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51

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

Jong Park, Kevin Karplus, Christian Barrett, Richard Hughey, David Haussler, Tim Hubbard, Cyrus Chothia

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 249 KB

english, 1998

52

Posttranscriptional Crossregulation between Drosha and DGCR8

Jinju Han, Jakob S. Pedersen, S. Chul Kwon, Cassandra D. Belair, Young-Kook Kim, Kyu-Hyeon Yeom, Woo-Young Yang, David Haussler, Robert Blelloch, V. Narry Kim

Journal:

Year:

2009

Language:

english

File:

PDF, 1.18 MB

english, 2009

53

UCSC genome browser tutorial

Ann S. Zweig, Donna Karolchik, Robert M. Kuhn, David Haussler, W. James Kent

Journal:

Year:

2008

Language:

english

File:

PDF, 1.28 MB

english, 2008

54

Quasi-Monotonic Sequences: Theory, Algorithms and Applications

Ehrenfeucht, Andrzej, Haemer, Jeffrey, Haussler, David

Journal:

SIAM Journal on Algebraic and Discrete Methods

Year:

1987

Language:

english

File:

PDF, 2.69 MB

english, 1987

55

Highly Accurate Classification of Watson-Crick Basepairs on Termini of Single DNA Molecules

Winters-Hilt, Stephen, Vercoutere, Wenonah, DeGuzman, Veronica S., Deamer, David, Akeson, Mark, Haussler, David

Journal:

Biophysical Journal

Year:

2003

Language:

english

File:

PDF, 644 KB

english, 2003

56

Vitamin D3 induced alteration of microvillar membrane lipid composition

David B.P. Goodman, Mark R. Haussler, Howard Rasmussen

Journal:

Biochemical and Biophysical Research Communications

Year:

1972

Language:

english

File:

PDF, 342 KB

english, 1972

57

The fishes of Genome 10K

Giacomo Bernardi, Edward O. Wiley, Hicham Mansour, Michael R. Miller, Guillermo Orti, David Haussler, Stephen J. O'Brien, Oliver A. Ryder, Byrappa Venkatesh

Journal:

Marine Genomics

Year:

2012

Language:

english

File:

PDF, 145 KB

english, 2012

58

Tissue sampling methods and standards for vertebrate genomics

Pamela BY Wong, Edward O Wiley, Warren E Johnson, Oliver A Ryder, Stephen J O’Brien, David Haussler, Klaus-Peter Koepfli, Marlys L Houck, Polina Perelman, Gabriela Mastromonaco, Andrew C Bentley, Byra

Journal:

Year:

2012

Language:

english

File:

PDF, 308 KB

english, 2012

59

Pharmacokinetics and Pharmacodynamics of Systemically Administered Glucocorticoids

David Czock, Dr Frieder Keller, Franz Maximilian Rasche, Ulla Häussler

Journal:

Clinical Pharmacokinetics

Year:

2005

Language:

english

File:

PDF, 555 KB

english, 2005

60

Improved Splice Site Detection in Genie

REESE, MARTIN G., EECKMAN, FRANK H., KULP, DAVID, HAUSSLER, DAVID

Journal:

Journal of Computational Biology

Year:

1997

Language:

english

File:

PDF, 2.52 MB

english, 1997

61

Hotspots of mammalian chromosomal evolution

Jeffrey A Bailey, Robert Baertsch, W James Kent, David Haussler…

Journal:

Year:

2004

Language:

english

File:

PDF, 252 KB

english, 2004

62

Cactus Graphs for Genome Comparisons

Paten, Benedict, Diekhans, Mark, Earl, Dent, John, John St., Ma, Jian, Suh, Bernard, Haussler, David

Journal:

Journal of Computational Biology

Year:

2011

Language:

english

File:

PDF, 644 KB

english, 2011

63

Identification and quantitation of intracellular retinol and retinoic acid binding proteins in cultured cells

Haussler, Mark R., Donaldson, Carol A., Kelly, Michael A., Mangelsdorf, David J., Bowden, G.Timothy, Meinke, William J., Meyskens, Frank L., Sidell, Neil

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research

Year:

1984

Language:

english

File:

PDF, 646 KB

english, 1984

64

[Part 1: Biological Sciences] || Specific High-Affinity Binding and Biologic Action of Retinoic Acid in Human Neuroblastoma Cell Lines

Mark Haussler, Neil Sidell, Michael Kelly, Carol Donaldson, Adrienne Altman and David Mangelsdorf

Journal:

Proceedings of the National Academy of Sciences

Year:

1983

Language:

english

File:

PDF, 1.38 MB

english, 1983

65

Avian and Mammalian Receptors for 1,25-dihydroxyvitamin D3: In vitro Translation to Characterize Size and Hormone-Dependent Regulation

David J. Mangelsdorf, J. Wesley Pike and Mark R. Haussler

Journal:

Proceedings of the National Academy of Sciences

Year:

1987

Language:

english

File:

PDF, 1.05 MB

english, 1987

66

Cloning and Expression of Full-Length cDNA Encoding Human Vitamin D Receptor

Andrew R. Baker, Donald P. McDonnell, Mark Hughes, Tracey M. Crisp, David J. Mangelsdorf, Mark R. Haussler, J. Wesley Pike, John Shine and Bert W. O'Malley

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 864 KB

english, 1988

67

1,25-Dihydroxyvitamin D3-Induced Differentiation in a Human Promyelocytic Leukemia Cell Line (HL-60): Receptor-Mediated Maturation to Macrophage-Like Cells

David J. Mangelsdorf, H. Phillip Koeffler, Carol A. Donaldson, J. Wesley Pike and Mark R. Haussler

Journal:

The Journal of Cell Biology

Year:

1984

Language:

english

File:

PDF, 1.28 MB

english, 1984

68

Generalization performance of Bayes optimal classification algorithm for learning a perceptron

Opper, Manfred, Haussler, David

Journal:

Physical Review Letters

Year:

1991

Language:

english

File:

PDF, 230 KB

english, 1991

69

Filter assay for 1α,25-dihydroxyvitamin D 3 . Utilization of the hormone's target tissue chromatin receptor

Brumbaugh, Peter F., Haussler, David H., Bursac, Kristine M., Haussler, Mark R.

Journal:

Year:

1974

Language:

english

File:

PDF, 848 KB

english, 1974

70

A unifying model of genome evolution under parsimony

Benedict Paten,Daniel R Zerbino,Glenn Hickey,David Haussler

Journal:

BMC Bioinformatics

Year:

2014

Language:

english

File:

PDF, 3.73 MB

english, 2014

71

An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons

Jacobs, Frank M. J., Greenberg, David, Nguyen, Ngan, Haeussler, Maximilian, Ewing, Adam D., Katzman, Sol, Paten, Benedict, Salama, Sofie R., Haussler, David

Journal:

Year:

2014

Language:

english

File:

PDF, 6.90 MB

english, 2014

72

Immunoselection of cDNAs to avian intestinal calcium binding protein 28K and a novel calmodulin-like protein: assessment of mRNA regulation by the vitamin D hormone

Mangelsdorf, David J., Komm, Barry S., McDonnell, Donald P., Pike, J. Wesley, Haussler, Mark R.

Journal:

Year:

1987

Language:

english

File:

PDF, 2.30 MB

english, 1987

73

1α-Hydroxyvitamin D 3 . Analog of vitamin D which apparently acts by metabolism to 1α,25-dihydroxyvitamin D 3

Zerwekh, Joseph E., Brumbaugh, Peter F., Haussler, David H., Cork, Douglas J., Haussler, Mark R.

Journal:

Year:

1974

Language:

english

File:

PDF, 691 KB

english, 1974

74

Stochastic context-free grammers for tRNA modeling

Sakakibara, Yasubumi, Brown, Michael, Hughey, Richard, Mian, I. Saira, Sjölander, Kimmen, Underwood, Rebecca C., Haussler, David

Journal:

Nucleic Acids Research

Year:

1994

Language:

english

File:

PDF, 959 KB

english, 1994

75

High-Affinity Androgen Binding and Androgenic Regulation of α1(I)-Procollagen and Transforming Growth Factor-β Steady State Messenger Ribonucleic Acid Levels in Human Osteoblast-Like Osteosarcoma Cells*

BENZ, DAVID J., HAUSSLER, MARK R., THOMAS, MITCHELL A., SPEELMAN, BECKY, KOMM, BARRY S.

Journal:

Year:

1991

Language:

english

File:

PDF, 1.40 MB

english, 1991

76

[IEEE 1993 IEEE 34th Annual Foundations of Computer Science - Palo Alto, CA, USA (3-5 Nov. 1993)] Proceedings of 1993 IEEE 34th Annual Foundations of Computer Science - Scale-sensitive dimensions, uniform convergence, and learnability

Alon, N., Ben-David, S., Cesa-Bianchi, N., Haussler, D.

Year:

1993

Language:

english

File:

PDF, 751 KB

english, 1993

77

Coding Exon Detection Using Comparative Sequences

Wu, Jing, Haussler, David

Journal:

Journal of Computational Biology

Year:

2006

Language:

english

File:

PDF, 940 KB

english, 2006

78

Combining Phylogenetic and Hidden Markov Models in Biosequence Analysis

Siepel, Adam, Haussler, David

Journal:

Journal of Computational Biology

Year:

2004

Language:

english

File:

PDF, 179 KB

english, 2004

79

Bounds for Predictive Errors in the Statistical Mechanics of Supervised Learning

Opper, Manfred, Haussler, David

Journal:

Physical Review Letters

Year:

1995

Language:

english

File:

PDF, 255 KB

english, 1995

80

Score Functions for Determining Regional Conservation in Two-Species Local Alignments

Roskin, Krishna M., Diekhans, Mark, Haussler, David

Journal:

Journal of Computational Biology

Year:

2004

Language:

english

File:

PDF, 214 KB

english, 2004

81

A Discriminative Framework for Detecting Remote Protein Homologies

Jaakkola, Tommi, Diekhans, Mark, Haussler, David

Journal:

Journal of Computational Biology

Year:

2000

Language:

english

File:

PDF, 274 KB

english, 2000

82

Building a Pan-Genome Reference for a Population

Nguyen, Ngan, Hickey, Glenn, Zerbino, Daniel R., Raney, Brian, Earl, Dent, Armstrong, Joel, Kent, W. James, Haussler, David, Paten, Benedict

Journal:

Journal of Computational Biology

Year:

2015

Language:

english

File:

PDF, 1.62 MB

english, 2015

83

The birds of Genome10K

OBrien, Stephen J, Haussler, David, Ryder, Oliver

Journal:

Year:

2014

Language:

english

File:

PDF, 1.64 MB

english, 2014

84

Identification and Classification of Conserved RNA Secondary Structures in the Human Genome

Pedersen, Jakob Skou, Bejerano, Gill, Siepel, Adam, Rosenbloom, Kate, Lindblad-Toh, Kerstin, Lander, Eric S., Kent, Jim, Miller, Webb, Haussler, David

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 1.19 MB

english, 2006

85

Probabilistic Phylogenetic Inference with Insertions and Deletions

Rivas, Elena, Eddy, Sean R., Haussler, David

Journal:

PLoS Computational Biology

Year:

2008

Language:

english

File:

PDF, 683 KB

english, 2008

86

The Structure of a Rigorously Conserved RNA Element within the SARS Virus Genome

Robertson, Michael P., Igel, Haller, Baertsch, Robert, Haussler, David, Ares, Manuel, Scott, William G.

Journal:

Year:

2005

Language:

english

File:

PDF, 10.31 MB

english, 2005

87

Detecting Coevolution in and among Protein Domains

Yeang, Chen-Hsiang, Haussler, David

Journal:

PLoS Computational Biology

Year:

2007

Language:

english

File:

PDF, 663 KB

english, 2007

88

Unusual Intron Conservation near Tissue-Regulated Exons Found by Splicing Microarrays

Sugnet, Charles W., Srinivasan, Karpagam, Clark, Tyson A., O'Brien, Georgeann, Cline, Melissa S., Wang, Hui, Williams, Alan, Kulp, David, Blume, John E., Haussler, David, Ares, Manuel

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 667 KB

english, 2006

89

Comparative Genomics Search for Losses of Long-Established Genes on the Human Lineage

Zhu, Jingchun, Sanborn, J. Zachary, Diekhans, Mark, Lowe, Craig B., Pringle, Tom H., Haussler, David

Journal:

PLoS Computational Biology

Year:

2007

Language:

english

File:

PDF, 486 KB

english, 2007

90

GC-Biased Evolution Near Human Accelerated Regions

Katzman, Sol, Kern, Andrew D., Pollard, Katherine S., Salama, Sofie R., Haussler, David, Zhang, Jianzhi

Journal:

Year:

2010

Language:

english

File:

PDF, 220 KB

english, 2010

91

Mining scientific data

Fayyad, Usama, Haussler, David, Stolorz, Paul

Journal:

Communications of the ACM

Year:

1996

Language:

english

File:

PDF, 4.14 MB

english, 1996

92

Counterexample to a Claim About the Reconstruction of Ancestral Character States

Lucena, Brian, Haussler, David

Journal:

Systematic Biology

Year:

2005

Language:

english

File:

PDF, 233 KB

english, 2005

93

Exploring TCGA Pan-Cancer Data at the UCSC Cancer Genomics Browser

Cline, Melissa S., Craft, Brian, Swatloski, Teresa, Goldman, Mary, Ma, Singer, Haussler, David, Zhu, Jingchun

Journal:

Scientific Reports

Year:

2013

Language:

english

File:

PDF, 1.38 MB

english, 2013

94

Canonical, Stable, General Mapping using Context Schemes

Novak, Adam M, Rosen, Yohei, Haussler, David, Paten, Benedict

Journal:

Year:

2015

Language:

english

File:

PDF, 354 KB

english, 2015

95

[ACM Press the twenty-fifth annual ACM symposium - San Diego, California, United States (1993.05.16-1993.05.18)] Proceedings of the twenty-fifth annual ACM symposium on Theory of computing - STOC '93 - How to use expert advice

Cesa-Bianchi, Nicolò, Freund, Yoav, Helmbold, David P., Haussler, David, Schapire, Robert E., Warmuth, Manfred K.

Year:

1993

Language:

english

File:

PDF, 1.10 MB

english, 1993

96

[ACM Press the seventh annual conference - New Brunswick, New Jersey, United States (1994.07.12-1994.07.15)] Proceedings of the seventh annual conference on Computational learning theory - COLT '94 - Rigorous learning curve bounds from statistical mechanics

Haussler, David, Seung, H. Sebastian, Kearns, Michael, Tishby, Naftali

Year:

1994

Language:

english

File:

PDF, 1.33 MB

english, 1994

97

How to use expert advice

Cesa-Bianchi, Nicolò, Freund, Yoav, Haussler, David, Helmbold, David P., Schapire, Robert E., Warmuth, Manfred K.

Journal:

Journal of the ACM

Year:

1997

Language:

english

File:

PDF, 683 KB

english, 1997

98

[ACM Press the 40th annual ACM symposium - Victoria, British Columbia, Canada (2008.05.17-2008.05.20)] Proceedings of the fourtieth annual ACM symposium on Theory of computing - STOC 08 - Computing how we became human

Haussler, David

Year:

2008

Language:

english

File:

PDF, 134 KB

english, 2008

99

[ACM Press the eighth annual conference - Santa Cruz, California, United States (1995.07.05-1995.07.08)] Proceedings of the eighth annual conference on Computational learning theory - COLT '95 - General bounds on the mutual information between a parameter and n conditionally independent observations

Haussler, David, Opper, Manfred

Year:

1995

Language:

english

File:

PDF, 915 KB

english, 1995

100

[ACM Press the tenth annual conference - Nashville, Tennessee, United States (1997.07.06-1997.07.09)] Proceedings of the tenth annual conference on Computational learning theory - COLT '97 - A brief look at some machine learning problems in genomics

Haussler, David

Year:

1997

Language:

english

File:

PDF, 727 KB

english, 1997

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