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1

The FlowVizMenu and Parallel Scatterplot Matrix: Hybrid Multidimensional Visualizations for Network Exploration

Viau, C., McGuffin, M.J., Chiricota, Y., Jurisica, I.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2010

Language:

english

File:

PDF, 1.77 MB

english, 2010

2

Case-based reasoning in IVF: prediction and knowledge mining

Igor Jurisica, John Mylopoulos, Janice Glasgow, Heather Shapiro, Robert F Casper

Journal:

Artificial Intelligence in Medicine

Year:

1998

Language:

english

File:

PDF, 545 KB

english, 1998

3

[Lecture Notes in Computer Science] Interactive Knowledge Discovery and Data Mining in Biomedical Informatics Volume 8401 ||

Holzinger, Andreas, Jurisica, Igor

Year:

2014

Language:

english

File:

PDF, 12.25 MB

english, 2014

4

Path Planning with Modified a Star Algorithm for a Mobile Robot

Duchoň, František, Babinec, Andrej, Kajan, Martin, Beňo, Peter, Florek, Martin, Fico, Tomáš, Jurišica, Ladislav

Journal:

Procedia Engineering

Year:

2014

Language:

english

File:

PDF, 766 KB

english, 2014

5

Isolation of Single Human Hematopoietic Stem Cells Capable of Long-Term Multilineage Engraftment

Notta, F., Doulatov, S., Laurenti, E., Poeppl, A., Jurisica, I., Dick, J. E.

Journal:

Year:

2011

Language:

english

File:

PDF, 874 KB

english, 2011

6

A comprehensive catalogue of functional genetic variations in the EGFR pathway: Protein–protein interaction analysis reveals novel genes and polymorphisms important for cancer research

Sevtap Savas, Joseph Geraci, Igor Jurisica, Geoffrey Liu

Journal:

International Journal of Cancer

Year:

2009

Language:

english

File:

PDF, 640 KB

english, 2009

7

[Lecture Notes in Computer Science] Interactive Knowledge Discovery and Data Mining in Biomedical Informatics Volume 8401 || Adapted Features and Instance Selection for Improving Co-training

Holzinger, Andreas, Jurisica, Igor

Year:

2014

Language:

english

File:

PDF, 641 KB

english, 2014

8

Advances in ovarian cancer proteomics: the quest for biomarkers and improved therapeutic interventions

Jurisicova, Andrea, Jurisica, Igor, Kislinger, Thomas

Journal:

Expert Review of Proteomics

Year:

2008

Language:

english

File:

PDF, 268 KB

english, 2008

9

Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions

Sivade, M., Alonso-López, D., Ammari, M., Bradley, G., Campbell, N. H., Ceol, A., Cesareni, G., Combe, C., De Las Rivas, J., del-Toro, N., Heimbach, J., Hermjakob, H., Jurisica, I., Koch, M., Licata,

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.21 MB

english, 2018

10

Systematic Knowledge Management and Knowledge Discovery

Journal:

Bulletin of the American Society for Information Science and Technology

Year:

2000

File:

PDF, 1009 KB

2000

11

Robust global micro-RNA profiling with formalin-fixed paraffin-embedded breast cancer tissues

Hui, Angela B Y, Shi, Wei, Boutros, Paul C, Miller, Naomi, Pintilie, Melania, Fyles, Tony, McCready, David, Wong, Derek, Gerster, Kate, Jurisica, Igor

Journal:

Laboratory Investigation

Year:

2009

File:

PDF, 40 KB

2009

12

Differentially androgen-modulated genes in ovarian epithelial cells from BRCA mutation carriers and control patients predict ovarian cancer survival and disease progression

Motamed-Khorasani, A, Jurisica, I, Letarte, M, Shaw, P A, Parkes, R K, Zhang, X, Evangelou, A, Rosen, B, Murphy, K J, Brown, T J

Journal:

Year:

2006

Language:

english

File:

PDF, 834 KB

english, 2006

13

Impaired tRNA Nuclear Export Links DNA Damage and Cell-Cycle Checkpoint

Ata Ghavidel, Thomas Kislinger, Oxana Pogoutse, Richelle Sopko, Igor Jurisica, Andrew Emili

Journal:

Year:

2007

Language:

english

File:

PDF, 1.04 MB

english, 2007

14

[Lecture Notes in Computer Science] Data Integration in the Life Sciences Volume 7970 ||

Baker, Christopher J. O., Butler, Greg, Jurisica, Igor

Year:

2013

Language:

english

File:

PDF, 9.18 MB

english, 2013

15

[Lecture Notes in Computer Science] Interactive Knowledge Discovery and Data Mining in Biomedical Informatics Volume 8401 || Knowledge Discovery and Data Mining in Biomedical Informatics: The Future Is in Integrative, Interactive Machine Learning Solutions

Holzinger, Andreas, Jurisica, Igor

Year:

2014

Language:

english

File:

PDF, 385 KB

english, 2014

16

ReducedBRCA1transcript levels in freshly isolated blood leukocytes fromBRCA1mutation carriers is mutation specific

Chehade, Rania, Pettapiece-Phillips, Rachael, Salmena, Leonardo, Kotlyar, Max, Jurisica, Igor, Narod, Steven A., Akbari, Mohammad R., Kotsopoulos, Joanne

Journal:

Breast Cancer Research

Year:

2016

Language:

english

File:

PDF, 1.42 MB

english, 2016

17

P3.01-051 Analysis of Molecular Aberrations Associated with COPD in Patients with Lung Cancer

Tokar, Tomas, Vucic, Emily, Pastrello, Chiara, Lam, Wan, Jurisica, Igor

Journal:

Journal of Thoracic Oncology

Year:

2017

Language:

english

File:

PDF, 166 KB

english, 2017

18

mirDIP 4.1—integrative database of human microRNA target predictions

Tokar, Tomas, Pastrello, Chiara, Rossos, Andrea E M, Abovsky, Mark, Hauschild, Anne-Christin, Tsay, Mike, Lu, Richard, Jurisica, Igor

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 281 KB

english, 2018

19

In-Depth Proteomics of Ovarian Cancer Ascites: Combining Shotgun Proteomics and Selected Reaction Monitoring Mass Spectrometry

Elschenbroich, Sarah, Ignatchenko, Vladimir, Clarke, Blaise, Kalloger, Steve E., Boutros, Paul C., Gramolini, Anthony O., Shaw, Patricia, Jurisica, Igor, Kislinger, Thomas

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 1.56 MB

english, 2011

20

P-152 Evaluation of novel prognostic markers detected by cDNA microarray in stage I–III non-small cell lung cancer by real-time RT-PCR

Blackhall, Fiona H., Wigle, D., Pintilie, M., Jurisica, I., Liu, N., Johnston, M., Darling, G., Keshavjee, S., Winton, T., Shepherd, F.A., Tsao, M.S.

Journal:

Year:

2003

Language:

english

File:

PDF, 186 KB

english, 2003

21

Primary Tumor Xenografts of Human Lung Adeno and Squamous Cell Carcinoma Express Distinct Proteomic Signatures

Wei, Yuhong, Tong, Jiefei, Taylor, Paul, Strumpf, Dan, Ignatchenko, Vladimir, Pham, Nhu-An, Yanagawa, Naoki, Liu, Geoffrey, Jurisica, Igor, Shepherd, Frances A., Tsao, Ming-Sound, Kislinger, Thomas, M

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 8.14 MB

english, 2011

22

[Lecture Notes in Computer Science] Interactive Knowledge Discovery and Data Mining in Biomedical Informatics Volume 8401 || On Topological Data Mining

Holzinger, Andreas, Jurisica, Igor

Year:

2014

Language:

english

File:

PDF, 637 KB

english, 2014

23

Dysregulation of the mevalonate pathway promotes transformation

Clendening, J. W., Pandyra, A., Boutros, P. C., Ghamrasni, S. E., Khosravi, F., Trentin, G. A., Martirosyan, A., Hakem, A., Hakem, R., Jurisica, I., Penn, L. Z.

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.29 MB

english, 2010

24

Optimization of experimental design parameters for high-throughput chromatin immunoprecipitation studies

Ponzielli, R., Boutros, P. C., Katz, S., Stojanova, A., Hanley, A. P., Khosravi, F., Bros, C., Jurisica, I., Penn, L. Z.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 251 KB

english, 2008

25

Inhibition of the Sodium/Potassium ATPase Impairs N-Glycan Expression and Function

Zavareh, R. B., Lau, K. S., Hurren, R., Datti, A., Ashline, D. J., Gronda, M., Cheung, P., Simpson, C. D., Liu, W., Wasylishen, A. R., Boutros, P. C., Shi, H., Vengopal, A., Jurisica, I., Penn, L. Z.,

Journal:

Cancer Research

Year:

2008

Language:

english

File:

PDF, 579 KB

english, 2008

26

Binary tree-structured vector quantization approach to clustering and visualizing microarray data

Sultan, M., Wigle, D.A., Cumbaa, C.A., Maziarz, M., Glasgow, J., Tsao, M.S., Jurisica, I.

Journal:

Year:

2002

Language:

english

File:

PDF, 1.15 MB

english, 2002

27

Prioritizing Therapeutics for Lung Cancer: An Integrative Meta-analysis of Cancer Gene Signatures and Chemogenomic Data

Fortney, Kristen, Griesman, Joshua, Kotlyar, Max, Pastrello, Chiara, Angeli, Marc, Sound-Tsao, Ming, Jurisica, Igor, Tucker-Kellogg, Greg

Journal:

PLoS Computational Biology

Year:

2015

Language:

english

File:

PDF, 814 KB

english, 2015

28

High-throughput protein crystallization on the World Community Grid and the GPU

Kotseruba, Yulia, Cumbaa, Christian A, Jurisica, Igor

Journal:

Journal of Physics Conference Series

Year:

2012

Language:

english

File:

PDF, 882 KB

english, 2012

29

Sliding Mode Control of Compliant Joints Robot

Sharkawy, A.B., Vitko, A., Šavel, M., Jurišica, L.

Journal:

IFAC Proceedings Volumes

Year:

2003

Language:

english

File:

PDF, 6.01 MB

english, 2003

30

Novel Biomarkers Predict Risk of Severe Illness in H1N1 Infection.

Zamel, R., Bai, X., Klement, W., Azad, S., Jurisica, I., Cypel, M., Waddell, T., Liu, M., Husain, S., Keshavjee, S.

Journal:

Transplantation Journal

Year:

2014

File:

PDF, 245 KB

2014

31

Unique circulating microrna profile identified in early radiographic knee osteoarthritis

Ali, S.A., Gandhi, R., Potla, P., Keshavarzi, S., Espin-Garcia, O., Shestopaloff, K., Pastrello, C., Bethune-Waddell, D., Lively, S., Perruccio, A., Rampersaud, R., Rockel, J., Jurisica, I., Appleton,

Journal:

Osteoarthritis and Cartilage

Year:

2020

File:

PDF, 142 KB

2020

32

Effect of autotaxin inhibition in a surgically-induced mouse model of osteoarthritis

Datta, Poulami, Gandhi, Rajiv, Nakamura, Sayaka, Lively, Starlee, Rossomacha, Evgeny, Potla, Pratibha, Shestopaloff, Konstantin, Endisha, Helal, Pastrello, Chiara, Jurisica, Igor, Rockel, Jason S., Ka

Journal:

Osteoarthritis and Cartilage Open

Year:

2020

File:

PDF, 2.42 MB

2020

33

Incremental Iterative Retrieval and Browsing for Efficient Conversational CBR Systems

Igor Jurisica, Janice Glasgow, John Mylopoulos

Journal:

Applied Intelligence

Year:

2000

Language:

english

File:

PDF, 303 KB

english, 2000

34

Programmed cell death 4 loss increases tumor cell invasion and is regulated by miR-21 in oral squamous cell carcinoma

Patricia P Reis, Miranda Tomenson, Nilva K Cervigne, Jerry Machado, Igor Jurisica, Melania Pintilie, Mahadeo A Sukhai, Bayardo Perez-Ordonez, Reidar Grénman, Ralph W Gilbert, Patrick J Gullane, Jonath

Journal:

Molecular Cancer

Year:

2010

Language:

english

File:

PDF, 3.58 MB

english, 2010

35

[Lecture Notes in Computer Science] Interactive Knowledge Discovery and Data Mining in Biomedical Informatics Volume 8401 || Visual Data Mining: Effective Exploration of the Biological Universe

Holzinger, Andreas, Jurisica, Igor

Year:

2014

Language:

english

File:

PDF, 790 KB

english, 2014

36

Identification of a microRNA signature associated with progression of leukoplakia to oral carcinoma

Cervigne, N. K., Reis, P. P., Machado, J., Sadikovic, B., Bradley, G., Galloni, N. N., Pintilie, M., Jurisica, I., Perez-Ordonez, B., Gilbert, R., Gullane, P., Irish, J., Kamel-Reid, S.

Journal:

Human Molecular Genetics

Year:

2009

Language:

english

File:

PDF, 607 KB

english, 2009

37

SCRIPDB: a portal for easy access to syntheses, chemicals and reactions in patents

Heifets, A., Jurisica, I.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.62 MB

english, 2012

38

Competitive in vivo screening of 64 candidate leukemia stem cell self-renewal regulators selects for genes protracting stem cell latency

Kaufmann, Kerstin, Ng, Stanley, Takayanagi, Shin-ichiro, McLeod, Jessica, van Galen, Peter, Wienholds, Erno, Xie, Stephanie, Mitchell, Amanda, Shlush, Liran, Jurisica, Igor, Wang, Jean, Dick, John

Journal:

Experimental Hematology

Year:

2017

Language:

english

File:

PDF, 183 KB

english, 2017

39

Inferring the functions of longevity genes with modular subnetwork biomarkers ofCaenorhabditis elegansaging

Kristen Fortney, Max Kotlyar, Igor Jurisica

Journal:

Year:

2010

Language:

english

File:

PDF, 1.15 MB

english, 2010

40

[Lecture Notes in Computer Science] Interactive Knowledge Discovery and Data Mining in Biomedical Informatics Volume 8401 || Knowledge Discovery and Visualization of Clusters for Erythromycin Related Adverse Events in the FDA Drug Adverse Event Reporting System

Holzinger, Andreas, Jurisica, Igor

Year:

2014

Language:

english

File:

PDF, 382 KB

english, 2014

41

Introduction: Knowledge Discovery in High-Throughput Biological Domains

Igor Jurisica, Janice Glasgow

Journal:

Information Systems Frontiers

Year:

2006

Language:

english

File:

PDF, 74 KB

english, 2006

42

Current Applications of Microarrays in Head and Neck Cancer Research

Giles C. Warner, Patricia P. Reis, Antti A. Makitie, Mahadeo A. Sukhai, Shilpi Arora, Igor Jurisica, Richard A. Wells, Patrick Gullane, Jonathan Irish, Suzanne Kamel-Reid

Journal:

The Laryngoscope

Year:

2004

Language:

english

File:

PDF, 1.39 MB

english, 2004

43

Characterization of the apoptotic response of human leukemia cells to organosulfur compounds

W Wei-Lynn Wong, Paul C Boutros, Amanda R Wasylishen, Kristal D Guckert, Erin M O'Brien, Rebecca Griffiths, Anna R Martirosyan, Christina Bros, Igor Jurisica, Richard F Langler, Linda Z Penn

Journal:

Year:

2010

Language:

english

File:

PDF, 1.33 MB

english, 2010

44

Differential roles of cyclin D1 and D3 in pancreatic ductal adenocarcinoma

Nikolina Radulovich, Nhu-An Pham, Dan Strumpf, Lisa Leung, Wing Xie, Igor Jurisica, Ming-Sound Tsao

Journal:

Molecular Cancer

Year:

2010

Language:

english

File:

PDF, 2.46 MB

english, 2010

45

[IEEE 2007 IEEE International Conference on Granular Computing (GRC 2007) - Fremont, CA, USA (2007.11.2-2007.11.4)] 2007 IEEE International Conference on Granular Computing (GRC 2007) - Comparison of Machine Learning and Pattern Discovery Algorithms for the Prediction of Human Single Nucleotide Polymorphisms

Yan, Rui, Boutros, Paul C., Jurisica, Igor, Penn, Linda Z.

Year:

2007

Language:

english

File:

PDF, 383 KB

english, 2007

46

Mining mouse microarray data

Dennis A Wigle,Janet Rossant,Igor Jurisica

Journal:

Year:

2001

Language:

english

File:

PDF, 328 KB

english, 2001

47

Systematic Identification of Oncogenic EGFR Interaction Partners

Petschnigg, Julia, Kotlyar, Max, Blair, Louise, Jurisica, Igor, Stagljar, Igor, Ketteler, Robin

Journal:

Journal of Molecular Biology

Year:

2017

Language:

english

File:

PDF, 2.47 MB

english, 2017

48

[IEEE 2018 ELEKTRO - Mikulov, Czech Republic (2018.5.21-2018.5.23)] 2018 ELEKTRO - General concepts of teleoperated systems

Jurisica, Ladislav, Duchon, Frantisek, Dekan, Martin, Babinec, Andrej, Paszto, Peter

Year:

2018

Language:

english

File:

PDF, 1.10 MB

english, 2018

49

Intelligent decision support for protein crystal growth

Jurisica, I., Rogers, P., Glasgow, J. I., Fortier, S., Luft, J. R., Wolfley, J. R., Bianca, M. A., Weeks, D. R., DeTitta, G. T.

Journal:

IBM Systems Journal

Year:

2001

Language:

english

File:

PDF, 2.81 MB

english, 2001

50

Stability and Heterogeneity of Expression Profiles in Lung Cancer Specimens Harvested Following Surgical Resection

Blackhall, Fiona H., Pintilie, Melania, Wigle, Dennis A., Jurisica, Igor, Liu, Ni, Radulovich, Nikolina, Johnston, Michael R., Keshavjee, Shaf, Tsao, Ming-Sound

Journal:

Year:

2004

Language:

english

File:

PDF, 130 KB

english, 2004

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