of Theoretical and Applied Physics

Year:

2013

Language:

english

File:

PDF, 212 KB

english, 2013

78

NPEBseq: nonparametric empirical bayesian-based procedure for differential expression analysis of RNA-seq data

Bi, Yingtao, Davuluri, Ramana V

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 464 KB

english, 2013

79

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline

Stong, N., Deng, Z., Gupta, R., Hu, S., Paul, S., Weiner, A. K., Eichler, E. E., Graves, T., Fronick, C. C., Courtney, L., Wilson, R. K., Lieberman, P. M., Davuluri, R. V., Riethman, H.

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.09 MB

english, 2014

80

miR-218 opposes a critical RTK-HIF pathway in mesenchymal glioblastoma

Mathew, L. K., Skuli, N., Mucaj, V., Lee, S. S., Zinn, P. O., Sathyan, P., Imtiyaz, H. Z., Zhang, Z., Davuluri, R. V., Rao, S., Venneti, S., Lal, P., Lathia, J. D., Rich, J. N., Keith, B., Minn, A. J.

Journal:

Proceedings of the National Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 1.31 MB

english, 2014

81

Sa1005 Extra Hepatic Findings in the Cross Sectional Imaging of Hepatocellular Carcinoma Screening

Garlapati, Vivek Reddy, Sagar, Dipti, Davuluri, Surya, Kalia, Harmit, Massoum, Hatef

Journal:

Gastroenterology

Year:

2014

Language:

english

File:

PDF, 217 KB

english, 2014

82

Aberrant Transforming Growth Factor β1 Signaling and SMAD4 Nuclear Translocation Confer Epigenetic Repression of ADAM19 in Ovarian Cancer

Chan, Michael W.Y., Huang, Yi-Wen, Hartman-Frey, Corinna, Kuo, Chieh-Ti, Deatherage, Daniel, Qin, Huaxia, Cheng, Alfred S.L., Yan, Pearlly S., Davuluri, Ramana V., Huang, Tim H.-M., Nephew, Kenneth P.

Journal:

Year:

2008

Language:

english

File:

PDF, 954 KB

english, 2008

83

Minimizing Warfarin Associated Adverse Events in Hospitalized Adults: Education with Daily Reinforcement is Effective

Dharmarajan, T.S., Dharmarajan, T.S., Aksoy, T., Davuluri, S., Bangar, M., Goel, G., Sivaraju, P., Norkus, Edward P.

Journal:

Journal of the American Medical Directors Association

Year:

2011

Language:

english

File:

PDF, 42 KB

english, 2011

84

On the significance of adenylic acid aminohydrolase in skeletal muscle of vertebrates

Davuluri, Siva Prasad, Hird, F.J.R., Stanley, I.J.

Journal:

Comparative Biochemistry and Physiology Part B: Comparative Biochemistry

Year:

1981

Language:

english

File:

PDF, 604 KB

english, 1981

85

A re-appraisal of the function and synthesis of phosphoarginine and phosphocreatine in muscle

Davuluri, Siva Prasad, Hird, F.J.R., McLean, R.M.

Journal:

Comparative Biochemistry and Physiology Part B: Comparative Biochemistry

Year:

1981

Language:

english

File:

PDF, 640 KB

english, 1981

86

Quantum optical mouse to detect Coriolis force

Davuluri, Sankar, Rostovtsev, Yuri V.

Journal:

EPL (Europhysics Letters)

Year:

2013

Language:

english

File:

PDF, 197 KB

english, 2013

87

Faulty Empirical Data

Davuluri Venkateswarlu

Journal:

Social Scientist

Year:

1992

Language:

english

File:

PDF, 575 KB

english, 1992

88

Medications, Renal Function, and Kidney Injury: A Complex Interplay, Wherein Prevention Is Easier Than Cure!

Dharmarajan, T.S., Davuluri, Surya

Journal:

Journal of the American Medical Directors Association

Year:

2014

Language:

english

File:

PDF, 272 KB

english, 2014

89

Genetic Predisposition to Papillary Thyroid Carcinoma: Involvement of FOXE1 , TSHR , and a Novel lincRNA Gene, PTCSC2

He, Huiling, Li, Wei, Liyanarachchi, Sandya, Jendrzejewski, Jaroslaw, Srinivas, Mukund, Davuluri, Ramana V., Nagy, Rebecca, de la Chapelle, Albert

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2015

Language:

english

File:

PDF, 873 KB

english, 2015

90

Alternative transcription exceeds alternative splicing in generating the transcriptome diversity of cerebellar development

Pal, Sharmistha, Gupta, Ravi, Kim, Hyunsoo, Wickramasinghe, Priyankara, Baubet, Valérie, Showe, Louise C., Dahmane, Nadia, Davuluri, Ramana V.

Journal:

Genome Research

Year:

2011

Language:

english

File:

PDF, 1.50 MB

english, 2011

91

Improving the Economic Values of the Recycled Plastics Using Nanotechnology Associated Studies

Khan, W.S., Asmatulu, R., Davuluri, S., Dandin, V.K.

Journal:

Journal of Materials Science & Technology

Year:

2014

Language:

english

File:

PDF, 1.19 MB

english, 2014

92

Thermodynamic, conformational, and chemical reactivity studies of the 2,5-di-tert-butylcyclohexyl system. Reversal of the thermodynamic stability with chemical reactivity trends of cyclohexyl derivatives

Pasto, Daniel J., Rao, Davuluri Ramamohana.

Journal:

Journal of the American Chemical Society

Year:

1970

Language:

english

File:

PDF, 1.13 MB

english, 1970

93

Antibodies to Trichomonas vaginalis surface glycolipid

Bastida-Corcuera, F. D., Singh, B. N., Gray, G. C., Stamper, P. D., Davuluri, M., Schlangen, K., Corbeil, R. R., Corbeil, L. B.

Journal:

Sexually Transmitted Infections

Year:

2013

Language:

english

File:

PDF, 557 KB

english, 2013

94

[IEEE 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) - Atlanta, GA (2011.11.12-2011.11.15)] 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) - Fracture detection and quantitative measure of displacement in pelvic CT images

Jie Wu,, Yang Tang,, Davuluri, Pavani, Ward, Kevin R., Belle, Ashwin, Hobson, Rosalyn S., Cockrell, Charles H., Najarian, K.

Year:

2011

Language:

english

File:

PDF, 850 KB

english, 2011

95

Desorption from concentrated polymer solutions in good and poor solvents

Rao, Sripada P., Gandhi, Kandukuri S., Rao, Davuluri P., Singh, Rakesh P.

Journal:

Industrial & Engineering Chemistry Research

Year:

1993

Language:

english

File:

PDF, 953 KB

english, 1993

96

Polymer Films Possessing Nanoreinforcements via Organically Modified Layered Silicate

Uhl, Fawn M., Davuluri, Siva Prashanth, Wong, Shing-Chung, Webster, Dean C.

Journal:

Chemistry of Materials

Year:

2004

Language:

english

File:

PDF, 233 KB

english, 2004

97

[IEEE 2012 IEEE 36th Annual Computer Software and Applications Conference - COMPSAC 2012 - Izmir, Turkey (2012.07.16-2012.07.20)] 2012 IEEE 36th Annual Computer Software and Applications Conference - Using Semantic Web Technologies for RBAC in Project-Oriented Environments

Raje, Satyajeet, Davuluri, Chowdary, Freitas, Michael, Ramnath, Rajiv, Ramanathan, Jay

Year:

2012

Language:

english

File:

PDF, 894 KB

english, 2012

98

[IEEE 2010 IEEE International Conference on BioInformatics and BioEngineering - Philadelphia, PA, USA (2010.05.31-2010.06.3)] 2010 IEEE International Conference on BioInformatics and BioEngineering - Estimating the Expression of Transcript Isoforms from mRNA-Seq via Nonnegative Least Squares

Kim, Hyunsoo, Bi, Yingtao, Davuluri, Ramana V.

Year:

2010

Language:

english

File:

PDF, 240 KB

english, 2010

99

[IEEE 2010 International Conference on Biosciences - Cancun, Mexico (2010.03.7-2010.03.13)] 2010 International Conference on Biosciences - Performance Comparison of Volterra Predictor and Neural Network for Breathing Prediction

Davuluri, Pavani, Hobson, Rosalyn S., Murphy, Martin J., Najarian, Kayvan

Year:

2010

Language:

english

File:

PDF, 316 KB

english, 2010

100

[IEEE 2012 IEEE Electrical Design of Advanced Packaging and Systems Symposium (EDAPS) - Taipei, Taiwan (2012.12.9-2012.12.11)] 2012 IEEE Electrical Design of Advanced Packaging and Systems Symposium (EDAPS) - Cable radiation from common mode signals and differential mode signals

Chen, Chung-hao, Pazos, Javier, Davuluri, Pujitha

Year:

2012

Language:

english

File:

PDF, 1.36 MB

english, 2012

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