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51

A Second Mammalian Antizyme: Conservation of Programmed Ribosomal Frameshifting

Ivaylo P. Ivanov, Raymond F. Gesteland, John F. Atkins

Journal:

Year:

1998

Language:

english

File:

PDF, 1.49 MB

english, 1998

52

Escherichia coli mRNAs with strong Shine/Dalgarno sequences also contain 5′ end sequences complementary to domain # 17 on the 16S ribosomal RNA

Ashkan Golshani, Nevan J. Krogan, John Xu, Marek Pacal, Xiao-Chum Yang, Ivaylo Ivanov, Miguel A. Providenti, M.Clelia Ganoza, Ivan G. Ivanov, Mounir G. AbouHaidar

Journal:

Biochemical and Biophysical Research Communications

Year:

2004

Language:

english

File:

PDF, 1.26 MB

english, 2004

53

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

Ivaylo I. Ivanov, Koji Atarashi, Nicolas Manel, Eoin L. Brodie, Tatsuichiro Shima, Ulas Karaoz, Dongguang Wei, Katherine C. Goldfarb, Clark A. Santee, Susan V. Lynch, Takeshi Tanoue, Akemi Imaoka, Kik

Journal:

Year:

2009

Language:

english

File:

PDF, 2.13 MB

english, 2009

54

Specific Microbiota Direct the Differentiation of IL-17-Producing T-Helper Cells in the Mucosa of the Small Intestine

Ivaylo I. Ivanov, Rosa de Llanos Frutos, Nicolas Manel, Keiji Yoshinaga, Daniel B. Rifkin, R. Balfour Sartor, B. Brett Finlay, Dan R. Littman

Journal:

Cell Host & Microbe

Year:

2008

Language:

english

File:

PDF, 2.31 MB

english, 2008

55

The Genome of Th17 Cell-Inducing Segmented Filamentous Bacteria Reveals Extensive Auxotrophy and Adaptations to the Intestinal Environment

Andrew Sczesnak, Nicola Segata, Xiang Qin, Dirk Gevers, Joseph F. Petrosino, Curtis Huttenhower, Dan R. Littman, Ivaylo I. Ivanov

Journal:

Cell Host & Microbe

Year:

2011

Language:

english

File:

PDF, 2.36 MB

english, 2011

56

176 IL-6 Programs TH-17 Cell Differentiation by Promoting the Sequential Engagement of the IL-21 and IL-23 Pathways

Liang Zhou, Ivaylo I. Ivanov, Rosanne Spolski, Roy Min, Kevin Shenderov, Takeshi Egawa, David E. Levy, Warren J. Leonard, Dan R. Littman

Journal:

Year:

2007

Language:

english

File:

PDF, 44 KB

english, 2007

57

Novel antizyme gene in Danio rerio expressed in brain and retina

Ivaylo P. Ivanov, Andrew J. Pittman, Chi-Bin Chien, Raymond F. Gesteland, John F. Atkins

Journal:

Year:

2007

Language:

english

File:

PDF, 907 KB

english, 2007

58

Phylogenetic shadowing of a histamine-gated chloride channel involved in insect vision

Mladen Iovchev, Alexander Boutanaev, Ivaylo Ivanov, Adrian Wolstenholme, Dmitry Nurminsky, Eugene Semenov

Journal:

Insect Biochemistry and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 296 KB

english, 2006

59

Requirement for Lymphoid Tissue-Inducer Cells in Isolated Follicle Formation and T Cell-Independent Immunoglobulin A Generation in the Gut

Masayuki Tsuji, Keiichiro Suzuki, Hiroshi Kitamura, Mikako Maruya, Kazuo Kinoshita, Ivaylo I. Ivanov, Kikuji Itoh, Dan R. Littman, Sidonia Fagarasan

Journal:

Year:

2008

Language:

english

File:

PDF, 2.25 MB

english, 2008

60

Notch2 Receptor Signaling Controls Functional Differentiation of Dendritic Cells in the Spleen and Intestine

Kanako L. Lewis, Michele L. Caton, Milena Bogunovic, Melanie Greter, Lucja T. Grajkowska, Dennis Ng, Apostolos Klinakis, Israel F. Charo, Steffen Jung, Jennifer L. Gommerman, Ivaylo I. Ivanov, Kang Li

Journal:

Year:

2011

Language:

english

File:

PDF, 1.39 MB

english, 2011

61

Identification of a New Antizyme mRNA +1 Frameshifting Stimulatory Pseudoknot in a Subset of Diverse Invertebrates and its Apparent Absence in Intermediate Species

Ivaylo P Ivanov, Christine B Anderson, Raymond F Gesteland, John F Atkins

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 2.29 MB

english, 2004

62

Modulation of immune homeostasis by commensal bacteria

Ivaylo I Ivanov, Dan R Littman

Journal:

Current Opinion in Microbiology

Year:

2011

Language:

english

File:

PDF, 544 KB

english, 2011

63

Transcriptional regulation of Th17 cell differentiation

Ivaylo I. Ivanov, Liang Zhou, Dan R. Littman

Journal:

Seminars in Immunology

Year:

2007

Language:

english

File:

PDF, 885 KB

english, 2007

64

Comparison of the activity levels and localization of dipeptidyl peptidase IV in normal and tumor human lung cells

Mashenka Dimitrova, Ivaylo Ivanov, Ralitza Todorova, Nadezhda Stefanova, Veselina Moskova-Doumanova, Tanya Topouzova-Hristova, Veselina Saynova, Elena Stephanova

Journal:

Tissue and Cell

Year:

2012

Language:

english

File:

PDF, 1.30 MB

english, 2012

65

Comparison of the INDO band structures of polyacetylene, polythiophene, polyfuran, and polypyrrole

Ivaylo Ivanov, Benjamin F Gherman, David Yaron

Journal:

Synthetic Metals

Year:

2001

Language:

english

File:

PDF, 185 KB

english, 2001

66

Deprotonation of a Histidine Residue in Aqueous Solution Using Constrained Ab Initio Molecular Dynamics

Ivanov, Ivaylo, Klein, Michael L.

Journal:

Journal of the American Chemical Society

Year:

2002

Language:

english

File:

PDF, 101 KB

english, 2002

67

Synthesis, structural analysis and application of a series of solid-state fluorochromes—aryl hydrazones of 4-hydrazino-N-hexyl-1,8-naphthalimide

Ivaylo P. Ivanov, Mashenka B. Dimitrova, Donka N. Tasheva, Diana V. Cheshmedzhieva, Valentin S. Lozanov, Sonia V. Ilieva

Journal:

Year:

2013

Language:

english

File:

PDF, 1.07 MB

english, 2013

68

Enzyme cofactors: Double-edged sword for catalysis

Journal:

Nature Chemistry

Year:

2012

Language:

english

File:

PDF, 554 KB

english, 2012

69

Intestinal Commensal Microbes as Immune Modulators

Ivaylo I. Ivanov, Kenya Honda

Journal:

Cell Host & Microbe

Year:

2012

Language:

english

File:

PDF, 537 KB

english, 2012

70

Screening the SPO11 and EIF5A2 genes in a population of infertile men

Greg L. Christensen, Ivaylo P. Ivanov, John F. Atkins, Anna Mielnik, Peter N. Schlegel, Douglas T. Carrell

Journal:

Fertility and Sterility

Year:

2005

Language:

english

File:

PDF, 68 KB

english, 2005

71

Molecular-Dynamics Simulations of ELIC—a Prokaryotic Homologue of the Nicotinic Acetylcholine Receptor

Cheng, Xiaolin, Ivanov, Ivaylo, Wang, Hailong, Sine, Steven M., McCammon, J. Andrew

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 1.45 MB

english, 2009

72

Ion Selectivity Mechanism in a Bacterial Pentameric Ligand-Gated Ion Channel

Fritsch, Sebastian, Ivanov, Ivaylo, Wang, Hailong, Cheng, Xiaolin

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 1011 KB

english, 2011

73

Detection of a novel mutation in the testis-specific antizyme-3 gene

Greg Christensen, Ivaylo Ivanov, John Atkins, Peter Schlegel, Anna Mielnik, Douglas Carrell

Journal:

Fertility and Sterility

Year:

2002

Language:

english

File:

PDF, 56 KB

english, 2002

74

Screening of the SPO11 and EIF5A2 genes in a population of azoospermic and severely oligozoospermic men

Greg L. Christensen, Ivaylo P. Ivanov, John F. Atkins, Peter Schlegel, Anna Mielnik, Douglas T. Carrell

Journal:

Fertility and Sterility

Year:

2003

Language:

english

File:

PDF, 30 KB

english, 2003

75

RORγ-Expressing Th17 Cells Induce Murine Chronic Intestinal Inflammation via Redundant Effects of IL-17A and IL-17F

Moritz Leppkes, Christoph Becker, Ivaylo I. Ivanov, Sebastian Hirth, Stefan Wirtz, Clemens Neufert, Sandrine Pouly, Andrew J. Murphy, David M. Valenzuela, George D. Yancopoulos, Burkhard Becher, Dan R

Journal:

Gastroenterology

Year:

2009

Language:

english

File:

PDF, 2.16 MB

english, 2009

76

Nanosecond-Timescale Conformational Dynamics of the Human α7 Nicotinic Acetylcholine Receptor

Cheng, Xiaolin, Ivanov, Ivaylo, Wang, Hailong, Sine, Steven M., McCammon, J. Andrew

Journal:

Biophysical Journal

Year:

2007

Language:

english

File:

PDF, 1.30 MB

english, 2007

77

Dynamics of the Acetylcholinesterase Tetramer

Gorfe, Alemayehu A., Chang, Chia-en A., Ivanov, Ivaylo, McCammon, J. Andrew

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 1.72 MB

english, 2008

78

Synthesis and Electrophilic Cyclization Reactions of Diphenyl 3-Methylpenta-1,2,4-trienyl Phosphine Oxide

Ivanov, Ivaylo K., Christov, Valerij C.

Journal:

Synthetic Communications

Year:

2013

Language:

english

File:

PDF, 325 KB

english, 2013

79

Transmembrane Peptide-Induced Lipid Sorting and Mechanism of Lα-to-Inverted Phase Transition Using Coarse-Grain Molecular Dynamics

Nielsen, Steve O., Lopez, Carlos F., Ivanov, Ivaylo, Moore, Preston B., Shelley, John C., Klein, Michael L.

Journal:

Biophysical Journal

Year:

2004

Language:

english

File:

PDF, 532 KB

english, 2004

80

Intestinal epithelial cells as mediators of the commensal–host immune crosstalk

Goto, Yoshiyuki, Ivanov, Ivaylo I

Journal:

Immunology & Cell Biology

Year:

2013

Language:

english

File:

PDF, 1.31 MB

english, 2013

81

Microbe-dependent CD11b+ IgA+ plasma cells mediate robust early-phase intestinal IgA responses in mice

Kunisawa, Jun, Gohda, Masashi, Hashimoto, Eri, Ishikawa, Izumi, Higuchi, Morio, Suzuki, Yuji, Goto, Yoshiyuki, Panea, Casandra, Ivanov, Ivaylo I., Sumiya, Risa, Aayam, Lamichhane, Wake, Taichi, Tajiri

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

82

Acquisition of a multifunctional IgA+ plasma cell phenotype in the gut

Fritz, Jörg H., Rojas, Olga Lucia, Simard, Nathalie, McCarthy, Douglas D., Hapfelmeier, Siegfried, Rubino, Stephen, Robertson, Susan J., Larijani, Mani, Gosselin, Jean, Ivanov, Ivaylo I., Martin, Albe

Journal:

Year:

2011

Language:

english

File:

PDF, 1.51 MB

english, 2011

83

Experimental and theoretical study on the absorption and fluorescence properties of substituted aryl hydrazones of 1,8-naphthalimide

Cheshmedzhieva, Diana, Ivanova, Plamena, Stoyanov, Stanimir, Tasheva, Donka, Dimitrova, Mashenka, Ivanov, Ivaylo, Ilieva, Sonia

Journal:

Physical Chemistry Chemical Physics

Year:

2011

Language:

english

File:

PDF, 1.68 MB

english, 2011

84

Characterization of Nonbiological Antimicrobial Polymers in Aqueous Solution and at Water−Lipid Interfaces from All-Atom Molecular Dynamics

Ivanov, Ivaylo, Vemparala, Satyavani, Pophristic, Vojislava, Kuroda, Kenichi, DeGrado, William F., McCammon, J. Andrew, Klein, Michael L.

Journal:

Journal of the American Chemical Society

Year:

2006

Language:

english

File:

PDF, 227 KB

english, 2006

85

Characterizing Loop Dynamics and Ligand Recognition in Human- and Avian-Type Influenza Neuraminidases via Generalized Born Molecular Dynamics and End-Point Free Energy Calculations

Amaro, Rommie E., Cheng, Xiaolin, Ivanov, Ivaylo, Xu, Dong, McCammon, J. Andrew

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 1.22 MB

english, 2009

86

Bifunctionalized Allenes, Part IX: An Efficient Method for Regioselective Synthesis of 4-Heteroatom-Functionalized Allenecarboxylates

Ivanov, Ivaylo K., Parushev, Ivaylo D., Christov, Valerij Ch.

Journal:

Heteroatom Chemistry

Year:

2013

Language:

english

File:

PDF, 622 KB

english, 2013

87

Segmented Filamentous Bacteria Antigens Presented by Intestinal Dendritic Cells Drive Mucosal Th17 Cell Differentiation

Goto, Yoshiyuki, Panea, Casandra, Nakato, Gaku, Cebula, Anna, Lee, Carolyn, Diez, Marta Galan, Laufer, Terri M., Ignatowicz, Leszek, Ivanov, Ivaylo I.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.86 MB

english, 2014

88

S1701 A Crucial Role of Rorgamma Expressing TH17 Cells in Chronic Intestinal Inflammation

Leppkes, Moritz, Becker, Christoph, Wirtz, Stefan J., Ivanov, Ivaylo I., Neufert, Clemens, Murphy, Andrew J., Valenzuela, David, Yancopoulos, George, Nesbitt, Erin, Galle, Peter R., Littman, Dan R., N

Journal:

Gastroenterology

Year:

2008

Language:

english

File:

PDF, 52 KB

english, 2008

89

Structurally Distinct Complexes of Ubiquitin and Sumo-Modified PCNA Lead to Distinct DNA Damage Response Pathways

Tsutakawa, Susan, Yan, Chunli, Xu, Xiaojun, Freudenthal, Bret, Weinacht, Christopher, Zhuang, Zhihao, Washington, Todd, Ivanov, Ivaylo

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 104 KB

english, 2014

90

Defining the Superfamily Conserved Mechanism for Flap Endonucleases FEN1 and XPG Specificity for 5' Flap DNA and DNA Bubbles, Respectively, by Hybrids Methods of Crystallography, SAXS, EM, and Computation

Tsutakawa, Susan, Arvai, Andrew, Sarker, Altaf, Querol-Audi, Jordi, Finger, David, Nogales, Eva, Ivanov, Ivaylo, Cooper, Priscilla, Grasby, Jane, Tainer, John

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 47 KB

english, 2014

91

Multiscale Modeling of PCNA - Ubiquitin Interactions

Ivanov, Ivaylo, Van Wynsberghe, Adam, Tainer, John A., McCammon, J. Andrew

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 89 KB

english, 2010

92

Diamidine Compounds for Selective Inhibition of Protein Arginine Methyltransferase 1

Yan, Leilei, Yan, Chunli, Qian, Kun, Su, Hairui, Kofsky-Wofford, Stephanie A., Lee, Wei-Chao, Zhao, Xinyang, Ho, Meng-Chiao, Ivanov, Ivaylo, Zheng, Yujun George

Journal:

Journal of Medicinal Chemistry

Year:

2014

Language:

english

File:

PDF, 3.37 MB

english, 2014

93

Chip-Based Nanostructured Sensors Enable Accurate Identification and Classification of Circulating Tumor Cells in Prostate Cancer Patient Blood Samples

Ivanov, Ivaylo, Stojcic, Jessica, Stanimirovic, Aleksandra, Sargent, Edward, Nam, Robert K., Kelley, Shana O.

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 1.42 MB

english, 2013

94

Barriers to Ion Translocation in Cationic and Anionic Receptors from the Cys-Loop Family

Ivanov, Ivaylo, Cheng, Xiaolin, Sine, Steven M., McCammon, J. Andrew

Journal:

Journal of the American Chemical Society

Year:

2007

Language:

english

File:

PDF, 563 KB

english, 2007

95

Bifunctionalized Allenes, Part XI: Competitive Electrophilic Cyclization and Addition Reactions of 4-Phosphorylated Allenecarboxylates

Ivanov, Ivaylo K., Parushev, Ivaylo D., Christov, Valerij Ch.

Journal:

Heteroatom Chemistry

Year:

2014

Language:

english

File:

PDF, 248 KB

english, 2014

96

First-Principles Study of Aqueous Hydroxide Solutions

Chen, Bin, Park, Jung Mee, Ivanov, Ivaylo, Tabacchi, Gloria, Klein, Michael L., Parrinello, Michele

Journal:

Journal of the American Chemical Society

Year:

2002

Language:

english

File:

PDF, 39 KB

english, 2002

97

Controlling the Shape and Flexibility of Arylamides: A Combined ab Initio, ab Initio Molecular Dynamics, and Classical Molecular Dynamics Study †

Pophristic, Vojislava, Vemparala, Satyavani, Ivanov, Ivaylo, Liu, Zhiwei, Klein, Michael L., DeGrado, William F.

Journal:

Journal of Physical Chemistry B

Year:

2006

Language:

english

File:

PDF, 406 KB

english, 2006

98

Relative p K a Values from First-Principles Molecular Dynamics: The Case of Histidine Deprotonation

Ivanov, Ivaylo, Chen, Bin, Raugei, Simone, Klein, Michael L.

Journal:

Journal of Physical Chemistry B

Year:

2006

Language:

english

File:

PDF, 583 KB

english, 2006

99

Nonlinear absorption properties of the charge states of nitrogen-vacancy centers in nanodiamonds

Ivanov, Ivaylo P., Li, Xiangping, Dolan, Philip R., Gu, Min

Journal:

Year:

2013

Language:

english

File:

PDF, 359 KB

english, 2013

100

Dynamical Flexibility and Proton Transfer in the Arginase Active Site Probed by ab Initio Molecular Dynamics

Ivanov, Ivaylo, Klein, Michael L.

Journal:

Journal of the American Chemical Society

Year:

2005

Language:

english

File:

PDF, 694 KB

english, 2005

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