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1

Applications of Immunopharmacogenomics: Predicting, Preventing, and Understanding Immune-Mediated Adverse Drug Reactions

Karnes, Jason H., Miller, Matthew A., White, Katie D., Konvinse, Katherine C., Pavlos, Rebecca K., Redwood, Alec J., Peter, Jonathan G., Lehloenya, Rannakoe, Mallal, Simon A., Phillips, Elizabeth J.

Journal:

Annual Review of Pharmacology

Year:

2019

Language:

english

File:

PDF, 2.52 MB

english, 2019

2

An isotopic assay of cyclic 3′,5′-nucleotide phosphodiesterase with aluminum oxide columns

Charles R. Filburn, Jonathan Karn

Journal:

Analytical Biochemistry

Year:

1973

Language:

english

File:

PDF, 660 KB

english, 1973

3

Viable methodologies for the synthesis of high-quality nanostructures

Patete, Jonathan M., Peng, Xiaohui, Koenigsmann, Christopher, Xu, Yan, Karn, Barbara, Wong, Stanislaus S.

Journal:

Green Chemistry

Year:

2011

Language:

english

File:

PDF, 2.67 MB

english, 2011

4

Continuous Passive Motion following Cartilage Surgery: Does a Common Protocol Exist?

Karnes, Jonathan M., Harris, Joshua D., Griesser, Michael J., Flanigan, David C.

Journal:

The Physician and Sportsmedicine

Year:

2013

Language:

english

File:

PDF, 470 KB

english, 2013

5

Surgeon Specialty Influences Referral Rate for Osteoporosis Management following Vertebral Cement Augmentation of Compression Fracture

Daffner, Scott D., Karnes, Jonathan, Watkins, Colleen M.

Journal:

The Spine Journal

Year:

2015

Language:

english

File:

PDF, 74 KB

english, 2015

6

A novel co-culture model of murine K12 osteosarcoma cells and S. aureus on common orthopedic implant materials: ‘the race to the surface’ studied in vitro

McConda, David B., Karnes, Jonathan M., Hamza, Therwa, Lindsey, Brock A.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.69 MB

english, 2016

7

A Novel Rat Discitis Model Using Bioluminescent Staphylococcus Aureus

Bostian, Phillip A., Karnes, Jonathan, Cui, Shari, Emery, Sanford E.

Journal:

The Spine Journal

Year:

2016

Language:

english

File:

PDF, 202 KB

english, 2016

8

Negative Feedback Regulation of HIV-1 by Gene Editing Strategy

Kaminski, Rafal, Chen, Yilan, Salkind, Julian, Bella, Ramona, Young, Won-bin, Ferrante, Pasquale, Karn, Jonathan, Malcolm, Thomas, Hu, Wenhui, Khalili, Kamel

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.68 MB

english, 2016

9

The Molecular Basis for Human Immunodeficiency Virus Latency

Mbonye, Uri, Karn, Jonathan

Journal:

Annual Review of Virology

Year:

2017

Language:

english

File:

PDF, 2.04 MB

english, 2017

10

Computational Analysis of AmpSeq Data for Targeted, High-Throughput Genotyping of Amplicons

Fresnedo-Ramírez, Jonathan, Yang, Shanshan, Sun, Qi, Karn, Avinash, Reisch, Bruce I., Cadle-Davidson, Lance

Journal:

Frontiers in Plant Science

Year:

2019

Language:

english

File:

PDF, 459 KB

english, 2019

11

Cross-talk between microglia and neurons regulates HIV latency

Alvarez-Carbonell, David, Ye, Fengchun, Ramanath, Nirmala, Garcia-Mesa, Yoelvis, Knapp, Pamela E., Hauser, Kurt F., Karn, Jonathan, Swanstrom, Ronald

Journal:

Year:

2019

Language:

english

File:

PDF, 26.73 MB

english, 2019

12

Cross-talk between microglia and neurons regulates HIV latency

Alvarez-Carbonell, David, Ye, Fengchun, Ramanath, Nirmala, Garcia-Mesa, Yoelvis, Knapp, Pamela E., Hauser, Kurt F., Karn, Jonathan, Swanstrom, Ronald

Journal:

Year:

2019

File:

PDF, 26.73 MB

2019

13

Non-invasive characterization of human bone marrow stimulation and reconstitution by cell-free messenger RNA sequencing

Ibarra, Arkaitz, Zhuang, Jiali, Zhao, Yue, Salathia, Neeraj S., Huang, Vera, Acosta, Alexander D., Aballi, Jonathan, Toden, Shusuke, Karns, Amy P., Purnajo, Intan, Parks, Julianna R., Guo, Lucy, Mason

Journal:

Nature Communications

Year:

2020

Language:

english

File:

PDF, 1.09 MB

english, 2020

14

Cardiac synovial sarcoma with translocation (X; 18) associated with asbestos exposure

Cielette M. Karn, Mark A. Socinski, Jonathan A. Fletcher, Joseph M. Corson, John E. Craighead

Journal:

Year:

1994

Language:

english

File:

PDF, 1.62 MB

english, 1994

15

Silyl-Substituted Alkylidenes: Preparation of the Novel Complexes and Mechanistic Studies of Their Formation from Reactions of Alkylidenes with Silanes and Silyl-to-Alkylidyne Migration

Jaime R. Blanton, Tianniu Chen, Jonathan B. Diminnie, Hu Cai, Zhongzhi Wu, Liting Li, Karn R. Sorasaenee, Keith T. Quisenberry, Hongjun Pan, Chang-Sheng Wang, et al. et al.

Journal:

Year:

2003

File:

PDF, 62 KB

2003

16

ChemInform Abstract: Viable Methodologies for the Synthesis of High-Quality Nanostructures

Jonathan M. Patete, Xiaohui Peng, Christopher Koenigsmann, Yan Xu, Barbara Karn, Stanislaus S. Wong

Journal:

Year:

2011

File:

PDF, 27 KB

2011

17

Control of human immunodeficiency virus replication by the tat, rev, nef and protease genes

Journal:

Current Opinion in Immunology

Year:

1991

Language:

english

File:

PDF, 1.54 MB

english, 1991

18

Synthesis, characterization and X-ray structures of new molybdenum bis(imide) amide and silyl complexes

Tianniu Chen, Karn R Sorasaenee, Zhongzhi Wu, Jonathan B Diminnie, Ziling Xue

Journal:

Inorganica Chimica Acta

Year:

2003

Language:

english

File:

PDF, 267 KB

english, 2003

19

Silyl-substituted alkylidenes: preparation of the novel complexes and mechanistic studies of their formation from reactions of alkylidenes with silanes and silyl-to-alkylidyne migration

Jaime R. Blanton, Tianniu Chen, Jonathan B. Diminnie, Hu Cai, Zhongzhi Wu, Liting Li, Karn R. Sorasaenee, Keith T. Quisenberry, Hongjun Pan, Chang-Sheng Wang, Sai-Heung Choi, Yun-Dong Wu, Zhenyang Lin

Journal:

Journal of Molecular Catalysis A: Chemical

Year:

2002

Language:

english

File:

PDF, 145 KB

english, 2002

20

The rapid non-polar transport of auxin in the phloem of intactColeusplants

Mary Helen M. Goldsmith, Dominic A. Cataldo, Jonathan Karn, Terry Brenneman, Pieter Trip

Journal:

Year:

1974

Language:

english

File:

PDF, 2.27 MB

english, 1974

21

Evolutionary significance of an algal gene encoding an [FeFe]-hydrogenase with F-domain homology and hydrogenase activity inChlorella variabilisNC64A

Jonathan E. Meuser, Eric S. Boyd, Gennady Ananyev, Devin Karns, Randor Radakovits, U. M. Narayana Murthy, Maria L. Ghirardi, G. Charles Dismukes, John W. Peters, Matthew C. Posewitz

Journal:

Year:

2011

Language:

english

File:

PDF, 2.01 MB

english, 2011

22

Impact of microbial diversity on rapid detection of enterohemorrhagic Escherichia coli in surface waters

Daniel R. Shelton, Jeffrey S. Karns, James A. Higgins, Jo Ann S. Van Kessel, Michael L. Perdue, Kenneth T. Belt, Jonathan Russell-Anelli, Chitrita DebRoy

Journal:

FEMS Microbiology Letters

Year:

2006

Language:

english

File:

PDF, 124 KB

english, 2006

23

Molecular analysis of the unc-54 myosin heavy-chain gene of Caenorhabditis elegans

MacLeod, Alexander R., Karn, Jonathan, Brenner, Sydney

Journal:

Year:

1981

File:

PDF, 801 KB

1981

24

Periodic charge distributions in the myosin rod amino acid sequence match cross-bridge spacings in muscle

McLachlan, Andrew D., Karn, Jonathan

Journal:

Year:

1982

File:

PDF, 661 KB

1982

25

Recruitment of TFIIH to the HIV LTR is a rate-limiting step in the emergence of HIV from latency

Kim, Young Kyeung, Bourgeois, Cyril F, Pearson, Richard, Tyagi, Mudit, West, Michelle J, Wong, Julian, Wu, Shwu-Yuan, Chiang, Cheng-Ming, Karn, Jonathan

Journal:

The EMBO Journal

Year:

2006

Language:

english

File:

PDF, 251 KB

english, 2006

26

CBF-1 promotes transcriptional silencing during the establishment of HIV-1 latency

Tyagi, Mudit, Karn, Jonathan

Journal:

The EMBO Journal

Year:

2007

Language:

english

File:

PDF, 548 KB

english, 2007

27

Methods in enzymology, vol. 152: guide to molecular cloning techniques: edited by Shelby L. Berger and Alan R. Kimmel, Academic Press, 1987. $89.00 (xl + 812 pages) ISBN 0-12-182053-X

Journal:

Trends in Genetics

Year:

1988

Language:

english

File:

PDF, 153 KB

english, 1988

28

Gene expression technology (methods in enzymology vol. 185): edited by D.V. Goeddel, Academic Press, 1990. $80.00 (xxxi + 681 pages) ISBN 0 12 182086 6

Journal:

Trends in Genetics

Year:

1991

Language:

english

File:

PDF, 144 KB

english, 1991

29

New insights into the mechanism of HIV-1 trans-activation

Jonathan Karn, Maria A. Graeble

Journal:

Trends in Genetics

Year:

1992

Language:

english

File:

PDF, 458 KB

english, 1992

30

The retroviridae (Vol. 1): Jay A. Levy Plenum Press, 1992, $95.00 hbk (xiv + 483 pages) ISBN 0 306 44074 1

Journal:

Trends in Genetics

Year:

1993

Language:

english

File:

PDF, 144 KB

english, 1993

31

Progress in anti-HIV structure-based drug design

Michael J. Gait, Jonathan Karn

Journal:

Trends in Biotechnology

Year:

1995

Language:

english

File:

PDF, 1.02 MB

english, 1995

32

High Affinity Binding of TAR RNA by the Human Immunodeficiency Virus Type-1 tat Protein Requires Base-pairs in the RNA Stem and Amino Acid Residues Flanking the Basic Region

Mark J. Churcher, Christina Lamont, François Hamy, Colin Dingwall, Sheila M. Green, Anthony D. Lowe, P.Jonathan G. Butler, Michael J. Gait, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1993

File:

PDF, 1.66 MB

1993

33

Hydrogen-bonding Contacts in the Major Groove are required for Human Immunodeficiency Virus Type-1 tat Protein Recognition of TAR RNA

François Hamy, Ulysse Asseline, Jane Grasby, Shigenori Iwai, Clare Pritchard, George Slim, P.Jonathan G. Butler, Jonathan Karn, Michael J. Gait

Journal:

Journal of Molecular Biology

Year:

1993

File:

PDF, 1.06 MB

1993

34

A Molecular Rheostat: Co-operative Rev Binding to Stem I of the Rev-response Element Modulates Human Immunodeficiency Virus Type-1 Late Gene Expression

Derek A. Mann, Ivan Mikaélian, Rodney W. Zemmel, Sheila M. Green, Anthony D. Lowe, Tominori Kimura, Mohinder Singh, P. Jonathan, G. Butler, Michael J. Gait, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1994

File:

PDF, 1.19 MB

1994

35

The Human Immunodeficiency Virus Long Terminal Repeat Includes a Specialised Initiator Element which is Required for Tat-responsive Transcription

Karola Rittner, Mark J. Churcher, Michael J. Gait, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1995

Language:

english

File:

PDF, 1.47 MB

english, 1995

36

The Structure of the Human Immunodeficiency Virus Type-1 TAR RNA Reveals Principles of RNA Recognition by Tat Protein

Fareed Aboul-ela, Jonathan Karn, Gabriele Varani

Journal:

Journal of Molecular Biology

Year:

1995

Language:

english

File:

PDF, 4.21 MB

english, 1995

37

nteractions of INS (CRS) Elements and the Splicing Machinery Regulate the Production of Rev-responsive mRNAs

Ivan Mikaélian, Marion Krieg, Michael J. Gait, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 2.35 MB

english, 1996

38

Flexible Regions of RNA Structure Facilitate Co-operative Rev Assembly on the Rev-response Element

Rodney W. Zemmel, Ann C. Kelley, Jonathan Karn, Jonathan G.P. Butler

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.44 MB

english, 1996

39

Synergistic stimulation of HIV-1 rev-dependent export of unspliced mRNA to the cytoplasm by hnRNP A1

Isabel Najera, Marion Krieg, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 593 KB

english, 1999

40

Direct evidence that HIV-1 tat stimulates RNA polymerase II carboxyl-terminal domain hyperphosphorylation during transcriptional elongation

Catherine Isel, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 377 KB

english, 1999

41

Tackling tat

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 558 KB

english, 1999

42

Cyclic nucleotide phosphodiesterases of Hyalophora cecropia silkmoth fat body

Charles R. Filburn, Jonathan Karn, G.R. Wyatt

Journal:

Biochimica et Biophysica Acta (BBA) - Enzymology

Year:

1977

Language:

english

File:

PDF, 679 KB

english, 1977

43

A Motion Maintaining Antibiotic Delivery System

Adolph V. Lombardi Jr, Jonathan M. Karnes, Keith R. Berend

Journal:

The Journal of Arthroplasty

Year:

2007

Language:

english

File:

PDF, 173 KB

english, 2007

44

Rational Design of Inhibitors of HIV-1 TAR RNA through the Stabilisation of Electrostatic “Hot Spots”

Ben Davis, Mohammad Afshar, Gabriele Varani, Alastair I.H. Murchie, Jonathan Karn, Georg Lentzen, Martin Drysdale, Justin Bower, Andrew J. Potter, Ian D. Starkey, Terry Swarbrick, Fareed Aboul-ela

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 2.01 MB

english, 2004

45

T-Cell Receptor Signaling Enhances Transcriptional Elongation from Latent HIV Proviruses by Activating P-TEFb through an ERK-Dependent Pathway

Young Kyeung Kim, Uri Mbonye, Joseph Hokello, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.94 MB

english, 2011

46

Special Issue: Structural and Molecular Biology of HIV

Michael F. Summers, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 95 KB

english, 2011

47

Paramyosin gene (unc-15) of Caenorhabditis elegans: Molecular cloning, nucleotide sequence and models for thick filament structure

Hiroaki Kagawa, Keiko Gengyo, Andrew D. Mclachlan, Sydney Brenner, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1989

Language:

english

File:

PDF, 7.35 MB

english, 1989

48

Methamphetamine activates nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) and induces human immunodeficiency virus (HIV) transcription in human microglial cells

Emily S. Wires, David Alvarez, Curtis Dobrowolski, Yun Wang, Marisela Morales, Jonathan Karn, Brandon K. Harvey

Journal:

Journal of NeuroVirology

Year:

2012

Language:

english

File:

PDF, 1.63 MB

english, 2012

49

Periodic features in the amino acid sequence of nematode myosin rod

Andrew D. McLachlan, Jonathan Karn

Journal:

Journal of Molecular Biology

Year:

1983

Language:

english

File:

PDF, 1.39 MB

english, 1983

50

Sequence analysis of mutations that affect the synthesis, assembly and enzymatic activity of the unc-54 myosin heavy chain of Caenorhabditis elegans

Nick J. Dibb, Daniel M. Brown, Jonathan Karn, Donald G. Moerman, Suzanne L. Bolten, Robert H. Waterston

Journal:

Journal of Molecular Biology

Year:

1985

Language:

english

File:

PDF, 1.13 MB

english, 1985

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