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51

Effect of single amino acid substitutions at the same position on stability of a two-domain protein

Katsuhide Yutani, Kyoko Ogasahara, Akio Kimura, Yoshinobu Sugino

Journal:

Journal of Molecular Biology

Year:

1982

Language:

english

File:

PDF, 283 KB

english, 1982

52

Contribution of Hydrogen Bonds to the Conformational Stability of Human Lysozyme: Calorimetry and X-ray Analysis of Six Tyrosine → Phenylalanine Mutants †,‡

Yamagata, Yuriko, Kubota, Masahiro, Sumikawa, Yohei, Funahashi, Jun, Takano, Kazufumi, Fujii, Satoshi, Yutani, Katsuhide

Journal:

Year:

1998

Language:

english

File:

PDF, 256 KB

english, 1998

53

Role of Surface Hydrophobic Residues in the Conformational Stability of Human Lysozyme at Three Different Positions †,‡

Funahashi, Jun, Takano, Kazufumi, Yamagata, Yuriko, Yutani, Katsuhide

Journal:

Year:

2000

Language:

english

File:

PDF, 469 KB

english, 2000

54

Structure and function of a TetR family transcriptional regulator, SbtR, from thermus thermophilus HB8

Agari, Yoshihiro, Sakamoto, Keiko, Yutani, Katsuhide, Kuramitsu, Seiki, Shinkai, Akeo

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 739 KB

english, 2013

55

The Process of Amyloid-like Fibril Formation by Methionine Aminopeptidase from a Hyperthermophile, Pyrococcus furiosus †

Yutani, Katsuhide, Takayama, Goh, Goda, Shuichiro, Yamagata, Yuriko, Maki, Saori, Namba, Keiichi, Tsunasawa, Susumu, Ogasahara, Kyoko

Journal:

Year:

2000

Language:

english

File:

PDF, 301 KB

english, 2000

56

Conformational Changes in the Tryptophan Synthase from a Hyperthermophile upon α 2 β 2 Complex Formation: Crystal Structure of the Complex †,‡

Lee, Soo Jae, Ogasahara, Kyoko, Ma, Jichun, Nishio, Kazuya, Ishida, Masami, Yamagata, Yuriko, Tsukihara, Tomitake, Yutani, Katsuhide

Journal:

Year:

2005

Language:

english

File:

PDF, 873 KB

english, 2005

57

Contribution of Salt Bridges near the Surface of a Protein to the Conformational Stability †,‡

Takano, Kazufumi, Tsuchimori, Kimiko, Yamagata, Yuriko, Yutani, Katsuhide

Journal:

Year:

2000

Language:

english

File:

PDF, 138 KB

english, 2000

58

Effect of amino acid substitutions on conformational stability of a protein

Katsuhide Yutani,

Journal:

Advances in Biophysics

Year:

1985

Language:

english

File:

PDF, 737 KB

english, 1985

59

Dependence of Conformational Stability on Hydrophobicity of the Amino Acid Residue in a Series of Variant Proteins Substituted at a Unique Position of Tryptophan Synthase α Subunit

Katsuhide Yutani, Kyoko Ogasahara, Tadahiro Tsujita and Yoshinobu Sugino

Journal:

Proceedings of the National Academy of Sciences

Year:

1987

Language:

english

File:

PDF, 625 KB

english, 1987

60

The Unusually Slow Unfolding Rate Causes the High Stability of Pyrrolidone Carboxyl Peptidase from a Hyperthermophile, Pyrococcus furiosus : Equilibrium and Kinetic Studies of Guanidine Hydrochloride-Induced Unfolding and Refolding †

Ogasahara, Kyoko, Nakamura, Mamoru, Nakura, Satomi, Tsunasawa, Susumu, Kato, Ikunoshin, Yoshimoto, Tadashi, Yutani, Katsuhide

Journal:

Year:

1998

Language:

english

File:

PDF, 91 KB

english, 1998

61

Effects of proline mutations on the unfolding and refolding of human lysozyme: the slow refolding kinetic phase does not result from proline cis-trans isomerization

Herning, Thierry, Yutani, Katsuhide, Taniyama, Yoshio, Kikuchi, Masakazu

Journal:

Year:

1991

Language:

english

File:

PDF, 1.68 MB

english, 1991

62

Contribution of Intra- and Intermolecular Hydrogen Bonds to the Conformational Stability of Human Lysozyme †,‡

Takano, Kazufumi, Yamagata, Yuriko, Funahashi, Jun, Hioki, Yusaku, Kuramitsu, Seiki, Yutani, Katsuhide

Journal:

Year:

1999

Language:

english

File:

PDF, 195 KB

english, 1999

63

Contribution of Hydrogen Bonds to the Conformational Stability of Human Lysozyme: Calorimetry and X-ray Analysis of Six Ser → Ala Mutants †,‡

Takano, Kazufumi, Yamagata, Yuriko, Kubota, Masahiro, Funahashi, Jun, Fujii, Satoshi, Yutani, Katsuhide

Journal:

Year:

1999

Language:

english

File:

PDF, 114 KB

english, 1999

64

Characterization of the Denatured Structure of Pyrrolidone Carboxyl Peptidase from a Hyperthermophile under Nondenaturing Conditions: Role of the C-Terminal α-Helix of the Protein in Folding and Stability †,‡

Iimura, Satoshi, Umezaki, Taro, Takeuchi, Makoto, Mizuguchi, Mineyuki, Yagi, Hiromasa, Ogasahara, Kyoko, Akutsu, Hideo, Noda, Yasuo, Segawa, Shin-ichi, Yutani, Katsuhide

Journal:

Year:

2007

Language:

english

File:

PDF, 259 KB

english, 2007

65

Contribution of the Hydrophobic Effect to the Stability of Human Lysozyme: Calorimetric Studies and X-ray Structural Analyses of the Nine Valine to Alanine Mutants †,‡

Takano, Kazufumi, Yamagata, Yuriko, Fujii, Satoshi, Yutani, Katsuhide

Journal:

Year:

1997

Language:

english

File:

PDF, 951 KB

english, 1997

66

Conformational Changes in the α-Subunit Coupled to Binding of the β 2 -Subunit of Tryptophan Synthase from Escherichia coli : Crystal Structure of the Tryptophan Synthase α-Subunit Alone †,‡

Nishio, Kazuya, Morimoto, Yukio, Ishizuka, Manabu, Ogasahara, Kyoko, Tsukihara, Tomitake, Yutani, Katsuhide

Journal:

Year:

2005

Language:

english

File:

PDF, 617 KB

english, 2005

67

Guanidine hydrochloride-induced unfolding of the .alpha. subunit of tryptophan synthase and of the two .alpha. proteolytic fragments: evidence for stepwise unfolding of the two .alpha. domains

Miles, Edith Wilson, Yutani, Katsuhide, Ogasahara, Kyoko

Journal:

Year:

1982

Language:

english

File:

PDF, 924 KB

english, 1982

68

Equilibrium and Kinetic Analyses of Unfolding and Refolding for the Conserved Proline Mutants of Tryptophan Synthase α Subunit †

Ogasahara, Kyoko, Yutani, Katsuhide

Journal:

Year:

1997

Language:

english

File:

PDF, 208 KB

english, 1997

69

Structural Characterization of a Trapped Folding Intermediate of Pyrrolidone Carboxyl Peptidase from a Hyperthermophile

Mizuguchi, Mineyuki, Takeuchi, Makoto, Ohki, Shinya, Nabeshima, Yuko, Kouno, Takahide, Aizawa, Tomoyasu, Demura, Makoto, Kawano, Keiichi, Yutani, Katsuhide

Journal:

Year:

2012

Language:

english

File:

PDF, 1.51 MB

english, 2012

70

Electrostatic Stabilization in Methionine Aminopeptidase from Hyperthermophile Pyrococcus f uriosus †

Ogasahara, Kyoko, Lapshina, Elena A., Sakai, Miyo, Izu, Yukiko, Tsunasawa, Susumu, Kato, Ikunoshin, Yutani, Katsuhide

Journal:

Year:

1998

Language:

english

File:

PDF, 107 KB

english, 1998

71

Folding Pathway of Escherichia coli Ribonuclease HI: A Circular Dichroism, Fluorescence, and NMR Study

Yamasaki, Kazuhiko, Ogasahara, Kyoko, Yutani, Katsuhide, Oobatake, Motohisa, Kanaya, Shigenori

Journal:

Year:

1996

File:

PDF, 48 KB

1996

72

Proton nuclear magnetic resonance studies on the wild-type and single amino acid substituted tryptophan synthase .alpha.-subunits

Yutani, Katsuhide, Akutsu, Hideo, Ogasahara, Kyoko, Tsujita, Tadahiro, Kyogoku, Yoshimasa

Journal:

Year:

1987

Language:

english

File:

PDF, 654 KB

english, 1987

73

Completely Buried, Non-Ion-Paired Glutamic Acid Contributes Favorably to the Conformational Stability of Pyrrolidone Carboxyl Peptidases from Hyperthermophiles †,‡

Kaushik, Jai K., Iimura, Satoshi, Ogasahara, Kyoko, Yamagata, Yuriko, Segawa, Shin-ichi, Yutani, Katsuhide

Journal:

Year:

2006

Language:

english

File:

PDF, 231 KB

english, 2006

74

Enthalpic destabilization of a mutant human lysozyme lacking a disulfide bridge between cysteine-77 and cysteine-95

Kuroki, Ryota, Inaka, Koji, Taniyama, Yoshio, Kidokoro, Shunichi, Matsushima, Masaaki, Kikuchi, Masakazu, Yutani, Katsuhide

Journal:

Year:

1992

Language:

english

File:

PDF, 1.17 MB

english, 1992

75

Role of Amino Acid Residues at Turns in the Conformational Stability and Folding of Human Lysozyme †,‡

Takano, Kazufumi, Yamagata, Yuriko, Yutani, Katsuhide

Journal:

Year:

2000

Language:

english

File:

PDF, 245 KB

english, 2000

76

Contribution of Polar Groups in the Interior of a Protein to the Conformational Stability †,‡

Takano, Kazufumi, Yamagata, Yuriko, Yutani, Katsuhide

Journal:

Year:

2001

Language:

english

File:

PDF, 120 KB

english, 2001

77

Thermodynamic Basis for the Stabilities of Three CutA1s from Pyrococcus horikoshii, Thermus thermophilus , and Oryza sativa , with Unusually High Denaturation Temperatures †

Sawano, Masahide, Yamamoto, Hitoshi, Ogasahara, Kyoko, Kidokoro, Shun-ichi, Katoh, Shizue, Ohnuma, Takayuki, Katoh, Etsuko, Yokoyama, Shigeyuki, Yutani, Katsuhide

Journal:

Year:

2008

Language:

english

File:

PDF, 221 KB

english, 2008

78

Unusually Slow Denaturation and Refolding Processes of Pyrrolidone Carboxyl Peptidase from a Hyperthermophile Are Highly Cooperative: Real-Time NMR Studies

Iimura, Satoshi, Yagi, Hiromasa, Ogasahara, Kyoko, Akutsu, Hideo, Noda, Yasuo, Segawa, Shin-ichi, Yutani, Katsuhide

Journal:

Year:

2004

Language:

english

File:

PDF, 219 KB

english, 2004

79

Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with x-ray structure analysis of proline mutants

Herning, Thierry, Yutani, Katsuhide, Inaka, Koji, Kuroki, Ryota, Matsushima, Masaaki, Kikuchi, Masakazu

Journal:

Year:

1992

Language:

english

File:

PDF, 1.00 MB

english, 1992

80

Folding Pathway of Escherichia coli Ribonuclease HI: A Circular Dichroism, Fluorescence, and NMR Study

Yamasaki, Kazuhiko, Ogasahara, Kyoko, Yutani, Katsuhide, Oobatake, Motohisa, Kanaya, Shigenori

Journal:

Year:

1995

Language:

english

File:

PDF, 1.99 MB

english, 1995

81

Study of cysteine residues in the α subunit of Escherichia coli tryptophan synthase. 1. Role in conformational stability

Hiraga, Kaori, Yutani, Katsuhide

Journal:

Protein Engineering Design and Selection

Year:

1996

Language:

english

File:

PDF, 975 KB

english, 1996

82

Crystal Structural and Functional Analysis of the Putative Dipeptidase from Pyrococcus horikoshii OT3

Jeyakanthan, Jeyaraman, Takada, Katsumi, Sawano, Masahide, Ogasahara, Kyoko, Mizutani, Hisashi, Kunishima, Naoki, Yokoyama, Shigeyuki, Yutani, Katsuhide

Journal:

Journal of Biophysics

Year:

2009

Language:

english

File:

PDF, 3.35 MB

english, 2009

83

Correlation of surface properties with conformational stabilities of wild-type and six mutant tryptophan synthase α-subunits substituted at the same position

Kato, Akio, Yutani, Katsuhide

Journal:

Protein Engineering Design and Selection

Year:

1988

Language:

english

File:

PDF, 735 KB

english, 1988

84

Entropic Stabilization of a Mutant Human Lysozyme Induced by Calcium Binding

Ryota Kuroki, Shigetsugu Kawakita, Haruki Nakamura and Katsuhide Yutani

Journal:

Proceedings of the National Academy of Sciences

Year:

1992

Language:

english

File:

PDF, 875 KB

english, 1992

85

Derivatization of Proteinase K with Heavy Atoms Enhances Its Thermal Stability

Yazawa, Kenjiro, Sugahara, Michihiro, Yutani, Katsuhide, Takehira, Michiyo, Numata, Keiji

Journal:

Year:

2016

Language:

english

File:

PDF, 1.82 MB

english, 2016

86

Thermodynamics of protein denaturation at temperatures over 100 °C: CutA1 mutant proteins substituted with hydrophobic and charged residues

Matsuura, Yoshinori, Takehira, Michiyo, Joti, Yasumasa, Ogasahara, Kyoko, Tanaka, Tomoyuki, Ono, Naoko, Kunishima, Naoki, Yutani, Katsuhide

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 802 KB

english, 2015

87

Human ER oxidoreductin-1α (Ero1α) undergoes dual regulation through complementary redox interactions with Protein Disulfide Isomerase (PDI)

Kanemura, Shingo, Okumura, Masaki, Yutani, Katsuhide, Ramming, Thomas, Hikima, Takaaki, Appenzeller-Herzog, Christian, Akiyama, Shuji, Inaba, Kenji

Journal:

Journal of Biological Chemistry

Year:

2016

Language:

english

File:

PDF, 4.23 MB

english, 2016

88

A strategy for stabilization of CutA1 proteins due to ion-ion interactions at temperatures of over 100 °C

Matsuura, Yoshinori, Takehira, Michiyo, Makhatadze, George I, Joti, Yasumasa, naitow, hisashi, Kunishima, Naoki, Yutani, Katsuhide

Journal:

Year:

2018

Language:

english

File:

PDF, 921 KB

english, 2018

89

Accumulation of amino-terminally formylated tryptophan synthase in amplifying conditions.

TSUNASAW, Susumu, YUTANI, Katsuhide, OGASAHARA, Kyoko, TAKETANI, Makoto, YASUOK, Noritake, KAKUDO, Masao, SUGINO, Yoshinobu

Journal:

Agricultural and Biological Chemistry

Year:

1983

Language:

english

File:

PDF, 489 KB

english, 1983

90

1P123 TFE-induced conformations of a synthesized oligopeptide originating from the C-terminal α-helix of pyrrolidone carboxyl peptidase(3. Protein folding and misfolding (1),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Umezaki, Taro, IImura, Satoshi, Noda, Yasuo, Yutani, Katsuhide, Segawa, Shin-ichi

Journal:

Seibutsu Butsuri

Year:

2006

Language:

english

File:

PDF, 153 KB

english, 2006

91

3P-003 The folding of PCP (Pyrrolidone Carboxyl Peptidase) sequentially proceeds in the denatured state similar to the stage of molten globule(The 46th Annual Meeting of the Biophysical Society of Japan)

Yokota, Yohei, Yoshida, Atsushi, Noda, Yasuo, Yutani, Katsuhide, Segawa, Shin-ichi

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 289 KB

english, 2008

92

1P-041 Sequential folding pathway of PCP (pyrrolidone carboxyl peptidase) found in the molten-globule-like stage and the following folding transition(Protein:Property, The 47th Annual Meeting of the Biophysical Society of Japan)

Yokota, Yohei, Kinnman, Christopher, Yabumoto, Kazuyoshi, Noda, Yasuo, Yutani, Katsuhide, Segawa, Shin-Ici

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 236 KB

english, 2009

93

2P076 Structural stability of each domain appearing in the early stage of PCP folding monitored by amide H/D exchange rates(The 48th Annual Meeting of the Biophysical Society of Japan)

Kazuyoshi, Kazuyoshi, Kinmann, Christopher, Noda, Yasuo, Yutani, Katsuhide, Segawa, Shin-ichi

Journal:

Seibutsu Butsuri

Year:

2010

File:

PDF, 213 KB

2010

94

Conformational Changes of αs Casein by Heating

ONO, Tomotada, YUTANI, Katsuhide, ODAGIRI, Satoshi

Journal:

Agricultural and Biological Chemistry

Year:

1973

Language:

english

File:

PDF, 603 KB

english, 1973

95

1P-098 Analysis of changes in stabilizing mechanism due to substitutions of ion groups for tryptophan synthase α subunit from P. furiosus(The 46th Annual Meeting of the Biophysical Society of Japan)

Ogasahara, Kyoko, Kaushik, Jai, Makhatadze, George I., Lee, Soo Jae, Ohta, Kazuhiro, Tsukihara, Tomitake, Ishida, Masami, Yamagata, Yuriko, Yutani, Katsuhide

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 296 KB

english, 2008

96

2P066 Role of surface charged residues in the thermostability of CutA1 from a hyperthermophile, with a denaturation temperature of nearly 150℃(Proteins-stability, folding, and other physicochemical properties,Poster Presentations)

Yamamoto, Hitoshi, Matsuura, Yoshinori, Sawano, Masahide, Ogasawara, Kyoko, Katoh, Etsuko, Bagautdinov, Bagautdin, Kunishima, Naoki, Yutani, Katsuhide

Journal:

Seibutsu Butsuri

Year:

2007

Language:

english

File:

PDF, 237 KB

english, 2007

97

3P063 Observation of unfolding rates of each residue of PCP under the native condition : Mechanism for urea to accelerate the unfolding rate(01C. Protein: Property,Poster)

Fujii, Shinya, Noda, Yasuo, Yutani, Katsuhide, Segawa, Shin-ichi

Journal:

Seibutsu Butsuri

Year:

2013

Language:

english

File:

PDF, 693 KB

english, 2013

98

1TA1-08 The correlation between the catalytic susceptibility of cephalosporins and the thermal stabilities of their beta-lactamase acyl intermediates.(The 47th Annual Meeting of the Biophysical Society of Japan)

Nitanai, Yasushi, Shimamura, Tatsuro, Uchiyama, Takuro, Ishii, Yoshikazu, Takehira, Michiyo, Yutani, Katsuhide, Matsuzawa, Hiroshi, Miyano, Masashi

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 462 KB

english, 2009

99

2P072 Structural fluctuations in the folded structure of PCP-OSH at the initial stage of unfolding(Proteins-stability, folding, and other physicochemical properties,Poster Presentations)

Umezaki, Taro, Iimura, Satoshi, Noda, Yasuo, Yutani, Katsuhide, Segawa, Shin-ichi

Journal:

Seibutsu Butsuri

Year:

2007

File:

PDF, 230 KB

2007

100

1P117 Unfolding and refolding of three CutAls from P. horikoshii, T. thermophilus, and O. sativa, with unusually high denaturation temperatures(3. Protein folding and misfolding (1),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Sawano, Masahide, Ogasahara, Kyoko, Katoh, Shizue, Katoh, Etsuko, Yokoyama, Shigeyuki, Yutani, Katsuhide

Journal:

Seibutsu Butsuri

Year:

2006

Language:

english

File:

PDF, 166 KB

english, 2006