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1

Solvatochromic and Fluorogenic Dyes as Environment-Sensitive Probes: Design and Biological Applications

Klymchenko, Andrey S.

Journal:

Accounts of Chemical Research

Year:

2017

Language:

english

File:

PDF, 7.26 MB

english, 2017

2

Giant light-harvesting nanoantenna for single-molecule detection in ambient light

Trofymchuk, Kateryna, Reisch, Andreas, Didier, Pascal, Fras, François, Gilliot, Pierre, Mely, Yves, Klymchenko, Andrey S.

Journal:

Nature Photonics

Year:

2017

Language:

english

File:

PDF, 2.33 MB

english, 2017

3

Smartphone-assisted detection of nucleic acids by light-harvesting FRET-based nanoprobe

Severi, Caterina, Melnychuk, Nina, Klymchenko, Andrey S.

Journal:

Biosensors and Bioelectronics

Year:

2020

File:

PDF, 2.76 MB

2020

4

Virus-Sized DNA Nanoparticles for Gene Delivery Based on Micelles of Cationic Calixarenes

Dr. Roman V. Rodik, Dr. Andrey S. Klymchenko, Dr. Namrata Jain, Dr. Stanislav I. Miroshnichenko, Dr. Ludovic Richert, Dr. Vitaly I. Kalchenko, Prof. Dr. Yves Mély

Journal:

Chemistry - A European Journal

Year:

2011

Language:

english

File:

PDF, 1.36 MB

english, 2011

5

Disassembly-Driven Fluorescence Turn-on of Polymerized Micelles by Reductive Stimuli in Living Cells

Niko, Yosuke, Arntz, Youri, Mely, Yves, Konishi, Gen-ichi, Klymchenko, Andrey S.

Journal:

Chemistry - A European Journal

Year:

2014

Language:

english

File:

PDF, 2.33 MB

english, 2014

6

Fluorogenic Squaraine Dimers with Polarity-Sensitive Folding As Bright Far-Red Probes for Background-Free Bioimaging

Karpenko, Iuliia A., Collot, Mayeul, Richert, Ludovic, Valencia, Christel, Villa, Pascal, Mély, Yves, Hibert, Marcel, Bonnet, Dominique, Klymchenko, Andrey S.

Journal:

Journal of the American Chemical Society

Year:

2015

Language:

english

File:

PDF, 857 KB

english, 2015

7

Fluorescent Polymer Nanoparticles Based on Dyes: Seeking Brighter Tools for Bioimaging

Reisch, Andreas, Klymchenko, Andrey S.

Journal:

Year:

2016

Language:

english

File:

PDF, 4.29 MB

english, 2016

8

Apoptosis and eryptosis: Striking differences on biomembrane level

Pyrshev, Kyrylo A., Klymchenko, Andrey S., Csúcs, Gábor, Demchenko, Alexander P.

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2018

Language:

english

File:

PDF, 8.59 MB

english, 2018

9

Heat perturbation of bovine eye lens α-crystallin probed by covalently attached ratiometric fluorescent eye 4′-diethylamino-3-hydroxyflavone

S. V. Avilov, Cs. Bode, F. G. Tolgyesi, A. S. Klymchenko, J. Fidy, A. P. Demchenko

Journal:

Year:

2005

Language:

english

File:

PDF, 138 KB

english, 2005

10

Dendritic Nucleotides: Interaction with an Aliphatic Acid Monolayer

Guojie Wang, Mikhail Abramov, Arthur Van Aerschot, Jef Rozenski, Shengbin Lei, Andrei Klymchenko, Mark Van der Auweraer, Steven De Feyter, Piet Herdewijn

Journal:

Chemistry & Biodiversity

Year:

2008

Language:

english

File:

PDF, 456 KB

english, 2008

11

ChemInform Abstract: Synthesis and Spectroscopic Properties of Benzo- and Naphthofuryl-3-hydroxychromones (IV).

Andrey S. Klymchenko, Turan Ozturk, Vasyl G. Pivovarenko, Alexander P. Demchenko

Journal:

Year:

2001

File:

PDF, 30 KB

2001

12

ChemInform Abstract: A 3-Hydroxychromone with Dramatically Improved Fluorescence Properties.

Andrey S. Klymchenko, Turan Ozturk, Vasyl G. Pivovarenko, Alexander P. Demchenko

Journal:

Year:

2002

File:

PDF, 27 KB

2002

13

Structure and Behavior of Polydiacetylene-Based Micelles

Aurélia Perino, Andrey Klymchenko, Alexandre Morere, Emmanuel Contal, Alain Rameau, Jean-Michel Guenet, Yves Mély, Alain Wagner

Journal:

Macromolecular Chemistry and Physics

Year:

2011

Language:

english

File:

PDF, 514 KB

english, 2011

14

A peptide-based fluorescent ratiometric sensor for quantitative detection of proteins

Laurence Choulier, Volodymyr V. Shvadchak, Aletia Naidoo, Andrey S. Klymchenko, Yves Mély, Danièle Altschuh

Journal:

Analytical Biochemistry

Year:

2010

Language:

english

File:

PDF, 496 KB

english, 2010

15

Tuning excited state intramolecular proton transfer in 3-hydroxyflavone derivative by reaction of its isothiocyanate group with an amine

Andrey S. Klymchenko, Dmytro A. Yushchenko, Yves Mély

Journal:

Journal of Photochemistry and Photobiology A: Chemistry

Year:

2007

Language:

english

File:

PDF, 436 KB

english, 2007

16

New 3-hydroxyflavone derivatives for probing hydrophobic sites in microheterogeneous systems

Turan Ozturk, Andrey S. Klymchenko, Asli Capan, Sule Oncul, Simay Cikrikci, Sule Taskiran, Bahar Tasan, F. Betul Kaynak, Suheyla Ozbey, Alexander P. Demchenko

Journal:

Year:

2007

Language:

english

File:

PDF, 689 KB

english, 2007

17

Efficient Synthesis of Ratiometric Fluorescent Nucleosides Featuring 3-Hydroxychromone Nucleobases

Marie Spadafora, Victoria Y. Postupalenko, Volodymyr V. Shvadchak, Andrey S. Klymchenko, Yves Mély, Alain Burger, Rachid Benhida

Journal:

Year:

2009

Language:

english

File:

PDF, 491 KB

english, 2009

18

7-(2-Methoxycarbonylvinyl)-3-hydroxychromones: new dyes with red shifted dual emission

Andrey S. Klymchenko, Yves Mély

Journal:

Tetrahedron Letters

Year:

2004

Language:

english

File:

PDF, 289 KB

english, 2004

19

3-Hydroxybenzo[g]quinolones: dyes with red-shifted absorption and highly resolved dual emission

Mykhailo D. Bilokin, Volodymyr V. Shvadchak, Dmytro A. Yushchenko, Andrey S. Klymchenko, Guy Duportail, Yves Mely, Vasyl G. Pivovarenko

Journal:

Tetrahedron Letters

Year:

2009

Language:

english

File:

PDF, 670 KB

english, 2009

20

Semi-empirical study of two-color fluorescent dyes based on 3-hydroxychromone

Semen O. Yesylevskyy, Andrey S. Klymchenko, Alexander P. Demchenko

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

2005

Language:

english

File:

PDF, 208 KB

english, 2005

21

Ultrasensitive fluorescent probe for the hydrophobic range of solvent polarities

Sebnem Ercelen, Andrey S Klymchenko, Alexander P Demchenko

Journal:

Analytica Chimica Acta

Year:

2002

Language:

english

File:

PDF, 251 KB

english, 2002

22

A 3-hydroxychromone with dramatically improved fluorescence properties

Andrey S Klymchenko, Turan Ozturk, Vasyl G Pivovarenko, Alexander P Demchenko

Journal:

Tetrahedron Letters

Year:

2001

Language:

english

File:

PDF, 129 KB

english, 2001

23

Synthesis of furanochromones: a new step in improvement of fluorescence properties

Andrey S. Klymchenko, Turan Ozturk, Alexander P. Demchenko

Journal:

Tetrahedron Letters

Year:

2002

Language:

english

File:

PDF, 185 KB

english, 2002

24

Novel Two-Band Ratiometric Fluorescence Probes with Different Location and Orientation in Phospholipid Membranes

Andrey S Klymchenko, Guy Duportail, Turan Ozturk, Vasyl G Pivovarenko, Yves Mély, Alexander P Demchenko

Journal:

Chemistry & Biology

Year:

2002

Language:

english

File:

PDF, 211 KB

english, 2002

25

Perturbation of planarity as the possible mechanism of solvent-dependent variations of fluorescence quantum yield in 2-aryl-3-hydroxychromones

Andrey S Klymchenko, Vasyl G Pivovarenko, Alexander P Demchenko

Journal:

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy

Year:

2003

Language:

english

File:

PDF, 141 KB

english, 2003

26

Membrane Dipole Potential as Measured by Ratiometric 3-Hydroxyflavone Fluorescence Probes: Accounting for Hydration Effects

Gora M`Baye, Vasyl V. Shynkar, Andrey S. Klymchenko, Yves Mély, Guy Duportail

Journal:

Journal of Fluorescence

Year:

2006

Language:

english

File:

PDF, 388 KB

english, 2006

27

Polarity Assessment of Thermoresponsive Poly(NIPAM-co-NtBA) Copolymer Films Using Fluorescence Methods

Boguslaw Szczupak, Alan G. Ryder, Denisio M. Togashi, Andrey S. Klymchenko, Yuri A. Rochev, Alexander Gorelov, Thomas J. Glynn

Journal:

Journal of Fluorescence

Year:

2010

Language:

english

File:

PDF, 365 KB

english, 2010

28

Effects of polar protic solvents on dual emissions of 3-hydroxychromones

Andrey S Klymchenko, Cyril Kenfack, Guy Duportail, Yves Mély

Journal:

Journal of Chemical Sciences

Year:

2007

Language:

english

File:

PDF, 204 KB

english, 2007

29

Resolution of Cys and Lys labeling of α-crystallin with site-sensitive fluorescent 3-hydroxyflavone dye

Andrey S. Klymchenko, Sergiy V. Avilov, Alexander P. Demchenko

Journal:

Analytical Biochemistry

Year:

2004

Language:

english

File:

PDF, 334 KB

english, 2004

30

On the Coupling Between Surface Charge and Hydration in Biomembranes: Experiments with 3-Hydroxyflavone Probes

Guy Duportail, Andriy Klymchenko, Yves Mély, Alexander P. Demchenko

Journal:

Journal of Fluorescence

Year:

2002

Language:

english

File:

PDF, 60 KB

english, 2002

31

Modulation of the solvent-dependent dual emission in 3-hydroxychromones by substituents

Klymchenko, Andrey S., Pivovarenko, Vasyl G., Ozturk, Turan, Demchenko, Alexander P.

Journal:

New Journal of Chemistry

Year:

2003

Language:

english

File:

PDF, 208 KB

english, 2003

32

Improved Hydration-Sensitive Dual-Fluorescence Labels For Monitoring Peptide−Nucleic Acid Interactions

Zamotaiev, Oleksandr M., Postupalenko, Viktoriia Y., Shvadchak, Volodymyr V., Pivovarenko, Vasyl G., Klymchenko, Andrey S., Mély, Yves

Journal:

Bioconjugate Chemistry

Year:

2011

Language:

english

File:

PDF, 1.19 MB

english, 2011

33

Sensing Micelle Hydration by Proton-Transfer Dynamics of a 3-Hydroxychromone Dye: Role of the Surfactant Headgroup and Chain Length

Das, Ranjan, Duportail, Guy, Richert, Ludovic, Klymchenko, Andrey, Mély, Yves

Journal:

Year:

2012

Language:

english

File:

PDF, 2.63 MB

english, 2012

34

Neutral fluorescence probe with strong ratiometric response to surface charge of phospholipid membranes

Guy Duportail, Andrey Klymchenko, Yves Mely, Alexander Demchenko

Journal:

Year:

2001

Language:

english

File:

PDF, 197 KB

english, 2001

35

Excited-State Intramolecular Proton Transfer Distinguishes Microenvironments in Single- And Double-Stranded DNA

Klymchenko, Andrey S., Shvadchak, Volodymyr V., Yushchenko, Dmytro A., Jain, Namrata, Mély, Yves

Journal:

Journal of Physical Chemistry B

Year:

2008

Language:

english

File:

PDF, 831 KB

english, 2008

36

A FRET-based probe with a chemically deactivatable quencher

Leriche, Geoffray, Budin, Ghyslain, Darwich, Zeinab, Weltin, Denis, Mély, Yves, Klymchenko, Andrey S., Wagner, Alain

Journal:

Chemical Communications

Year:

2012

Language:

english

File:

PDF, 1.40 MB

english, 2012

37

Switchable Nile Red-Based Probe for Cholesterol and Lipid Order at the Outer Leaflet of Biomembranes

Oncul, Sule, Kucherak, Oleksandr A., Darwich, Zeinab, Yushchenko, Dmytro A., Arntz, Youri, Didier, Pascal, Mély, Yves, Klymchenko, Andrey S.

Journal:

Journal of the American Chemical Society

Year:

2010

Language:

english

File:

PDF, 2.73 MB

english, 2010

38

Lactose-ornithine bolaamphiphiles for efficient gene delivery in vitro

Namrata Jain, Valérie Goldschmidt, Sule Oncul, Youri Arntz, Guy Duportail, Yves Mély, Andrey S. Klymchenko

Journal:

International Journal of Pharmaceutics

Year:

2012

Language:

english

File:

PDF, 1.08 MB

english, 2012

39

A triterpene oleanolic acid conjugate with 3-hydroxyflavone derivative as a new membrane probe with two-color ratiometric response

Zeynep Turkmen, Andrey S. Klymchenko, Sule Oncul, Guy Duportail, Gulacti Topcu, Alexander P. Demchenko

Journal:

Journal of Biochemical and Biophysical Methods

Year:

2005

Language:

english

File:

PDF, 476 KB

english, 2005

40

Multiparametric probing of intermolecular interactions with fluorescent dye exhibiting excited state intramolecular proton transfer

Klymchenko, Andrey S., Demchenko, Alexander P.

Journal:

Physical Chemistry Chemical Physics

Year:

2003

Language:

english

File:

PDF, 208 KB

english, 2003

41

Simultaneous probing of hydration and polarity of lipid bilayers with 3-hydroxyflavone fluorescent dyes

Andrey S. Klymchenko, Yves Mély, Alexander P. Demchenko, Guy Duportail

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2004

Language:

english

File:

PDF, 534 KB

english, 2004

42

Two-color fluorescent probes for imaging the dipole potential of cell plasma membranes

Vasyl V. Shynkar, Andrey S. Klymchenko, Guy Duportail, Alexander P. Demchenko, Yves Mély

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2005

Language:

english

File:

PDF, 2.77 MB

english, 2005

43

Visualization of lipid domains in giant unilamellar vesicles using an environment-sensitive membrane probe based on 3-hydroxyflavone

Andrey S. Klymchenko, Sule Oncul, Pascal Didier, Emmanuel Schaub, Luis Bagatolli, Guy Duportail, Yves Mély

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2009

Language:

english

File:

PDF, 488 KB

english, 2009

44

Liquid ordered phase in cell membranes evidenced by a hydration-sensitive probe: Effects of cholesterol depletion and apoptosis

Sule Oncul, Andrey S. Klymchenko, Oleksandr A. Kucherak, Alexander P. Demchenko, Sophie Martin, Monique Dontenwill, Youri Arntz, Pascal Didier, Guy Duportail, Yves Mély

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2010

Language:

english

File:

PDF, 1.04 MB

english, 2010

45

Behavior of plant plasma membranes under hydrostatic pressure as monitored by fluorescent environment-sensitive probes

Yann Roche, Andrey S. Klymchenko, Patricia Gerbeau-Pissot, Patrick Gervais, Yves Mély, Françoise Simon-Plas, Jean-Marie Perrier-Cornet

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2010

Language:

english

File:

PDF, 614 KB

english, 2010

46

Monitoring membrane binding and insertion of peptides by two-color fluorescent label

V.Y. Postupalenko, V.V. Shvadchak, G. Duportail, V.G. Pivovarenko, A.S. Klymchenko, Y. Mély

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2011

Language:

english

File:

PDF, 1.09 MB

english, 2011

47

A novel leaflet-selective fluorescence labeling technique reveals differences between inner and outer leaflets at high bilayer curvature

Salvatore Chiantia, Andrey S. Klymchenko, Erwin London

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

48

Characterization of the lipid and protein organization in HBsAg viral particles by steady-state and time-resolved fluorescence spectroscopy

Vanille J. Greiner, Caroline Egelé, Sule Oncul, Frédéric Ronzon, Catherine Manin, Andrey Klymchenko, Yves Mély

Journal:

Year:

2010

Language:

english

File:

PDF, 560 KB

english, 2010

49

Temperature effects on α-crystallin structure probed by 6-bromomethyl-2-(2-furanyl)-3-hydroxychromone, an environmentally sensitive two-wavelength fluorescent dye covalently attached to the single Cys residue

Sergiy V. Avilov, Csaba Bode, Ferenc G. Tolgyesi, Andrey S. Klymchenko, Judit Fidy, Alexander P. Demchenko

Journal:

International Journal of Biological Macromolecules

Year:

2005

Language:

english

File:

PDF, 305 KB

english, 2005

50

The binding of novel two-color fluorescence probe FA to serum albumins of different species

Sebnem Ercelen, Andrey S. Klymchenko, Yves Mély, Alexander P. Demchenko

Journal:

International Journal of Biological Macromolecules

Year:

2005

Language:

english

File:

PDF, 263 KB

english, 2005

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