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101

Insertions and Deletions Are Male Biased Too: A Whole-Genome Analysis in Rodents

Journal:

Genome Research

Year:

2004

Language:

english

File:

PDF, 166 KB

english, 2004

102

The effects of chromatin organization on variation in mutation rates in the genome

Makova, Kateryna D., Hardison, Ross C.

Journal:

Nature Reviews Genetics

Year:

2015

Language:

english

File:

PDF, 443 KB

english, 2015

103

Accurate typing of short tandem repeats from genome-wide sequencing data and its applications

Fungtammasan, Arkarachai, Ananda, Guruprasad, Hile, Suzanne E., Su, Marcia Shu-Wei, Sun, Chen, Harris, Robert, Medvedev, Paul, Eckert, Kristin, Makova, Kateryna D.

Journal:

Genome Research

Year:

2015

Language:

english

File:

PDF, 1.04 MB

english, 2015

104

Chemical Modification of High-Tc Superconducting EuBa2Cu3O7-X by Tin: Synthesis, Structure, and Gamma-Resonance Investigation

Dubovitskii, A.V., Kushch, N.D., Makova, M.K., Mailybaev, A.T., Merzhanov, V.A., Pesotskii, S.I., Kireev, N.V., Makarov, E.F., Stukan, R.A., Datt, I.D., Oserov, R.P., Shashkin, D.M.

Journal:

Materials Science Forum

Year:

1991

File:

PDF, 153 KB

1991

105

The Transcriptionally Active Amyloid Precursor Protein (APP) Intracellular Domain Is Preferentially Produced from the 695 Isoform of APP in a -Secretase-dependent Pathway

Belyaev, N. D., Kellett, K. A. B., Beckett, C., Makova, N. Z., Revett, T. J., Nalivaeva, N. N., Hooper, N. M., Turner, A. J.

Journal:

Journal of Biological Chemistry

Year:

2010

Language:

english

File:

PDF, 1.89 MB

english, 2010

106

Distinct Mutational Behaviors Differentiate Short Tandem Repeats from Microsatellites in the Human Genome

Ananda, G., Walsh, E., Jacob, K. D., Krasilnikova, M., Eckert, K. A., Chiaromonte, F., Makova, K. D.

Journal:

Genome Biology and Evolution

Year:

2013

Language:

english

File:

PDF, 481 KB

english, 2013

107

Conducting Cation-Radical Salts Bedt-TTF with Metal Complex Anions

Kushch, N.D., Ignatiev, A.A., Laukhin, V.N., Makova, M.K., Merzhanov, V.A., Rozenberg, L.B., Korotkov, V.E., Shibaeva, R.P., Yagubskii, E.B.

Journal:

Materials Science Forum

Year:

1991

File:

PDF, 158 KB

1991

108

Divergence in the Spatial Pattern of Gene Expression Between Human Duplicate Genes

Journal:

Genome Research

Year:

2003

Language:

english

File:

PDF, 239 KB

english, 2003

109

The genome-wide determinants of human and chimpanzee microsatellite evolution

Kelkar, Y. D., Tyekucheva, S., Chiaromonte, F., Makova, K. D.

Journal:

Genome Research

Year:

2007

Language:

english

File:

PDF, 572 KB

english, 2007

110

SMBE Proposal to the Government of Japan

Wolfe, K., Wayne, M. L., Makova, K., Steen, T. Y., Uyenoyama, M., Takahata, N.

Journal:

Molecular Biology and Evolution

Year:

2012

Language:

english

File:

PDF, 25 KB

english, 2012

111

Mature Microsatellites: Mechanisms Underlying Dinucleotide Microsatellite Mutational Biases in Human Cells

Baptiste, B. A., Ananda, G., Strubczewski, N., Lutzkanin, A., Khoo, S. J., Srikanth, A., Kim, N., Makova, K. D., Krasilnikova, M. M., Eckert, K. A.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.54 MB

english, 2013

112

Strong Purifying Selection at Genes Escaping X Chromosome Inactivation

Park, C., Carrel, L., Makova, K. D.

Journal:

Molecular Biology and Evolution

Year:

2010

Language:

english

File:

PDF, 248 KB

english, 2010

113

Effects of borneol on blood chemistry changes in chickens

Zita, Faixova, Elena, Piesova, Zuzana, Makova, Jana, Takacova, Klaudia, Cobanova, L., Leng, S., Faix

Journal:

Acta veterinaria

Year:

2009

Language:

english

File:

PDF, 57 KB

english, 2009

114

Microsatellite Interruptions Stabilize Primate Genomes and Exist as Population-Specific Single Nucleotide Polymorphisms within Individual Human Genomes

Ananda, Guruprasad, Hile, Suzanne E., Breski, Amanda, Wang, Yanli, Kelkar, Yogeshwar, Makova, Kateryna D., Eckert, Kristin A., Gojobori, Takashi

Journal:

Year:

2014

Language:

english

File:

PDF, 1.78 MB

english, 2014

115

Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosome

Carrel, Laura, Park, Chungoo, Tyekucheva, Svitlana, Dunn, John, Chiaromonte, Francesca, Makova, Kateryna D.

Journal:

Year:

2006

Language:

english

File:

PDF, 582 KB

english, 2006

116

Oscillating Evolution of a Mammalian Locus with Overlapping Reading Frames: An XLαs/ALEX Relay

Nekrutenko, Anton, Wadhawan, Samir, Goetting-Minesky, Paula, Makova, Kateryna D.

Journal:

Year:

2005

Language:

english

File:

PDF, 396 KB

english, 2005

117

Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions

Kvikstad, E. M., Chiaromonte, F., Makova, K. D.

Journal:

Genome Research

Year:

2009

Language:

english

File:

PDF, 588 KB

english, 2009

118

A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms

Kvikstad, Erika M., Tyekucheva, Svitlana, Chiaromonte, Francesca, Makova, Kateryna D.

Journal:

PLoS Computational Biology

Year:

2007

Language:

english

File:

PDF, 875 KB

english, 2007

119

Rescuing Alu: Recovery of New Inserts Shows LINE-1 Preserves Alu Activity through A-Tail Expansion

Wagstaff, Bradley J., Hedges, Dale J., Derbes, Rebecca S., Campos Sanchez, Rebeca, Chiaromonte, Francesca, Makova, Kateryna D., Roy-Engel, Astrid M., Malik, Harmit S.

Journal:

Year:

2012

Language:

english

File:

PDF, 925 KB

english, 2012

120

What Is a Microsatellite: A Computational and Experimental Definition Based upon Repeat Mutational Behavior at A/T and GT/AC Repeats

Kelkar, Y. D., Strubczewski, N., Hile, S. E., Chiaromonte, F., Eckert, K. A., Makova, K. D.

Journal:

Genome Biology and Evolution

Year:

2010

Language:

english

File:

PDF, 1.32 MB

english, 2010

121

DO VARIATIONS IN SUBSTITUTION RATES AND MALE MUTATION BIAS CORRELATE WITH LIFE-HISTORY TRAITS? A STUDY OF 32 MAMMALIAN GENOMES

Melissa A. Wilson Sayres, Chris Venditti, Mark Pagel and Kateryna D. Makova

Journal:

Year:

2011

Language:

english

File:

PDF, 1.91 MB

english, 2011

122

Episodic Evolution of Growth Hormone in Primates and Emergence of the Species Specificity of Human Growth Hormone Receptor

Liu, J.-C., Makova, K. D., Adkins, R. M., Gibson, S., Li, W.-H.

Journal:

Molecular Biology and Evolution

Year:

2001

Language:

english

File:

PDF, 108 KB

english, 2001

123

A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly

Blankenberg, D., Taylor, J., Schenck, I., He, J., Zhang, Y., Ghent, M., Veeraraghavan, N., Albert, I., Miller, W., Makova, K. D., Hardison, R. C., Nekrutenko, A.

Journal:

Genome Research

Year:

2007

Language:

english

File:

PDF, 612 KB

english, 2007

124

Cilia have Multiple Roles in the Development of the Vertebrate Left-Right Axis

Brueckner, M, McGrath, J, Makova, S

Journal:

Microscopy and Microanalysis

Year:

2008

Language:

english

File:

PDF, 119 KB

english, 2008

125

New Organic Metals ET 2 [Hg(SCN)Cl 2 ] and ET 2 [Hg(SCN) 2 Cl]

Aldoshina, M. Z., Lyubovskaya, R. N., Konovalikhin, S. V., Dyachenko, O. A., Makova, M. K., Lyubovskii, R. B.

Journal:

Molecular Crystals and Liquid Crystals Science and Technology Section A Molecular Crystals and Liquid Crystals

Year:

1993

Language:

english

File:

PDF, 392 KB

english, 1993

126

A Massively Parallel Sequencing Approach Uncovers Ancient Origins and High Genetic Variability of Endangered Przewalski's Horses

Goto, H., Ryder, O. A., Fisher, A. R., Schultz, B., Kosakovsky Pond, S. L., Nekrutenko, A., Makova, K. D.

Journal:

Genome Biology and Evolution

Year:

2011

Language:

english

File:

PDF, 516 KB

english, 2011

127

Artifactual mutations resulting from DNA lesions limit detection levels in ultrasensitive sequencing applications

Arbeithuber, Barbara, Makova, Kateryna D., Tiemann-Boege, Irene

Journal:

Year:

2016

Language:

english

File:

PDF, 662 KB

english, 2016

128

Reverse Transcription Errors and RNA-DNA Differences at Short Tandem Repeats

Fungtammasan, Arkarachai, Tomaszkiewicz, Marta, Campos-Sanchez, Rebeca, Eckert, Kristin, DeGiorgio, Michael, Makova, Kateryna D.

Journal:

Molecular Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

129

Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?

Fungtammasan, Arkarachai, Walsh, Erin, Chiaromonte, Francesca, Eckert, Kristin A., Makova, Kateryna D.

Journal:

Genome Research

Year:

2016

Language:

english

File:

PDF, 75 KB

english, 2016

130

Insulin-like growth factor binding protein (IGFBP)-1 could through its RGD domain improve glucose regulation and insulin sensitivity

Haywood, Natalie J, Cordell, Paul A, Tang, Kar Yeun, Makova, Natallia, Yuldasheva, Nadira Y, Imrie, Helen, Viswambharan, Hema, Bruns, Alexander F, Cubbon, Richard M, Kearney, Mark T, Wheatcroft, Steph

Journal:

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

131

Selective Enhancement of Insulin Sensitivity in the Endothelium In Vivo Reveals a Novel Proatherosclerotic Signaling LoopNovelty and Significance

Viswambharan, Hema, Yuldasheva, Nadira Y., Sengupta, Anshuman, Imrie, Helen, Gage, Matthew C., Haywood, Natalie, Walker, Andrew M.N., Skromna, Anna, Makova, Natallia, Galloway, Stacey, Shah, Pooja, Su

Journal:

Circulation Research

Year:

2017

Language:

english

File:

PDF, 2.18 MB

english, 2017

132

Streamlined analysis of duplex sequencing data with Du Novo

Stoler, Nicholas, Arbeithuber, Barbara, Guiblet, Wilfried, Makova, Kateryna D., Nekrutenko, Anton

Journal:

Year:

2016

Language:

english

File:

PDF, 1.43 MB

english, 2016

133

Y and W Chromosome Assemblies: Approaches and Discoveries

Tomaszkiewicz, Marta, Medvedev, Paul, Makova, Kateryna D.

Journal:

Trends in Genetics

Year:

2017

Language:

english

File:

PDF, 2.47 MB

english, 2017

134

Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent

Baker, Robert J., Dickins, Benjamin, Wickliffe, Jeffrey K., Khan, Faisal Anwarali, Gaschak, Sergey, Makova, Kateryna, Phillips, Caleb D.

Journal:

Evolutionary Applications

Year:

2017

Language:

english

File:

PDF, 194 KB

english, 2017

135

RecoverY: k-mer-based read classification for Y-chromosome-specific sequencing and assembly

Rangavittal, Samarth, Harris, Robert S, Cechova, Monika, Tomaszkiewicz, Marta, Chikhi, Rayan, Makova, Kateryna D, Medvedev, Paul

Journal:

Year:

2017

Language:

english

File:

PDF, 416 KB

english, 2017

136

A Population Phylogenetic View of Mitochondrial Heteroplasmy

Wilton, Peter R., Zaidi, Arslan, Makova, Kateryna, Nielsen, Rasmus

Journal:

Year:

2018

Language:

english

File:

PDF, 1.39 MB

english, 2018

137

Intestinal Mucus Layer and Mucins (A Review)

Tarabova, L., Makova, Z., Piesova, E., Szaboova, R., Faixova, Z.

Journal:

Folia Veterinaria

Year:

2016

Language:

english

File:

PDF, 1.42 MB

english, 2016

138

IWTomics: testing high-resolution sequence-based “Omics” data at multiple locations and scales

Cremona, Marzia A, Pini, Alessia, Cumbo, Fabio, Makova, Kateryna D, Chiaromonte, Francesca, Vantini, Simone, Birol, Inanc

Journal:

Year:

2018

Language:

english

File:

PDF, 335 KB

english, 2018

139

ChemInform Abstract: THE STUDY OF MOLECULAR MOTIONS IN SUBSTITUTED FERROCENES BY MEANS OF NMR SPECTROSCOPY

MAKOVA, M. K., LEONOVA, E. V., KARIMOV, YU. S., KOCHETKOVA, N. S.

Journal:

Chemischer Informationsdienst

Year:

1973

File:

PDF, 108 KB

1973

140

High levels of copy number variation of ampliconic genes across major human Y haplogroups

Ye, Danling, Zaidi, Arslan, Tomaszkiewicz, Marta, Anthony, Kate, Liebowitz, Corey, DeGiorgio, Michael, Shriver, Mark D, Makova, Kateryna D

Journal:

Genome Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 2.24 MB

english, 2018

141

ENDOTHELIAL-SPECIFIC OVEREXPRESSION OF MUTATED INSULIN-LIKE GROWTH FACTOR-1 RECEPTORS (IGF-1R) ENHANCES ENDOTHELIAL INSULIN SENSITIVITY AND VASCULAR HYDROGEN PEROXIDE GENERATION

Shah, P, Viswambharan, H, Gatenby, VK, Imrie, H, Haywood, N, Galloway, S, Sengupta, A, Cubbon, RM, Gage, M, Skromna, A, Makova, N, Grant, P, Yuldasheva, N, Beech, DJ, Wheatcroft, SB, Kearney, MT

Journal:

Year:

2014

Language:

english

File:

PDF, 31 KB

english, 2014

142

ChemInform Abstract: STUDY OF THE KINETICS OF ACID DECOMPOSITION OF M- AND P-DIISOPROPYLBENZENE HYDROPEROXIDES IN THE PRESENCE OF THE MACROPOROUS CATION EXCHANGER KU 23

POKROVSKAYA, I. E., FIL'MAKOVA, L. A., ELYASHBERG, M. E., KARASEV, YU. Z., SINOVICH, I. D., ALESKOVSKAYA, T. N., SHMAKOVA, I. B.

Journal:

Chemischer Informationsdienst

Year:

1976

File:

PDF, 100 KB

1976

143

Evolution and Survival on Eutherian Sex Chromosomes

Wilson, Melissa A., Makova, Kateryna D., Gojobori, Takashi

Journal:

Year:

2009

Language:

english

File:

PDF, 374 KB

english, 2009

144

Molecular Properties of Lysine Dendrimers and their Interactions with Aβ-Peptides and Neuronal Cells

Neelov, I.M., Janaszewska, A., Klajnert, B., Bryszewska, M., Makova, N.Z., Hicks, D., Pearson, H.A., Vlasov, G.P., Ilyash, M.Yu., Vasilev, D.S., Dubrovskaya, N.M., Tumanova, N.L., Zhuravin, I.A., Turn

Journal:

Current Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 721 KB

english, 2012

145

Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate

Guiblet, Wilfried, Cremona, Marzia, Cechova, Monika, Harris, Robert, Kejnovska, Iva, Kejnovsky, Eduard, Eckert, Kristin A., Chiaromonte, Francesca, Makova, Kateryna D

Journal:

Genome Research

Year:

2018

Language:

english

File:

PDF, 2.23 MB

english, 2018

146

Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon

Sahlin, Kristoffer, Tomaszkiewicz, Marta, Makova, Kateryna D., Medvedev, Paul

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.07 MB

english, 2018

147

Correcting palindromes in long reads after whole-genome amplification

Warris, Sven, Schijlen, Elio, van de Geest, Henri, Vegesna, Rahulsimham, Hesselink, Thamara, te Lintel Hekkert, Bas, Sanchez Perez, Gabino, Medvedev, Paul, Makova, Kateryna D., de Ridder, Dick

Journal:

Year:

2018

Language:

english

File:

PDF, 1.13 MB

english, 2018

148

Controlling for contamination in re-sequencing studies with a reproducible web-based phylogenetic approach

Dickins, Benjamin, Rebolledo-Jaramillo, Boris, Su, Marcia Shu-Wei, Paul, Ian M., Blankenberg, Daniel, Stoler, Nicholas, Makova, Kateryna D., Nekrutenko, Anton

Journal:

Year:

2014

Language:

english

File:

PDF, 2.62 MB

english, 2014

149

Functional data analysis for computational biology

Cremona, Marzia, Xu, Hongyan, Makova, Kateryna, Reimherr, Matthew, Chiaromonte, Francesca, Madrigal, Pedro, Kelso, Janet

Journal:

Year:

2019

File:

PDF, 302 KB

2019

150

Use of MALDI-TOF mass spectrometry in rapid identification of Beauveria bassiana and Beauveria pseudobassiana

HRICÁKOVÁ, Nikola, MEDO, Juraj, HLEBA, Lukáš, BARTA, Marek, MAKOVÁ, Jana

Journal:

Journal of Central European Agriculture

Year:

2018

File:

PDF, 478 KB

2018