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1

Tilapia recirculating aquaculture systems as a source of plant growth promoting bacteria

Sanchez, Francia A., Vivian‐Rogers, Valerie R., Urakawa, Hidetoshi

Journal:

Aquaculture Research

Year:

2019

Language:

english

File:

PDF, 724 KB

english, 2019

2

Tilapia recirculating aquaculture systems as a source of plant growth promoting bacteria

Sanchez, Francia A., Vivian‐Rogers, Valerie R., Urakawa, Hidetoshi

Journal:

Aquaculture Research

Year:

2019

File:

PDF, 724 KB

2019

3

Discrimination of Shifts in a Soil Microbial Community Associated with TNT-Contamination Using a Functional ANOVA of 16S rRNA Hybridized to Oligonucleotide Microarrays

Eyers, Laurent, Smoot, James C., Smoot, Laura M., Bugli, Céline, Urakawa, Hidetoshi, McMurry, Zack, Siripong, Slil, El Fantroussi, Said, Lambert, Philippe, Agathos, Spiros N., Stahl, David A.

Journal:

Environmental Science & Technology

Year:

2006

Language:

english

File:

PDF, 164 KB

english, 2006

4

The uniqueness and biogeochemical cycling of plant root microbial communities in a floating treatment wetland

Urakawa, Hidetoshi, Dettmar, Dana L., Thomas, Serge

Journal:

Ecological Engineering

Year:

2017

Language:

english

File:

PDF, 1.68 MB

english, 2017

5

Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling

Hidetoshi Urakawa, Tsutomu Yoshida, Masahiko Nishimura, Kouichi Ohwada

Journal:

Environmental Microbiology

Year:

2000

Language:

english

File:

PDF, 807 KB

english, 2000

6

A New Approach to Separate the GenusPhotobacteriumfromVibriowith RFLP Patterns byHhaI Digestion of PCR-Amplified 16S rDNA

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Kouichi Ohwada

Journal:

Current Microbiology

Year:

1998

Language:

english

File:

PDF, 216 KB

english, 1998

7

Development of a 60-mer oligonucleotide microarray on the basis of benzene monooxygenase gene diversity

Shoko Iwai, Futoshi Kurisu, Hidetoshi Urakawa, Osami Yagi, Hiroaki Furumai

Journal:

Applied Microbiology and Biotechnology

Year:

2007

Language:

english

File:

PDF, 419 KB

english, 2007

8

Characterization of Psychrotrophic Bacteria in the Surface and Deep-Sea Waters from the Northwestern Pacific Ocean Based on 16S Ribosomal DNA Analysis

Ocky Karna Radjasa, Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Kouichi Ohwada

Journal:

Marine Biotechnology

Year:

2001

Language:

english

File:

PDF, 505 KB

english, 2001

9

Characterization of depth-related changes and site-specific differences of microbial communities in marine sediments using quinone profiles

Hidetoshi URAKAWA, Tsutomu YOSHIDA, Masahiko NISHIMURA, Kouichi OHWADA

Journal:

Fisheries Science

Year:

2005

Language:

english

File:

PDF, 201 KB

english, 2005

10

Hydrothermal vent gastropods from the same family (Provannidae) harbour ɛ- and γ-proteobacterial endosymbionts

Hidetoshi Urakawa, Nicole Dubilier, Yoshihiro Fujiwara, Dale E. Cunningham, Shigeaki Kojima, David A. Stahl

Journal:

Environmental Microbiology

Year:

2005

Language:

english

File:

PDF, 592 KB

english, 2005

11

Characterization and quantification of ammonia-oxidizing bacteria in eutrophic coastal marine sediments using polyphasic molecular approaches and immunofluorescence staining

Hidetoshi Urakawa, Shinya Kurata, Taketomo Fujiwara, Daisuke Kuroiwa, Hideaki Maki, Sumiko Kawabata, Takehiko Hiwatari, Haruo Ando, Toshio Kawai, Masataka Watanabe, Kunio Kohata

Journal:

Environmental Microbiology

Year:

2006

Language:

english

File:

PDF, 513 KB

english, 2006

12

16S rDNA genotyping using PCR/RFLP (restriction fragment length polymorphism) analysis among the family Vibrionaceae

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Kouichi Ohwada

Journal:

FEMS Microbiology Letters

Year:

1997

Language:

english

File:

PDF, 607 KB

english, 1997

13

A proposal to transfer Vibrio marinus (Russell 1891) to a new genus Moritella gen. nov. as Moritella marina comb. nov.

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Sue E Steven, Kouichi Ohwada, Rita R Colwell

Journal:

FEMS Microbiology Letters

Year:

1998

Language:

english

File:

PDF, 252 KB

english, 1998

14

Corrigendum to “A proposal to transfer Vibrio marinus (Russell 1891) to a new genus Moritella gen. nov. as Moritella marina comb. nov.” : [FEMS Microbiol. Lett. 165 (1998) 373–378]

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Sue E Steven, Kouichi Ohwada, Rita R Colwell

Journal:

FEMS Microbiology Letters

Year:

1998

Language:

english

File:

PDF, 114 KB

english, 1998

15

DNA microarray mediated transcriptional profiling of Nitrosomonas europaea in response to linear alkylbenzene sulfonates

Hidetoshi Urakawa, Junpei Matsumoto, Kazuho Inaba, Satoshi Tsuneda

Journal:

FEMS Microbiology Letters

Year:

2008

Language:

english

File:

PDF, 116 KB

english, 2008

16

Development of an oligonucleotide microarray to detect di- and monooxygenase genes for benzene degradation in soil

Shoko Iwai, Futoshi Kurisu, Hidetoshi Urakawa, Osami Yagi, Ikuro Kasuga, Hiroaki Furumai

Journal:

FEMS Microbiology Letters

Year:

2008

Language:

english

File:

PDF, 559 KB

english, 2008

17

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

Martens-Habbena, Willm, Berube, Paul M., Urakawa, Hidetoshi, de la Torre, José R., Stahl, David A.

Journal:

Year:

2009

Language:

english

File:

PDF, 461 KB

english, 2009

18

A sensitive crude oil bioassay indicates that oil spills potentially induce a change of major nitrifying prokaryotes from the Archaea to the Bacteria

Hidetoshi Urakawa, Juan C. Garcia, Patricia D. Barreto, Gabriela A. Molina, Jose C. Barreto

Journal:

Environmental Pollution

Year:

2012

Language:

english

File:

PDF, 450 KB

english, 2012

19

Changes in intact membrane lipid content of archaeal cells as an indication of metabolic status

Carme Huguet, Hidetoshi Urakawa, Willm Martens-Habbena, Laura Truxal, David A. Stahl, Anitra E. Ingalls

Journal:

Organic Geochemistry

Year:

2010

Language:

english

File:

PDF, 490 KB

english, 2010

20

DNA microarray detection of nitrifying bacterial 16S rRNA in wastewater treatment plant samples

John J. Kelly, Slil Siripong, John McCormack, Lori R. Janus, Hidetoshi Urakawa, Said El Fantroussi, Peter A. Noble, Laura Sappelsa, Bruce E. Rittmann, David A. Stahl

Journal:

Year:

2005

Language:

english

File:

PDF, 338 KB

english, 2005

21

16S rDNA genotyping using PCR/RFLP (restriction fragment length polymorphism) analysis among the family Vibrionaceae

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Kouichi Ohwada

Journal:

FEMS Microbiology Letters

Year:

1997

Language:

english

File:

PDF, 1.22 MB

english, 1997

22

A proposal to transfer Vibrio marinus (Russell 1891) to a new genus Moritella gen. nov. as Moritella marina comb. nov.

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Sue E Steven, Kouichi Ohwada, Rita R Colwell

Journal:

FEMS Microbiology Letters

Year:

1998

Language:

english

File:

PDF, 254 KB

english, 1998

23

Corrigendum to ``A proposal to transfer Vibrio marinus (Russell 1891) to a new genus Moritella gen. nov. as Moritella marina comb. nov.'': [FEMS Microbiol. Lett. 165 (1998) 373–378]

Hidetoshi Urakawa, Kumiko Kita-Tsukamoto, Sue E Steven, Kouichi Ohwada, Rita R Colwell

Journal:

FEMS Microbiology Letters

Year:

1998

Language:

english

File:

PDF, 115 KB

english, 1998

24

Delayed Complications in Patients Surviving at Least 3 Years After Stereotactic Radiosurgery for Brain Metastases

Masaaki Yamamoto, Takuya Kawabe, Yoshinori Higuchi, Yasunori Sato, Tadashi Nariai, Bierta E. Barfod, Hidetoshi Kasuya, Yoichi Urakawa

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2013

Language:

english

File:

PDF, 911 KB

english, 2013

25

Subclassification of Recursive Partitioning Analysis Class II Patients With Brain Metastases Treated Radiosurgically

Masaaki Yamamoto, Yasunori Sato, Toru Serizawa, Takuya Kawabe, Yoshinori Higuchi, Osamu Nagano, Bierta E. Barfod, Junichi Ono, Hidetoshi Kasuya, Yoichi Urakawa

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2012

Language:

english

File:

PDF, 419 KB

english, 2012

26

Validity of Three Recently Proposed Prognostic Grading Indexes for Breast Cancer Patients With Radiosurgically Treated Brain Metastases

Masaaki Yamamoto, Takuya Kawabe, Yoshinori Higuchi, Yasunori Sato, Bierta E. Barfod, Hidetoshi Kasuya, Yoichi Urakawa

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2012

Language:

english

File:

PDF, 408 KB

english, 2012

27

In Reply to Sperduto et al

Masaaki Yamamoto, Yasunori Sato, Toru Serizawa, Takuya Kawabe, Yoshinori Higuchi, Osamu Nagano, Bierta E. Barfod, Junichi Ono, Hidetoshi Kasuya, Yoichi Urakawa

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2012

Language:

english

File:

PDF, 174 KB

english, 2012

28

Restriction fragment length polymorphism analysis of psychrophilic and psychrotrophic Vibrio and Photobacterium from the north-western Pacific Ocean and Otsuchi Bay, Japan

Urakawa, Hidetoshi, Kita-Tsukamoto, Kumiko, Ohwada, Kouichi

Journal:

Canadian Journal of Microbiology

Year:

1999

Language:

english

File:

PDF, 191 KB

english, 1999

29

16S rDNA restriction fragment length polymorphism analysis of psychrotrophic vibrios from Japanese coastal water

Urakawa, Hidetoshi, Kita-Tsukamoto, Kumiko, Ohwada, Kouichi

Journal:

Canadian Journal of Microbiology

Year:

1999

File:

PDF, 177 KB

1999

30

The production of nitric oxide by marine ammonia-oxidizing archaea and inhibition of archaeal ammonia oxidation by a nitric oxide scavenger

Martens-Habbena, Willm, Qin, Wei, Horak, Rachel E. A., Urakawa, Hidetoshi, Schauer, Andrew J., Moffett, James W., Armbrust, E. Virginia, Ingalls, Anitra E., Devol, Allan H., Stahl, David A.

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 966 KB

english, 2015

31

Influence of freshwater discharge on the microbial degradation processes of dissolved organic nitrogen in a subtropical estuary

Garcia, Juan C., Ketover, Rheannon D. J., Loh, Ai Ning, Parsons, Michael L., Urakawa, Hidetoshi

Journal:

Antonie van Leeuwenhoek

Year:

2015

Language:

english

File:

PDF, 2.81 MB

english, 2015

32

T-BAPS: A Bayesian Statistical Tool for Comparison of Microbial Communities Using Terminal-restriction Fragment Length Polymorphism (T-RFLP) Data

Tang, Jing, Tao, Jinglun, Urakawa, Hidetoshi, Corander, Jukka

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2007

Language:

english

File:

PDF, 360 KB

english, 2007

33

Comparison of extraction methods for quantitative analysis of core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in environmental samples

Huguet, Carme, Martens-Habbena, Willm, Urakawa, Hidetoshi, Stahl, David A., Ingalls, Anitra E.

Journal:

Limnology and Oceanography Methods

Year:

2010

Language:

english

File:

PDF, 499 KB

english, 2010

34

Microminiaturized Aspherical Single Lens with Numerical Aperture of 0.9 for Blue Laser Diode

Miura, Takahiro, Yamada, Masahiro, Aoki, Sunao, Kanazawa, Takakiyo, Urakawa, Yoshiyuki, Watanabe, Hidetoshi, Watanabe, Tetsu

Journal:

Japanese Journal of Applied Physics

Year:

2004

Language:

english

File:

PDF, 94 KB

english, 2004

35

Microbial diversity in marine sediments from Sagami Bay and Tokyo Bay, Japan, as determined by 16S rRNA gene analysis

Ohwada, Kouichi, Kita-Tsukamoto, Kumiko, Urakawa, Hidetoshi

Journal:

Microbiology (Society for General Microbiology)

Year:

1999

Language:

english

File:

PDF, 467 KB

english, 1999

36

A case-matched study of stereotactic radiosurgery for patients with multiple brain metastases: comparing treatment results for 1–4 vs ≥ 5 tumors

Yamamoto, Masaaki, Kawabe, Takuya, Sato, Yasunori, Higuchi, Yoshinori, Nariai, Tadashi, Barfod, Bierta E., Kasuya, Hidetoshi, Urakawa, Yoichi

Journal:

Journal of Neurosurgery

Year:

2013

Language:

english

File:

PDF, 1.96 MB

english, 2013

37

Ammonia availability shapes the seasonal distribution and activity of archaeal and bacterial ammonia oxidizers in the Puget Sound Estuary

Urakawa, Hidetoshi, Martens-Habbena, Willm, Huguet, Carme, de la Torre, Jose R., Ingalls, Anitra E., Devol, Allan H., Stahl, David A.

Journal:

Limnology and Oceanography

Year:

2014

Language:

english

File:

PDF, 1.29 MB

english, 2014

38

Direct Profiling of rRNA in Saline Wastewater Treatment Samples Using an Oligonucleotide Microarray

Urakawa, Hidetoshi, Matsumoto, Junpei, Hoshino, Tatsuhiko, Tsuneda, Satoshi

Journal:

Microbes and Environments

Year:

2007

Language:

english

File:

PDF, 816 KB

english, 2007

39

Molecular ecology of marine microorganisms

URAKAWA, HIDETOSHI

Journal:

NIPPON SUISAN GAKKAISHI

Year:

2006

File:

PDF, 236 KB

2006

40

Wetland management using microbial indicators

Urakawa, Hidetoshi, Bernhard, Anne E.

Journal:

Ecological Engineering

Year:

2017

Language:

english

File:

PDF, 3.88 MB

english, 2017

41

Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations

Qin, Wei, Amin, Shady A, Lundeen, Rachel A, Heal, Katherine R, Martens-Habbena, Willm, Turkarslan, Serdar, Urakawa, Hidetoshi, Costa, Kyle C, Hendrickson, Erik L, Wang, Tony, Beck, David AC, Tiquia-Ar

Journal:

The ISME Journal

Year:

2017

Language:

english

File:

PDF, 1.39 MB

english, 2017

42

Terrestrial Snake Environmental DNA Accumulation and Degradation Dynamics and its Environmental Application

Kucherenko, Alexander, Herman, John E., III, Edwin M. Everham, Urakawa, Hidetoshi

Journal:

Year:

2018

Language:

english

File:

PDF, 479 KB

english, 2018

43

Phenotypic and functional analysis of bovine peripheral blood dendritic cells before parturition by a novel purification method

Zhuang, Tao, Urakawa, Megumi, Sato, Hidetoshi, Sato, Yuko, Taguchi, Teruaki, Umino, Tsuyoshi, Katto, Shiro, Tanaka, Koutaro, Yoshimura, Kozue, Takada, Naokazu, Kobayashi, Hiroko, Ito, Megumi, Rose, Mi

Journal:

Animal Science Journal

Year:

2018

Language:

english

File:

PDF, 1.41 MB

english, 2018

44

Ecological response of nitrification to oil spills and its impact on the nitrogen cycle

Urakawa, Hidetoshi, Rajan, Suja, Feeney, Megan E., Sobecky, Patricia A., Mortazavi, Behzad

Journal:

Environmental Microbiology

Year:

2018

File:

PDF, 2.06 MB

2018

45

SAE Technical Paper Series [SAE International International Conference On Environmental Systems - (JUL. 15, 2002)] SAE Technical Paper Series - DNA Microchip Based Microbial Monitoring of Environmental Systems

Stahl, David A., El Fantroussi, Said, Urakawa, Hidetoshi, Noble, Peter, Smidt, Hauke, Smoot, James, Kelly, John

Year:

2002

Language:

english

File:

PDF, 160 KB

english, 2002

46

Ecological response of nitrification to oil spills and its impact on the nitrogen cycle

Urakawa, Hidetoshi, Rajan, Suja, Feeney, Megan E., Sobecky, Patricia A., Mortazavi, Behzad

Journal:

Environmental Microbiology

Year:

2018

Language:

english

File:

PDF, 2.06 MB

english, 2018

47

Performance and microbial diversity of bioreactors using polycaprolactone and polyhydroxyalkanoate as carbon source and biofilm carrier in a closed recirculating aquaculture system

Lopardo, Cristina R., Urakawa, Hidetoshi

Journal:

Aquaculture International

Year:

2019

Language:

english

File:

PDF, 725 KB

english, 2019

48

Performance and microbial diversity of bioreactors using polycaprolactone and polyhydroxyalkanoate as carbon source and biofilm carrier in a closed recirculating aquaculture system

Lopardo, Cristina R., Urakawa, Hidetoshi

Journal:

Aquaculture International

Year:

2019

File:

PDF, 725 KB

2019

49

Hydrogen peroxide measurements in subtropical aquatic systems and their implications for cyanobacterial blooms

Ndungu, Luka K., Steele, Jacob H., Hancock, Taylor L., Bartleson, Richard D., Milbrandt, Eric C., Parsons, Michael L., Urakawa, Hidetoshi

Journal:

Ecological Engineering

Year:

2019

Language:

english

File:

PDF, 4.17 MB

english, 2019

50

Hydrogen peroxide measurements in subtropical aquatic systems and their implications for cyanobacterial blooms

Ndungu, Luka K., Steele, Jacob H., Hancock, Taylor L., Bartleson, Richard D., Milbrandt, Eric C., Parsons, Michael L., Urakawa, Hidetoshi

Journal:

Ecological Engineering

Year:

2019

File:

PDF, 4.17 MB

2019

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