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1

Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri

Kitaoku, Yoshihito, Nishimura, Shigenori, Hirono, Takeru, Suginta, Wipa, Ohnuma, Takayuki, Fukamizo, Tamo

Journal:

Year:

2019

Language:

english

File:

PDF, 2.14 MB

english, 2019

2

[Advances in Experimental Medicine and Biology] Targeting Chitin-containing Organisms Volume 1142 || Chitin Synthesis and Degradation in Fungi: Biology and Enzymes

Yang, Qing, Fukamizo, Tamo

Year:

2019

Language:

english

File:

PDF, 443 KB

english, 2019

3

Antimicrobial peptides derived from goose egg white lysozyme

Sompong Thammasirirak, Yuwatida Pukcothanung, Sutthidech Preecharram, Sakda Daduang, Rina Patramanon, Tamo Fukamizo, Tomohiro Araki

Journal:

Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology

Year:

2010

Language:

english

File:

PDF, 999 KB

english, 2010

4

Mechanism of chitin hydrolysis by the binary chitinase system in insect moulting fluid

Tamo Fukamizo, Karl J. Kramer

Journal:

Insect Biochemistry

Year:

1985

Language:

english

File:

PDF, 469 KB

english, 1985

5

Hen-Egg-White Lysozyme Modified with Histamine : State of the Imidazolylethyl Group Covalently Attached to the Binding Site and Its Effect on the Sugar-Binding Ability

Tamo Fukamizo, Tomohisa Hatta, Sachio Goto

Journal:

Year:

1995

Language:

english

File:

PDF, 861 KB

english, 1995

6

Chitosanase from Streptomyces sp. strain N174: a comparative review of its structure and function

Fukamizo, Tamo, Brzezinski, Ryszard

Journal:

Biochemistry and Cell Biology

Year:

1997

File:

PDF, 1.81 MB

1997

7

Crystal structure and thermodynamic dissection of chitin oligosaccharide binding to the LysM module of chitinase-A from Pteris ryukyuensis

Ohnuma, Takayuki, Taira, Toki, Umemoto, Naoyuki, Kitaoku, Yoshihito, Sørlie, Morten, Numata, Tomoyuki, Fukamizo, Tamo

Journal:

Biochemical and Biophysical Research Communications

Year:

2017

Language:

english

File:

PDF, 1.07 MB

english, 2017

8

Periplasmic solute-binding proteins: Structure classification and chitooligosaccharide recognition

Fukamizo, Tamo, Kitaoku, Yoshihito, Suginta, Wipa

Journal:

International Journal of Biological Macromolecules

Year:

2019

Language:

english

File:

PDF, 3.31 MB

english, 2019

9

[Advances in Experimental Medicine and Biology] Targeting Chitin-containing Organisms Volume 1142 || Nematode Chitin and Application

Yang, Qing, Fukamizo, Tamo

Year:

2019

Language:

english

File:

PDF, 200 KB

english, 2019

10

Binding mode of N,N′,N″, N′″-tetraacetylchitotetraitol to hen egg white lysozyme

Tamo Fukamizo, Takeshi Ohkawa, Yasuo Ikeda, Takao Torikata, Sachio Goto

Journal:

Carbohydrate Research

Year:

1995

Language:

english

File:

PDF, 395 KB

english, 1995

11

A flexible loop controlling the enzymatic activity and specificity in a glycosyl hydrolase family 19 endochitinase from barley seeds (Hordeum vulgare L.)

Tamo Fukamizo, Ryoh Miyake, Atsushi Tamura, Takayuki Ohnuma, Karen Skriver, Niko V. Pursiainen, André H. Juffer

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2009

Language:

english

File:

PDF, 790 KB

english, 2009

12

Transglycosylation reaction catalyzed by a class V chitinase from cycad, Cycas revoluta: A study involving site-directed mutagenesis, HPLC, and real-time ESI-MS

Toki Taira, Maho Fujiwara, Nicole Dennhart, Hiroko Hayashi, Shoko Onaga, Takayuki Ohnuma, Thomas Letzel, Shohei Sakuda, Tamo Fukamizo

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2010

Language:

english

File:

PDF, 1.39 MB

english, 2010

13

Chitinase-catalyzed hydrolysis of 4-nitrophenyl penta-N-acetyl-β-chitopentaoside as determined by real-time ESIMS: The 4-nitrophenyl moiety of the substrate interacts with the enzyme binding site

Thomas Letzel, Ellen Sahmel-Schneider, Karen Skriver, Takayuki Ohnuma, Tamo Fukamizo

Journal:

Carbohydrate Research

Year:

2011

Language:

english

File:

PDF, 694 KB

english, 2011

14

26 kDa endochitinase from barley seeds: Real-time monitoring of the enzymatic reaction and substrate binding experiments using electrospray ionization mass spectrometry

Nicole Dennhart, Linda M.M. Weigang, Maho Fujiwara, Tamo Fukamizo, Karen Skriver, Thomas Letzel

Journal:

Journal of Biotechnology

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

15

A novel type of family 19 chitinase from Aeromonas sp. No.10S-24 : Cloning, sequence, expression, and the enzymatic properties

Mitsuhiro Ueda, Miki Kojima, Tomoye Yoshikawa, Norio Mitsuda, Keiichi Araki, Takashi Kawaguchi, Kazutaka Miyatake, Motoo Arai, Tamo Fukamizo

Journal:

Year:

2003

Language:

english

File:

PDF, 944 KB

english, 2003

16

Novelβ-N-acetylglucosaminidases fromVibrio harveyi 650: Cloning, expression, enzymatic properties, and subsite identification

Wipa Suginta, Duangkamon Chuenark, Mamiko Mizuhara, Tamo Fukamizo

Journal:

BMC Biochemistry

Year:

2010

Language:

english

File:

PDF, 4.37 MB

english, 2010

17

A class V chitinase fromArabidopsis thaliana: gene responses, enzymatic properties, and crystallographic analysis

Takayuki Ohnuma, Tomoyuki Numata, Takuo Osawa, Mamiko Mizuhara, Outi Lampela, André H. Juffer, Karen Skriver, Tamo Fukamizo

Journal:

Year:

2011

Language:

english

File:

PDF, 874 KB

english, 2011

18

Crystal structure and mode of action of a class V chitinase fromNicotiana tabacum

Takayuki Ohnuma, Tomoyuki Numata, Takuo Osawa, Mamiko Mizuhara, Kjell M. Vårum, Tamo Fukamizo

Journal:

Plant Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.22 MB

english, 2011

19

Accessory active site residues of Streptomyces sp. N174 chitosanase : Variations on a common theme in the lysozyme superfamily

Marie-Ève Lacombe-Harvey, Tamo Fukamizo, Julie Gagnon, Mariana G. Ghinet, Nicole Dennhart, Thomas Letzel, Ryszard Brzezinski

Journal:

Year:

2009

Language:

english

File:

PDF, 715 KB

english, 2009

20

Chitin oligosaccharide binding to a family GH19 chitinase from the moss Bryum coronatum

Takayuki Ohnuma, Morten Sørlie, Tatsuya Fukuda, Noriko Kawamoto, Toki Taira, Tamo Fukamizo

Journal:

Year:

2011

Language:

english

File:

PDF, 761 KB

english, 2011

21

The Calvin cycle in cyanobacteria is regulated by CP12 via the NAD(H)/NADP(H) ratio under light/dark conditions

Masahiro Tamoi, Takashi Miyazaki, Tamo Fukamizo, Shigeru Shigeoka

Journal:

The Plant Journal

Year:

2005

Language:

english

File:

PDF, 270 KB

english, 2005

22

Isolation and characterisation of crocosin, an antibacterial compound from crocodile (Crocodylus siamensis) plasma

Sutthidech PREECHARRAM, Pornpimol JEARRANAIPREPAME, Sakda DADUANG, Yosapong TEMSIRIPONG, Theerasak SOMDEE, Tamo FUKAMIZO, Jisnuson SVASTI, Tomohiro ARAKI, Sompong THAMMASIRIRAK

Journal:

Animal Science Journal

Year:

2010

Language:

english

File:

PDF, 853 KB

english, 2010

23

Mechanism of chitin oligosaccharide hydrolysis by the binary enzyme chitinase system in insect moulting fluid

Tamo Fukamizo, Karl J. Kramer

Journal:

Insect Biochemistry

Year:

1985

Language:

english

File:

PDF, 505 KB

english, 1985

24

Effect of 20-hydroxyecdysone on chitinase and β-N-acetylglucosaminidase during the larval-pupal transformation of Manduca sexta (L.)

Tamo Fukamizo, Karl J. Kramer

Journal:

Insect Biochemistry

Year:

1987

Language:

english

File:

PDF, 405 KB

english, 1987

25

Specificity of chitosanase from Bacillus pumilus

Tamo Fukamizo, Takeshi Ohkawa, Yasuo Ikeda, Sachio Goto

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1994

Language:

english

File:

PDF, 514 KB

english, 1994

26

Substrate binding subsites of chitinase from barley seeds and lysozyme from goose egg white

Yuji Honda, Tamo Fukamizo

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1998

Language:

english

File:

PDF, 404 KB

english, 1998

27

Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization

Yuji Honda, Tamo Fukamizo, Toshihide Okajima, Sachio Goto, Isabelle Boucher, Ryszard Brzezinski

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1999

Language:

english

File:

PDF, 444 KB

english, 1999

28

Site-directed mutagenesis of Asp280 suggests substrate-assisted catalysis of chitinase A1 from Bacillus circulans WL-12

Masayuki Hashimoto, Yuji Honda, Naoki Nikaidou, Tamo Fukamizo, Takeshi Watanabe

Journal:

Journal of Bioscience and Bioengineering

Year:

2000

Language:

english

File:

PDF, 393 KB

english, 2000

29

The role of binding subsite A in reactions catalyzed by hen egg-white lysozyme

Tamo FUKAMIZO, Katsuya HAYASHI, Sachio GOTO

Journal:

Year:

1986

Language:

english

File:

PDF, 440 KB

english, 1986

30

1H-NMR study on the chitotrisaccharide binding to hen egg white lysozyme

Tamo FUKAMIZO, Yasuo IKEDA, Takeshi OHKAWA, Sachio GOTO

Journal:

Year:

1992

Language:

english

File:

PDF, 689 KB

english, 1992

31

Crystal structure and chitin oligosaccharide-binding mode of a ‘loopful’ family GH19 chitinase from rye, Secale cereale, seeds

Takayuki Ohnuma, Tomoyuki Numata, Takuo Osawa, Hideko Inanaga, Yoko Okazaki, Shoko Shinya, Kaori Kondo, Tatsuya Fukuda, Tamo Fukamizo

Journal:

Year:

2012

Language:

english

File:

PDF, 862 KB

english, 2012

32

Kinetic Analysis of Barley Chitinase

Thomas Hollis, Yuji Honda, Tamo Fukamizo, Edward Marcotte, Philip J. Day, Jon D. Robertus

Journal:

Archives of Biochemistry and Biophysics

Year:

1997

Language:

english

File:

PDF, 170 KB

english, 1997

33

Analysis of chitin structure by nuclear magnetic resonance spectroscopy and chitinolytic enzyme digestion

Tamo Fukamizo, Karl J. Kramer, Delbert D. Mueller, Jacob Schaefer, Joel Garbow, Gary S. Jacob

Journal:

Archives of Biochemistry and Biophysics

Year:

1986

Language:

english

File:

PDF, 1012 KB

english, 1986

34

Substrate size dependence of lysozyme-catalyzed reaction

Tamo Fukamizo, Takeya Minematsu, Yugi Yanase, Katsuya Hayashi, Sachio Goto

Journal:

Archives of Biochemistry and Biophysics

Year:

1986

Language:

english

File:

PDF, 826 KB

english, 1986

35

Retention of anomeric form in lysozyme-catalyzed reaction

Yuji Yanase, Tamo Fukamizo, Katsuya Hayashi, Sachio Goto

Journal:

Archives of Biochemistry and Biophysics

Year:

1987

Language:

english

File:

PDF, 676 KB

english, 1987

36

Enzymatic hydrolysis of 1,3-1,4-β-glucosyl oligosaccharides by 1,3-1,4-β-glucanase from Synechocystis PCC6803: A comparison with assays using polymer and chromophoric oligosaccharide substrates

Tamo Fukamizo, Kanako Hayashi, Masahiro Tamoi, Yusuke Fujimura, Hideki Kurotaki, Anna Kulminskaya, Motomitsu Kitaoka

Journal:

Archives of Biochemistry and Biophysics

Year:

2008

Language:

english

File:

PDF, 310 KB

english, 2008

37

Role of acidic amino acid residues in chitooligosaccharide-binding to Streptomyces sp. N174 chitosanase

Tomomi Katsumi, Marie-Ève Lacombe-Harvey, Hugo Tremblay, Ryszard Brzezinski, Tamo Fukamizo

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 354 KB

english, 2005

38

Kinetic analysis of the reaction catalyzed by chitinase A1 from Bacillus circulans WL-12 toward the novel substrates, partially N-deacetylated 4-methylumbelliferyl chitobiosides

Yuji Honda, Shinji Tanimori, Mitsunori Kirihata, Satoshi Kaneko, Ken Tokuyasu, Masayuki Hashimoto, Takeshi Watanabe, Tamo Fukamizo

Journal:

Year:

2000

Language:

english

File:

PDF, 150 KB

english, 2000

39

Substrate binding to the inactive mutants of Streptomyces sp. N174 chitosanase: indirect evaluation from the thermal unfolding experiments

Yuji Honda, Tamo Fukamizo, Isabelle Boucher, Ryszard Brzezinski

Journal:

Year:

1997

Language:

english

File:

PDF, 788 KB

english, 1997

40

Properties of Manduca sexta chitinase and its C-terminal deletions

Xiahui Zhu, Hong Zhang, Tamo Fukamizo, S Muthukrishnan, Karl J. Kramer

Journal:

Insect Biochemistry and Molecular Biology

Year:

2001

Language:

english

File:

PDF, 474 KB

english, 2001

41

Site-directed mutagenesis and functional analysis of an active site tryptophan of insect chitinase

Hong Zhang, Xin Huang, Tamo Fukamizo, Subbaratnam Muthukrishnan, Karl J Kramer

Journal:

Insect Biochemistry and Molecular Biology

Year:

2002

Language:

english

File:

PDF, 243 KB

english, 2002

42

Oligosaccharide hydrolysis by chitosanase enzymes monitored by real-time electrospray ionization–mass spectrometry

Nicole Dennhart, Tamo Fukamizo, Ryszard Brzezinski, Marie-Ève Lacombe-Harvey, Thomas Letzel

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 796 KB

english, 2008

43

Molecular Characterization of the Essential Response Regulator Protein YycF in Bacillus subtilis

Watanabe, Takafumi, Hashimoto, Yoshiki, Umemoto, Yoshihito, Tatebe, Daisuke, Furuta, Eiji, Fukamizo, Tamo, Yamamoto, Kaneyoshi, Utsumi, Ryutaro

Journal:

Journal of Molecular Microbiology and Biotechnology

Year:

2003

Language:

english

File:

PDF, 175 KB

english, 2003

44

Production of chitooligosaccharides from Rhizopus oligosporus NRRL2710 cells by chitosanase digestion

Mahata, Maria, Shinya, Shoko, Masaki, Eiko, Yamamoto, Takashi, Ohnuma, Takayuki, Brzezinski, Ryszard, Mazumder, Tapan K., Yamashita, Kazuhiko, Narihiro, Kazue, Fukamizo, Tamo

Journal:

Carbohydrate Research

Year:

2014

Language:

english

File:

PDF, 1.24 MB

english, 2014

45

A highly conserved arginine residue of the chitosanase fromStreptomycessp. N174 is involved both in catalysis and substrate binding

Lacombe-Harvey, Marie-Ève, Fortin, Mélanie, Ohnuma, Takayuki, Fukamizo, Tamo, Letzel, Thomas, Brzezinski, Ryszard

Journal:

BMC Biochemistry

Year:

2013

Language:

english

File:

PDF, 760 KB

english, 2013

46

Crystal structure of a “loopless” GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center

Ohnuma, Takayuki, Umemoto, Naoyuki, Nagata, Takuya, Shinya, Shoko, Numata, Tomoyuki, Taira, Toki, Fukamizo, Tamo

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2014

Language:

english

File:

PDF, 1.64 MB

english, 2014

47

Complete subsite mapping of a “loopful” GH19 chitinase from rye seeds based on its crystal structure

Ohnuma, Takayuki, Umemoto, Naoyuki, Kondo, Kaori, Numata, Tomoyuki, Fukamizo, Tamo

Journal:

Year:

2013

Language:

english

File:

PDF, 2.98 MB

english, 2013

48

Comparative biochemistry of mycophagous and non-mycophagous grain beetles. Chitinolytic activities of foreign and sawtoothed grain beetles

Fukamizo, Tamo, Speirs, Roy D., Kramer, Karl J.

Journal:

Comparative Biochemistry and Physiology Part B: Comparative Biochemistry

Year:

1985

Language:

english

File:

PDF, 242 KB

english, 1985

49

A glycosynthase derived from an inverting GH19 chitinase from the moss Bryum coronatum

Ohnuma, Takayuki, Fukuda, Tatsuya, Dozen, Satoshi, Honda, Yuji, Kitaoka, Motomitsu, Fukamizo, Tamo

Journal:

Biochemical Journal

Year:

2012

Language:

english

File:

PDF, 661 KB

english, 2012

50

Mutation strategies for obtaining chitooligosaccharides with longer chains by transglycosylation reaction of family GH18 chitinase

Sirimontree, Paknisa, Suginta, Wipa, Sritho, Natchanok, Kanda, Yuka, Shinya, Shoko, Ohnuma, Takayuki, Fukamizo, Tamo

Journal:

Bioscience Biotechnology and Biochemistry

Year:

2014

Language:

english

File:

PDF, 658 KB

english, 2014