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51

The δ Subunit of Bacillus subtilis RNA Polymerase: An Allosteric Effector of the Initiation and Core-recycling Phases of Transcription

Yue-Li Juang, John D. Helmann

Journal:

Journal of Molecular Biology

Year:

1994

File:

PDF, 1.02 MB

1994

52

TheBacillus subtilisFlagellar Regulatory Protein σD: Overproduction, Domain Analysis and DNA-binding Properties

Ya-Fen Chen, John D. Helmann

Journal:

Journal of Molecular Biology

Year:

1995

Language:

english

File:

PDF, 1.01 MB

english, 1995

53

Structural Analysis of theBacillus subtilisδ Factor: A protein Polyanion which Displaces RNA from RNA Polymerase

Francisco J. López de Saro, A-Young Moon Woody, John D. Helmann

Journal:

Journal of Molecular Biology

Year:

1995

Language:

english

File:

PDF, 908 KB

english, 1995

54

DNA-melting at the Bacillus subtilis flagellin promoter nucleates near −10 and expands unidirectionally

Ya-Fen Chen, John D Helmann

Journal:

Journal of Molecular Biology

Year:

1997

Language:

english

File:

PDF, 543 KB

english, 1997

55

Identification of target promoters for the Bacillus subtilis σX factor using a consensus-directed search

Xuejun Huang, John D Helmann

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 323 KB

english, 1998

56

Defining the Bacillus subtilis σW regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches

Min Cao, Phil A Kobel, Maud M Morshedi, Ming Fang Winston Wu, Chris Paddon, John D Helmann

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 428 KB

english, 2002

57

The Conformations of the Manganese Transport Regulator of Bacillus subtilis in its Metal-free State

Mark A. DeWitt, Joseph I. Kliegman, John D. Helmann, Richard G. Brennan, David L. Farrens, Arthur Glasfeld

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.16 MB

english, 2007

58

Metal ion homeostasis in Bacillus subtilis

Charles M Moore, John D Helmann

Journal:

Current Opinion in Microbiology

Year:

2005

Language:

english

File:

PDF, 2.84 MB

english, 2005

59

Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family

Minsun Hong, Mayuree Fuangthong, John D. Helmann, Richard G. Brennan

Journal:

Year:

2005

Language:

english

File:

PDF, 844 KB

english, 2005

60

RNA polymerase: A nexus of gene regulation

John D. Helmann

Journal:

Year:

2009

Language:

english

File:

PDF, 162 KB

english, 2009

61

ROMA: An in vitro approach to defining target genes for transcription regulators

Shawn R. MacLellan, Warawan Eiamphungporn, John D. Helmann

Journal:

Year:

2009

Language:

english

File:

PDF, 335 KB

english, 2009

62

AbrB is a regulator of the σW regulon in Bacillus subtilis

Qiang Qian, Chien Y Lee, John D Helmann, Mark A Strauch

Journal:

FEMS Microbiology Letters

Year:

2002

Language:

english

File:

PDF, 255 KB

english, 2002

63

Anti-sigma factors

Journal:

Current Opinion in Microbiology

Year:

1999

Language:

english

File:

PDF, 1.28 MB

english, 1999

64

Role of the Fur Regulon in Iron Transport in Bacillus subtilis

Ollinger, J., Song, K.-B., Antelmann, H., Hecker, M., Helmann, J. D.

Journal:

Journal of Bacteriology

Year:

2006

Language:

english

File:

PDF, 540 KB

english, 2006

65

The A. tumefaciens transcriptional activator OccR causes a bend at a target promoter, which is partially relaxed by a plant tumor metabolite

Lu Wang, John D. Helmann, Stephen C. Winans

Journal:

Year:

1992

Language:

english

File:

PDF, 1.48 MB

english, 1992

66

Origins of specificity and cross-talk in metal ion sensing by Bacillus subtilis Fur

Ma, Zhen, Faulkner, Melinda J., Helmann, John D.

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 681 KB

english, 2012

67

Changes to the editorial team at Molecular Microbiology

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 239 KB

english, 2012

68

RaoN, a small RNA encoded within Salmonella pathogenicity island-11, confers resistance to macrophage-induced stress

Lee, Y. H., Kim, S., Helmann, J. D., Kim, B.-H., Park, Y. K.

Journal:

Microbiology (Society for General Microbiology)

Year:

2013

Language:

english

File:

PDF, 907 KB

english, 2013

69

Roles of the A and C Sites in the Manganese-Specific Activation of MntR

McGuire, Amanda M., Cuthbert, Bonnie J., Ma, Zhen, Grauer-Gray, Kristen D., Brunjes Brophy, Megan, Spear, Kayce A., Soonsanga, Sumarin, Kliegman, Joseph I., Griner, Sarah L., Helmann, John D., Glasfel

Journal:

Year:

2013

Language:

english

File:

PDF, 1.83 MB

english, 2013

70

The σ70family of sigma factors

Mark SB Paget, John D Helmann

Journal:

Year:

2003

Language:

english

File:

PDF, 120 KB

english, 2003

71

Contributions of the σ W , σ M and σ X regulons to the lantibiotic resistome of Bacillus subtilis

Kingston, Anthony W., Liao, Xiaojie, Helmann, John D.

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 1.30 MB

english, 2013

72

Thiol-Based Redox Switches and Gene Regulation

Antelmann, Haike, Helmann, John D.

Journal:

Antioxidants & Redox Signaling

Year:

2011

Language:

english

File:

PDF, 640 KB

english, 2011

73

Regulation of Bacillus subtilis bacillithiol biosynthesis operons by Spx

Gaballa, A., Antelmann, H., Hamilton, C. J., Helmann, J. D.

Journal:

Microbiology (Society for General Microbiology)

Year:

2013

Language:

english

File:

PDF, 1.02 MB

english, 2013

74

Redox Regulation in Bacillus subtilis : The Bacilliredoxins BrxA(YphP) and BrxB(YqiW) Function in De-Bacillithiolation of S -Bacillithiolated OhrR and MetE

Gaballa, Ahmed, Chi, Bui Khanh, Roberts, Alexandra A., Becher, Dörte, Hamilton, Chris J., Antelmann, Haike, Helmann, John D.

Journal:

Antioxidants & Redox Signaling

Year:

2014

Language:

english

File:

PDF, 1.02 MB

english, 2014

75

Chemical Structure and Biological Activity of A Siderophore Produced by Rhizopus arrhizus

Shenker, M., Chen, Y., Ghirlando, R., Oliver, I., Helmann, M., Hadar, Y.

Journal:

Soil Science Society of America Journal

Year:

1995

Language:

english

File:

PDF, 324 KB

english, 1995

76

Methylglyoxal resistance in B acillus subtilis : contributions of bacillithiol-dependent and independent pathways

Chandrangsu, Pete, Dusi, Renata, Hamilton, Chris J., Helmann, John D.

Journal:

Molecular Microbiology

Year:

2014

Language:

english

File:

PDF, 457 KB

english, 2014

77

Single-Molecule Analysis Suggests Two Novel Pathways for Turning Off Transcription by a MerR-Family Metalloregulator

Joshi, Chandra P., Panda, Debashis, Martell, Danya J., Andoy, Nesha M., Chen, Tai-Yen, Gaballa, Ahmed, Helmann, John D., Chen, Peng

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 37 KB

english, 2013

78

The developmental fate of S. coelicolor hyphae depends upon a gene product homologous with the motility σ factor of B. subtilis

Chater, Keith F., Bruton, Celia J., Plaskitt, Kitty A., Buttner, Mark J., Méndez, Carmen, Helmann, John D.

Journal:

Year:

1989

Language:

english

File:

PDF, 3.34 MB

english, 1989

79

DNA Sequence Analysis Suggests that Expression of Flagellar and Chemotaxis Genes in Escherichia coli and Salmonella typhimurium is Controlled by an Alternative σ Factor

John D. Helmann and Michael J. Chamberlin

Journal:

Proceedings of the National Academy of Sciences

Year:

1987

Language:

english

File:

PDF, 472 KB

english, 1987

80

RNA Polymerase Sigma Factor Determines Start-Site Selection but is not Required for Upstream Promoter Element Activation on Heteroduplex (bubble) Templates

Kurt Fredrick and John D. Helmann

Journal:

Proceedings of the National Academy of Sciences

Year:

1997

Language:

english

File:

PDF, 1.29 MB

english, 1997

81

Accumulation of heptaprenyl diphosphate sensitizes B acillus subtilis to bacitracin: implications for the mechanism of resistance mediated by the BceAB transporter

Kingston, Anthony W., Zhao, Heng, Cook, Gregory M., Helmann, John D.

Journal:

Molecular Microbiology

Year:

2014

Language:

english

File:

PDF, 2.35 MB

english, 2014

82

Gene Expression in Recombinant Microorganisms.by Alan Smith

Review by: John D. Helmann

Journal:

Quarterly Review of Biology

Year:

1996

Language:

english

File:

PDF, 380 KB

english, 1996

83

Essentials of Molecular Biology.by David Freifelder; George M. Malacinski

Review by: John D. Helmann

Journal:

Quarterly Review of Biology

Year:

1993

Language:

english

File:

PDF, 351 KB

english, 1993

84

Bacillithiol, a New Player in Bacterial Redox Homeostasis

Helmann, John D.

Journal:

Antioxidants & Redox Signaling

Year:

2011

Language:

english

File:

PDF, 438 KB

english, 2011

85

Peroxide Stress Elicits Adaptive Changes in Bacterial Metal Ion Homeostasis

Faulkner, Melinda J., Helmann, John D.

Journal:

Antioxidants & Redox Signaling

Year:

2011

Language:

english

File:

PDF, 781 KB

english, 2011

86

Jñānalakṣaṇāvicārarahasyam of Śrī Harirāma Tarkavāgīśa

Review by: Betty Helmann

Journal:

Journal of the Royal Asiatic Society of Great Britain & Ireland

Year:

1961

Language:

english

File:

PDF, 378 KB

english, 1961

87

Pathway of promoter melting by Bacillus subtilis RNA polymerase at a stable RNA promoter: Effects of temperature, .delta. protein, and .sigma. factor mutations

Juang, Yue-Li, Helmann, John D.

Journal:

Year:

1995

Language:

english

File:

PDF, 2.91 MB

english, 1995

88

The Global Transcriptional Response of Bacillus subtilis to Peroxide Stress Is Coordinated by Three Transcription Factors

Helmann, J. D., Wu, M. F. W., Gaballa, A., Kobel, P. A., Morshedi, M. M., Fawcett, P., Paddon, C.

Journal:

Journal of Bacteriology

Year:

2003

Language:

english

File:

PDF, 2.17 MB

english, 2003

89

Mutations in Sigma Factor That Affect the Temperature Dependence of Transcription from a Promoter, but Not from a Mismatch Bubble, in Double-Stranded DNA

Aiyar, Sarah E., Juang, Yue-Li, Helmann, John D., deHaseth, Pieter L.

Journal:

Year:

1994

Language:

english

File:

PDF, 1.71 MB

english, 1994

90

Transcriptional switching by the MerR protein: activation and repression mutants implicate distinct DNA and mercury(II) binding domains

Shewchuk, Lisa M., Helmann, John D., Ross, Wilma, Park, Soon Jung, Summers, Anne O., Walsh, Christopher T.

Journal:

Year:

1989

Language:

english

File:

PDF, 1.90 MB

english, 1989

91

Sequential binding and sensing of Zn(II) by Bacillus subtilis Zur

Ma, Z., Gabriel, S. E., Helmann, J. D.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 2.64 MB

english, 2011

92

DNA-Binding and Oligomerization Studies of the Manganese(II) Metalloregulatory Protein MntR from Bacillus subtilis †

Lieser, Scot A., Davis, Talib C., Helmann, John D., Cohen, Seth M.

Journal:

Year:

2003

Language:

english

File:

PDF, 113 KB

english, 2003

93

Specificity of Metal Sensing: Iron and Manganese Homeostasis in Bacillus subtilis

Journal:

Journal of Biological Chemistry

Year:

2014

Language:

english

File:

PDF, 1.71 MB

english, 2014

94

Metal-Induced Structural Organization and Stabilization of the Metalloregulatory Protein MntR †

Golynskiy, Misha V., Davis, Talib C., Helmann, John D., Cohen, Seth M.

Journal:

Year:

2005

Language:

english

File:

PDF, 411 KB

english, 2005

95

Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis †,‡

Kliegman, Joseph I., Griner, Sarah L., Helmann, John D., Brennan, Richard G., Glasfeld, Arthur

Journal:

Year:

2006

Language:

english

File:

PDF, 476 KB

english, 2006

96

Encyclopedia of Biological Chemistry || Sigma Factors

Year:

2013

Language:

english

File:

PDF, 78 KB

english, 2013

97

Bacillus subtilis V Confers Lysozyme Resistance by Activation of Two Cell Wall Modification Pathways, Peptidoglycan O-Acetylation and D-Alanylation of Teichoic Acids

Guariglia-Oropeza, V., Helmann, J. D.

Journal:

Journal of Bacteriology

Year:

2011

Language:

english

File:

PDF, 828 KB

english, 2011

98

An Antibiotic-Inducible Cell Wall-Associated Protein That Protects Bacillus subtilis from Autolysis

Salzberg, L. I., Helmann, J. D.

Journal:

Journal of Bacteriology

Year:

2007

Language:

english

File:

PDF, 564 KB

english, 2007

99

Bacillithiol is a major buffer of the labile zinc pool in B acillus subtilis

Ma, Zhen, Chandrangsu, Pete, Helmann, Tyler C., Romsang, Adisak, Gaballa, Ahmed, Helmann, John D.

Journal:

Molecular Microbiology

Year:

2014

Language:

english

File:

PDF, 2.46 MB

english, 2014

100

Lipid-linked cell wall precursors regulate membrane association of bacterial actin MreB

Schirner, Kathrin, Eun, Ye-Jin, Dion, Mike, Luo, Yun, Helmann, John D, Garner, Ethan C, Walker, Suzanne

Journal:

Nature Chemical Biology

Year:

2014

Language:

english

File:

PDF, 3.29 MB

english, 2014