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51

Kinetic mechanisms for overexpression insensitivity and oncogene cooperation

Stefan Legewie, Christine Sers, Hanspeter Herzel

Journal:

Year:

2009

Language:

english

File:

PDF, 340 KB

english, 2009

52

Identification of distinct antibody epitopes and mimotopes from a peptide array of 5520 randomly generated sequences

Ulrich Reineke, Claudia Ivascu, Marén Schlief, Christiane Landgraf, Seike Gericke, Grit Zahn, Hanspeter Herzel, Rudolf Volkmer-Engert, Jens Schneider-Mergener

Journal:

Journal of Immunological Methods

Year:

2002

Language:

english

File:

PDF, 988 KB

english, 2002

53

Measuring similarities between transcription factor binding sites

Szymon M Kielbasa, Didier Gonze, Hanspeter Herzel

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 419 KB

english, 2005

54

[AIP Chaotic, fractal, and nonlinear signal processing - Mystic, Connecticut (USA) (10−14 Jul 1995)] AIP Conference Proceedings - Biphonation in voice signals

Herzel, Hanspeter, Reuter, Robert

Year:

1996

Language:

english

File:

PDF, 1.72 MB

english, 1996

55

SPOTTED HYAENA WHOOPS: FREQUENT INCIDENCE OF VOCAL INSTABILITIES IN A MAMMALIAN LOUD CALL

EAST, MARION L., PETERS, GUSTAV, HERZEL, HANSPETER, HENSCHEL, JOHANNES R., MILLS, M. GUS L., WILHELM, KERSTIN, HOFER, HERIBERT

Journal:

Year:

2004

Language:

english

File:

PDF, 653 KB

english, 2004

56

Periodicities of 10–11 bp as Indicators of the Supercoiled State of Genomic DNA

Patrick Schieg, Hanspeter Herzel

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 393 KB

english, 2004

57

Nonlinear phenomena in contemporary vocal music

Jürgen Neubauer, Michael Edgerton, Hanspeter Herzel

Journal:

Journal of Voice

Year:

2004

Language:

english

File:

PDF, 543 KB

english, 2004

58

Competing Docking Interactions can Bring About Bistability in the MAPK Cascade

Legewie, Stefan, Schoeberl, Birgit, Blüthgen, Nils, Herzel, Hanspeter

Journal:

Biophysical Journal

Year:

2007

Language:

english

File:

PDF, 428 KB

english, 2007

59

Small RNAs Establish Delays and Temporal Thresholds in Gene Expression

Legewie, Stefan, Dienst, Dennis, Wilde, Annegret, Herzel, Hanspeter, Axmann, Ilka M.

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 267 KB

english, 2008

60

[Modeling and Simulation in Science, Engineering and Technology] Mathematical Modeling of Biological Systems || Predicting Gene Expression from Combined Expression and Promoter Profile Similarity with Application to Missing Value Imputation

Deutsch, Andreas, Brusch, Lutz, Byrne, Helen, Vries, Gerda de, Herzel, Hanspeter

Year:

2007

Language:

english

File:

PDF, 207 KB

english, 2007

61

Mathematical models in mammalian cell biology

Hanspeter Herzel, Nils Blüthgen

Journal:

Year:

2008

Language:

english

File:

PDF, 49 KB

english, 2008

62

Identification of cyanobacterial non-coding RNAs by comparative genome analysis

Ilka M Axmann, Philip Kensche, Jörg Vogel, Stefan Kohl, Hanspeter Herzel…

Journal:

Year:

2005

Language:

english

File:

PDF, 1.35 MB

english, 2005

63

Chaos, noise, and synchronization reconsidered

Herzel, Hanspeter, Freund, Jan

Journal:

Physical Review E

Year:

1995

Language:

english

File:

PDF, 233 KB

english, 1995

64

Statistical analysis of the DNA sequence of human chromosome 22

Holste, Dirk, Grosse, Ivo, Herzel, Hanspeter

Journal:

Physical Review E

Year:

2001

Language:

english

File:

PDF, 428 KB

english, 2001

65

Mechanism for 12 Hr Rhythm Generation by the Circadian Clock

Westermark, Pål O., Herzel, Hanspeter

Journal:

Year:

2013

Language:

english

File:

PDF, 1.34 MB

english, 2013

66

editorial board

Gottstein, Willi, Müller, Stefan, Herzel, Hanspeter, Steuer, Ralf

Journal:

Year:

2006

Language:

french

File:

PDF, 36 KB

french, 2006

67

Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution

Gottstein, Willi, Müller, Stefan, Herzel, Hanspeter, Steuer, Ralf

Journal:

Year:

2014

Language:

english

File:

PDF, 2.22 MB

english, 2014

68

Genome Informatics Series [Imperial College Press Genome Informatics 2009 - 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) - Boston University, Boston, USA (2009.07.27-2009.07.29)] Genome Informatics 2009 - Proceedings of the 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) - PREDICTION OF REGULATORY TRANSCRIPTION FACTORS IN T HELPER CELL DIFFERENTIATION AND MAINTENANCE

LEE, YUE-HIEN, BENARY, MANUELA, BAUMGRASS, RIA, HERZEL, HANSPETER

Year:

2010

Language:

english

File:

PDF, 1.69 MB

english, 2010

69

Gating Characteristics Control Glutamate Receptor Distribution and Trafficking In Vivo

Petzoldt, Astrid G., Lee, Yü-Hien, Khorramshahi, Omid, Reynolds, Eric, Plested, Andrew J.R., Herzel, Hanspeter, Sigrist, Stephan J.

Journal:

Current Biology

Year:

2014

Language:

english

File:

PDF, 1.56 MB

english, 2014

70

Sequence-related human proteins cluster by degree of evolutionary conservation

Mrowka, Ralf, Patzak, Andreas, Herzel, Hanspeter, Holste, Dirk

Journal:

Physical Review E

Year:

2004

Language:

english

File:

PDF, 62 KB

english, 2004

71

Repeats and correlations in human DNA sequences

Holste, Dirk, Grosse, Ivo, Beirer, Stephan, Schieg, Patrick, Herzel, Hanspeter

Journal:

Physical Review E

Year:

2003

Language:

english

File:

PDF, 424 KB

english, 2003

72

[Modeling and Simulation in Science, Engineering and Technology] Mathematical Modeling of Biological Systems || Multiparticle Direct Simulation of Photosynthetic Electron Transport Processes

Deutsch, Andreas, Brusch, Lutz, Byrne, Helen, Vries, Gerda de, Herzel, Hanspeter

Year:

2007

Language:

english

File:

PDF, 447 KB

english, 2007

73

Reverse engineering a hierarchical regulatory network downstream of oncogenic KRAS

Stelniec-Klotz, Iwona, Legewie, Stefan, Tchernitsa, Oleg, Witzel, Franziska, Klinger, Bertram, Sers, Christine, Herzel, Hanspeter, Blüthgen, Nils, Schäfer, Reinhold

Journal:

Molecular Systems Biology

Year:

2012

Language:

english

File:

PDF, 489 KB

english, 2012

74

Detecting synchronizations in an asymmetric vocal fold model from time series data

Tokuda, Isao, Herzel, Hanspeter

Journal:

Chaos An Interdisciplinary Journal of Nonlinear Science

Year:

2005

Language:

english

File:

PDF, 558 KB

english, 2005

75

Extracting information from cDNA arrays

Herzel, Hanspeter, Beule, Dieter, Kielbasa, Szymon, Korbel, Jan, Sers, Christine, Malik, Arif, Eickhoff, Holger, Lehrach, Hans, Schuchhardt, Johannes

Journal:

Chaos An Interdisciplinary Journal of Nonlinear Science

Year:

2001

Language:

english

File:

PDF, 671 KB

english, 2001

76

Sequence Periodicity in Complete Genomes of Archaea Suggests Positive Supercoiling

Herzel, Hanspeter, Weiss, Olaf, Trifonov, Edward N.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1998

Language:

english

File:

PDF, 388 KB

english, 1998

77

Entropies of biosequences: The role of repeats

Herzel, Hanspeter, Ebeling, Werner, Schmitt, Armin O.

Journal:

Physical Review E

Year:

1994

File:

PDF, 1.69 MB

1994

78

Species independence of mutual information in coding and noncoding DNA

Grosse, Ivo, Herzel, Hanspeter, Buldyrev, Sergey V., Stanley, H. Eugene

Journal:

Physical Review E

Year:

2000

Language:

english

File:

PDF, 101 KB

english, 2000

79

Correlations in DNA sequences: The role of protein coding segments

Herzel, Hanspeter, Große, Ivo

Journal:

Physical Review E

Year:

1997

Language:

english

File:

PDF, 199 KB

english, 1997

80

Nonlinear dynamics of the voice: Signal analysis and biomechanical modeling

Herzel, Hanspeter, Berry, David, Titze, Ingo, Steinecke, Ina

Journal:

Chaos An Interdisciplinary Journal of Nonlinear Science

Year:

1995

Language:

english

File:

PDF, 515 KB

english, 1995

81

SIMULATIONS OF VOCAL FOLDS WITH AN ANALOG CIRCUIT

REUTER, ROBERT, ORGLMEISTER, REINHOLD, HERZEL, HANSPETER

Journal:

International Journal of Bifurcation and Chaos

Year:

1999

Language:

english

File:

PDF, 698 KB

english, 1999

82

Timing of circadian genes in mammalian tissues

Korenčič, Anja, Košir, Rok, Bordyugov, Grigory, Lehmann, Robert, Rozman, Damjana, Herzel, Hanspeter

Journal:

Scientific Reports

Year:

2014

Language:

english

File:

PDF, 1.03 MB

english, 2014

83

Whistle Register and Biphonation in a Child’s Voice

Herzel, Hanspeter, Reuter, Robert

Journal:

Folia Phoniatrica et Logopaedica

Year:

1997

File:

PDF, 1.28 MB

1997

84

Robustness: A Key to Evolutionary Design

Hammerstein, Peter, Hagen, Edward H., Herz, Andreas V. M., Herzel, Hanspeter

Journal:

Biological Theory

Year:

2006

Language:

english

File:

PDF, 90 KB

english, 2006

85

Functioning and robustness of a bacterial circadian clock

Clodong, Sébastien, Dühring, Ulf, Kronk, Luiza, Wilde, Annegret, Axmann, Ilka, Herzel, Hanspeter, Kollmann, Markus

Journal:

Molecular Systems Biology

Year:

2007

Language:

english

File:

PDF, 566 KB

english, 2007

86

How to Quantify 'Small-World Networks'?

Herzel, Hanspeter

Journal:

Year:

1998

Language:

english

File:

PDF, 246 KB

english, 1998

87

Quantification of Circadian Rhythms in Single Cells

Westermark, Pål O., Welsh, David K., Okamura, Hitoshi, Herzel, Hanspeter, Jensen, Lars Juhl

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 522 KB

english, 2009

88

Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction

Legewie, Stefan, Blüthgen, Nils, Schäfer, Reinhold, Herzel, Hanspeter

Journal:

PLoS Computational Biology

Year:

2005

Language:

english

File:

PDF, 382 KB

english, 2005

89

Ras-Mediated Deregulation of the Circadian Clock in Cancer

Relógio, Angela, Thomas, Philippe, Medina-Pérez, Paula, Reischl, Silke, Bervoets, Sander, Gloc, Ewa, Riemer, Pamela, Mang-Fatehi, Shila, Maier, Bert, Schäfer, Reinhold, Leser, Ulf, Herzel, Hanspeter,

Journal:

Year:

2014

Language:

english

File:

PDF, 1.82 MB

english, 2014

90

Tumor Growth Rate Determines the Timing of Optimal Chronomodulated Treatment Schedules

Bernard, Samuel, Čajavec Bernard, Branka, Lévi, Francis, Herzel, Hanspeter, Ouzounis, Christos A.

Journal:

PLoS Computational Biology

Year:

2010

Language:

english

File:

PDF, 622 KB

english, 2010

91

Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops

Relógio, Angela, Westermark, Pal O., Wallach, Thomas, Schellenberg, Katja, Kramer, Achim, Herzel, Hanspeter, Jensen, Lars Juhl

Journal:

PLoS Computational Biology

Year:

2011

Language:

english

File:

PDF, 1.60 MB

english, 2011

92

Timing of Neuropeptide Coupling Determines Synchrony and Entrainment in the Mammalian Circadian Clock

Ananthasubramaniam, Bharath, Herzog, Erik D., Herzel, Hanspeter, Sporns, Olaf

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 761 KB

english, 2014

93

A Cervid Vocal Fold Model Suggests Greater Glottal Efficiency in Calling at High Frequencies

Titze, Ingo R., Riede, Tobias, Herzel, Hanspeter

Journal:

PLoS Computational Biology

Year:

2010

Language:

english

File:

PDF, 2.53 MB

english, 2010

94

Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability

Legewie, Stefan, Blüthgen, Nils, Herzel, Hanspeter

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 1.80 MB

english, 2006

95

Tuning the phase of circadian entrainment

Bordyugov, Grigory, Abraham, Ute, Granada, Adrian, Rose, Pia, Imkeller, Katharina, Kramer, Achim, Herzel, Hanspeter

Journal:

Journal of The Royal Society Interface

Year:

2015

Language:

english

File:

PDF, 1.01 MB

english, 2015

96

Genome Informatics Series [Imperial College Press Genome Informatics 2007 - 7th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2007) - Institute for Medical Science, University of Tokyo, Japan (2007.07.31-2007.08.02)] Genome Informatics 2007 - Proceedings of the 7th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2007) - PROMOTER ANALYSIS OF MAMMALIAN CLOCK CONTROLLED GENES

BOŻEK, KATARZYNA, KIEŁBASA, SZYMON M., KRAMER, ACHIM, HERZEL, HANSPETER

Year:

2007

Language:

english

File:

PDF, 684 KB

english, 2007

97

Coupling Controls the Synchrony of Clock Cells in Development and Knockouts

Tokuda, Isao T., Ono, Daisuke, Ananthasubramaniam, Bharath, Honma, Sato, Honma, Ken-Ichi, Herzel, Hanspeter

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 1.22 MB

english, 2015

98

Mining for novel candidate clock genes in the circadian regulatory network

Bhargava, Anuprabha, Herzel, Hanspeter, Ananthasubramaniam, Bharath

Journal:

BMC Systems Biology

Year:

2015

Language:

english

File:

PDF, 1.56 MB

english, 2015

99

Phasegram Analysis of Vocal Fold Vibration Documented With Laryngeal High-speed Video Endoscopy

Herbst, Christian T., Unger, Jakob, Herzel, Hanspeter, Švec, Jan G., Lohscheller, Jörg

Journal:

Journal of Voice

Year:

2016

Language:

english

File:

PDF, 3.68 MB

english, 2016

100

[IMPERIAL COLLEGE PRESS Proceedings of the 7th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2007) - Institute of Medical Science, University of Tokyo, Japan (31 July – 2 August 2007)] Genome Informatics 2007 - A MINIMAL CIRCADIAN CLOCK MODEL

AXMANN, ILKA M., LEGEWIE, STEFAN, HERZEL, HANSPETER

Language:

english

File:

PDF, 720 KB

english