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1

Estimation by simulation of the efficiency of the French marker-assisted selection program in dairy cattle(Open Access publication)

François Guillaume, Sébastien Fritz, Didier Boichard, Tom Druet

Journal:

Genetics Selection Evolution

Year:

2008

Language:

english

File:

PDF, 110 KB

english, 2008

2

Genomic selection in domestic animals: Principles, applications and perspectives

Boichard, Didier, Ducrocq, Vincent, Croiseau, Pascal, Fritz, Sébastien

Journal:

Comptes Rendus Biologies

Year:

2016

Language:

english

File:

PDF, 380 KB

english, 2016

3

ÉVOLUTION DES OBJECTIFS ET DES MÉTHODES DE SÉLECTION DES BOVINS LAITIERS

VERRIER, Etienne, LE MEZEC, Pascale, BOICHARD, Didier, MATTALIA, Sophie

Journal:

Bulletin de l Académie vétérinaire de France

Year:

2010

Language:

french

File:

PDF, 338 KB

french, 2010

4

Confirmed effects of candidate variants for milk production, udder health, and udder morphology in dairy cattle

Tribout, Thierry, Croiseau, Pascal, Lefebvre, Rachel, Barbat, Anne, Boussaha, Mekki, Fritz, SÃ©bastien, Boichard, Didier, Hoze, Chris, Sanchez, Marie-Pierre

Journal:

Genetics Selection Evolution

Year:

2020

File:

PDF, 2.22 MB

2020

5

Genetics Selection Evolution: news for the period January 2009 - May 2010 and editorial announcements

Helene Hayes, Didier Boichard

Journal:

Genetics Selection Evolution

Year:

2010

Language:

english

File:

PDF, 172 KB

english, 2010

6

Alternative models for QTL detection in livestock. II. Likelihood approximations and sire marker genotype estimations

Brigitte Mangin, Bruno Goffinet, Pascale Le Roy, Didier Boichard, Jean-Michel Elsen

Journal:

Genetics Selection Evolution

Year:

1999

File:

PDF, 1.13 MB

1999

7

Alternative models for QTL detection in livestock. I. General introduction

Jean-Michel Elsen, Brigitte Mangin, Bruno Goffinet, Didier Boichard, Pascale Le Roy

Journal:

Genetics Selection Evolution

Year:

1999

File:

PDF, 1.27 MB

1999

8

Connectedness in the French Holstein cattle population

Eric Hanocq, Didier Boichard

Journal:

Genetics Selection Evolution

Year:

1999

File:

PDF, 1.57 MB

1999

9

Alternative models for QTL detection in livestock. III. Heteroskedastic model and models corresponding to several distributions of the QTL effect

Bruno Goffinet, Pascale Le Roy, Didier Boichard, Jean Michel Elsen, Brigitte Mangin

Journal:

Genetics Selection Evolution

Year:

1999

File:

PDF, 988 KB

1999

10

A new reciprocal translocation in a subfertile bull

Alain Ducos, Pascal Dumont, Anne Séguéla, Alain Pinton, Hélène Berland, Corinne Brun-Baronnat, Aafke Darré, Brigitte Marquant-Le Guienne, Patrice Humblot, Didier Boichard, Roland Darré

Journal:

Genetics Selection Evolution

Year:

2000

File:

PDF, 954 KB

2000

11

Use of maternal information for QTL detection in a (grand)daughter design

Marc Bolard, Didier Boichard

Journal:

Genetics Selection Evolution

Year:

2002

Language:

english

File:

PDF, 1023 KB

english, 2002

12

Detection of genes influencing economic traits in three French dairy cattle breeds

Didier Boichard, Cécile Grohs, Florence Bourgeois, Frédérique Cerqueira, Rémi Faugeras, André Neau, Rachel Rupp, Yves Amigues, Yvonne Marie Boscher, Hubert Levéziel

Journal:

Genetics Selection Evolution

Year:

2003

Language:

english

File:

PDF, 454 KB

english, 2003

13

A first generation bovine BAC-based physical map

Laurent Schibler, Anne Roig, Marie-Françoise Mahé, Jean-Claude Save, Mathieu Gautier, Sead Taourit, Didier Boichard, André Eggen, Edmond P Cribiu

Journal:

Genetics Selection Evolution

Year:

2004

Language:

english

File:

PDF, 396 KB

english, 2004

14

GSE is now an open access journal published by BioMed Central

Hélène Hayes, Philippe Baret, Didier Boichard

Journal:

Genetics Selection Evolution

Year:

2009

Language:

english

File:

PDF, 206 KB

english, 2009

15

Inclusion of cow records in genomic evaluations and impact on bias due to preferential treatment

Romain Dassonneville, Aurelia Baur, Sébastien Fritz, Didier Boichard, Vincent Ducrocq

Journal:

Genetics Selection Evolution

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

16

Genetics of resistance to mastitis in dairy cattle

Rupp, Rachel, Boichard, Didier

Journal:

Veterinary Research

Year:

2003

Language:

english

File:

PDF, 163 KB

english, 2003

17

QTL fine mapping with Bayes C(π): a simulation study

Irene van den Berg, Sébastien Fritz, Didier Boichard

Journal:

Genetics Selection Evolution

Year:

2013

Language:

english

File:

PDF, 339 KB

english, 2013

18

Genetics Selection Evolution reviewer acknowledgement 2013

Boichard, Didier, Dekkers, Jack CM, Hayes, Helene

Journal:

Genetics Selection Evolution

Year:

2014

Language:

english

File:

PDF, 97 KB

english, 2014

19

High-density marker imputation accuracy in sixteen French cattle breeds

Hozé, Chris, Fouilloux, Marie-Noëlle, Venot, Eric, Guillaume, François, Dassonneville, Romain, Fritz, Sébastien, Ducrocq, Vincent, Phocas, Florence, Boichard, Didier, Croiseau, Pascal

Journal:

Genetics Selection Evolution

Year:

2013

Language:

english

File:

PDF, 424 KB

english, 2013

20

Effect of Holstein Crossbreeding in the French Black and White Cattle Population

Boichard, Didier, Bonaiti, Bernard, Barbat, Anne

Journal:

Journal of Dairy Science

Year:

1993

Language:

english

File:

PDF, 532 KB

english, 1993

21

Concordance analysis for QTL detection in dairy cattle: a case study of leg morphology

van den Berg, Irene, Fritz, Sébastien, Rodriguez, Sabrina, Rocha, Dominique, Boussaha, Mekki, Lund, Mogens S, Boichard, Didier

Journal:

Genetics Selection Evolution

Year:

2014

Language:

english

File:

PDF, 939 KB

english, 2014

22

Genetic Analysis of Conception Rate in French Holstein Cattle

Boichard, Didier, Manfredi, Eduardo

Journal:

Acta Agriculturae Scandinavica, Section A - Animal Science

Year:

1994

Language:

english

File:

PDF, 773 KB

english, 1994

23

Fine tuning genomic evaluations in dairy cattle through SNP pre-selection with the Elastic-Net algorithm

CROISEAU, PASCAL, LEGARRA, ANDRÉS, GUILLAUME, FRANÇOIS, FRITZ, SÉBASTIEN, BAUR, AURÉLIA, COLOMBANI, CARINE, ROBERT-GRANIÉ, CHRISTÈLE, BOICHARD, DIDIER, DUCROCQ, VINCENT

Journal:

Genetics Research

Year:

2011

Language:

english

File:

PDF, 189 KB

english, 2011

24

Genetics Selection Evolutionreviewer acknowledgement 2014

Boichard, Didier, Dekkers, Jack, Hayes, Helene, van der Werf, Julius

Journal:

Genetics Selection Evolution

Year:

2015

Language:

english

File:

PDF, 289 KB

english, 2015

25

Genetics Selection Evolution reviewer acknowledgement 2015

Boichard, Didier, Dekkers, Jack, Hayes, Helene, van der Werf, Julius

Journal:

Genetics Selection Evolution

Year:

2016

Language:

english

File:

PDF, 697 KB

english, 2016

26

Coding and non-coding variants in HFM1, MLH3, MSH4, MSH5, RNF212 and RNF212B affect recombination rate in cattle

Kadri, Naveen Kumar, Harland, Chad, Faux, Pierre, Cambisano, Nadine, Karim, Latifa, Coppieters, Wouter, Fritz, Sébastien, Mullaart, Erik, Baurain, Denis, Boichard, Didier, Spelman, Richard, Charlier,

Journal:

Genome Research

Year:

2016

Language:

english

File:

PDF, 919 KB

english, 2016

27

Comparing power and precision of within-breed and multibreed genome-wide association studies of production traits using whole-genome sequence data for 5 French and Danish dairy cattle breeds

van den Berg, Irene, Boichard, Didier, Lund, Mogens Sandø

Journal:

Journal of Dairy Science

Year:

2016

Language:

english

File:

PDF, 1.82 MB

english, 2016

28

Population Structure Analysis of Bull Genomes of European and Western Ancestry

Chung, Neo Christopher, Szyda, Joanna, Frąszczak, Magdalena, Fries, Hans Rudolf, SandøLund, Mogens, Guldbrandtsen, Bernt, Boichard, Didier, Stothard, Paul, Veerkamp, Roel, Goddard, Michael, Van Tassel

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 770 KB

english, 2017

29

Sequence variants selected from a multi-breed GWAS can improve the reliability of genomic predictions in dairy cattle

van den Berg, Irene, Boichard, Didier, Lund, Mogens S.

Journal:

Genetics Selection Evolution

Year:

2016

Language:

english

File:

PDF, 1.97 MB

english, 2016

30

Using Sequence Variants in Linkage Disequilibrium with Causative Mutations to Improve Across-Breed Prediction in Dairy Cattle: A Simulation Study

van den Berg, Irene, Boichard, Didier, Guldbrandtsen, Bernt, Lund, Mogens S.

Journal:

G3 Genes|Genome|Genetics

Year:

2016

Language:

english

File:

PDF, 1.64 MB

english, 2016

31

Female Fertility in French Dairy Breeds: Current Situation and Strategies for Improvement

BARBAT, Anne, MÉZEC, Pascale Le, DUCROCQ, Vincent, MATTALIA, Sophie, FRITZ, Sebastien, BOICHARD, Didier, PONSART, Claire, HUMBLOT, Patrice

Journal:

Journal of Reproduction and Development

Year:

2010

Language:

english

File:

PDF, 191 KB

english, 2010

32

Genome-wide association study for milking speed in French Holstein cows

Marete, Andrew, Sahana, Goutam, Fritz, Sébastien, Lefebvre, Rachel, Barbat, Anne, Lund, Mogens Sandø, Guldbrandtsen, Bernt, Boichard, Didier

Journal:

Journal of Dairy Science

Year:

2018

Language:

english

File:

PDF, 1.18 MB

english, 2018

33

Genome-wide mapping of large deletions and their population-genetic properties in dairy cattle

Mesbah-Uddin, Md, Guldbrandtsen, Bernt, Iso-Touru, Terhi, Vilkki, Johanna, De Koning, Dirk-Jan, Boichard, Didier, Lund, Mogens Sandø, Sahana, Goutam

Journal:

Year:

2018

Language:

english

File:

PDF, 1.08 MB

english, 2018

34

A system-based analysis of the genetic determinism of udder conformation and health phenotypes across three French dairy cattle breeds

Marete, Andrew, Lund, Mogens Sandø, Boichard, Didier, Ramayo-Caldas, Yuliaxis, Loor, Juan J

Journal:

Year:

2018

Language:

english

File:

PDF, 5.21 MB

english, 2018

35

A multi-scale analysis of bull sperm methylome revealed both species peculiarities and conserved tissue-specific features

Perrier, Jean-Philippe, Sellem, Eli, Prézelin, Audrey, Gasselin, Maxime, Jouneau, Luc, Piumi, François, Al Adhami, Hala, Weber, Michaël, Fritz, Sébastien, Boichard, Didier, Le Danvic, Chrystelle, Schi

Journal:

Year:

2018

Language:

english

File:

PDF, 2.81 MB

english, 2018

36

A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations

Marete, Andrew G., Guldbrandtsen, Bernt, Lund, Mogens S., Fritz, Sébastien, Sahana, Goutam, Boichard, Didier

Journal:

Frontiers in Genetics

Year:

2018

Language:

english

File:

PDF, 1.05 MB

english, 2018

37

QUEL FUTUR POUR L’AMÉLIORATION GÉNÉTIQUE CHEZ LES ESPÈCES DOMESTIQUES ?

BOICHARD, Didier

Journal:

Bulletin de l Académie vétérinaire de France

Year:

2014

Language:

french

File:

PDF, 220 KB

french, 2014

38

Improvement of genomic prediction by integrating additional single nucleotide polymorphisms selected from imputed whole genome sequencing data

Liu, Aoxing, Lund, Mogens Sandø, Boichard, Didier, Karaman, Emre, Fritz, Sebastien, Aamand, Gert Pedersen, Nielsen, Ulrik Sander, Wang, Yachun, Su, Guosheng

Journal:

Year:

2019

Language:

english

File:

PDF, 638 KB

english, 2019

39

Use of sexed semen and female genotyping affects genetic and economic outcomes of Montbéliarde dairy herds depending on the farming system considered

Bérodier, Marie, Brochard, Mickaël, Boichard, Didier, Dezetter, Charlotte, Bareille, Nathalie, Ducrocq, Vincent

Journal:

Journal of Dairy Science

Year:

2019

File:

PDF, 1.05 MB

2019

40

Longitudinal study of Mycobacterium avium ssp. paratuberculosis fecal shedding patterns and concurrent serological patterns in naturally infected dairy cattle

Navarro-Gonzalez, Nora, Fourichon, Christine, Blanquefort, Philippe, Delafosse, Arnaud, Joly, Alain, Ngwa-Mbot, David, Biet, Franck, Boichard, Didier, Schibler, Laurent, Journaux, Laurent, Meens, Eric

Journal:

Journal of Dairy Science

Year:

2019

File:

PDF, 4.22 MB

2019

41

Imputation for sequencing variants preselected to a customized low-density chip

Liu, Aoxing, Lund, Mogens SandÃ¸, Boichard, Didier, Mao, Xiaowei, Karaman, Emre, Fritz, Sebastien, Aamand, Gert Pedersen, Wang, Yachun, Su, Guosheng

Journal:

Scientific Reports

Year:

2020

File:

PDF, 1.26 MB

2020

42

Joint imputation of whole-genome sequence variants and large chromosomal deletions in cattle

Mesbah-Uddin, Md, Guldbrandtsen, Bernt, Lund, Mogens SandÃ¸, Boichard, Didier, Sahana, Goutam

Journal:

Journal of Dairy Science

Year:

2019

File:

PDF, 3.04 MB

2019

43

Meta-analysis for milk fat and protein percentage using imputed sequence variant genotypes in 94,321 cattle from eight cattle breeds

van den Berg, Irene, Xiang, Ruidong, Jenko, Janez, Pausch, Hubert, Boussaha, Mekki, Schrooten, Chris, Tribout, Thierry, Gjuvsland, Arne B., Boichard, Didier, NordbÃ¸, Ãyvind, Sanchez, Marie-Pierre, G

Journal:

Genetics Selection Evolution

Year:

2020

File:

PDF, 1.77 MB

2020

44

Genetic architecture of individual variation in recombination rate on the X chromosome in cattle

Zhang, Junjie, Kadri, Naveen Kumar, Mullaart, Erik, Spelman, Richard, Fritz, SÃ©bastien, Boichard, Didier, Charlier, Carole, Georges, Michel, Druet, Tom

Journal:

Year:

2020

File:

PDF, 1.53 MB

2020

45

Weighted single-step genomic best linear unbiased prediction integrating variants selected from sequencing data by association and bioinformatics analyses

Liu, Aoxing, Lund, Mogens SandÃ¸, Boichard, Didier, Karaman, Emre, Guldbrandtsen, Bernt, Fritz, Sebastien, Aamand, Gert Pedersen, Nielsen, Ulrik Sander, Sahana, Goutam, Wang, Yachun, Su, Guosheng

Journal:

Genetics Selection Evolution

Year:

2020

File:

PDF, 1.38 MB

2020

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