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1

Looking through genomics: concepts and technologies for plant and animal genomics

R. Appels, M. Francki, M. Cakir, M. Bellgard

Journal:

Functional & Integrative Genomics

Year:

2004

Language:

english

File:

PDF, 65 KB

english, 2004

2

Germin-like proteins (GLPs) in cereal genomes: gene clustering and dynamic roles in plant defence

James Breen, Matthew Bellgard

Journal:

Functional & Integrative Genomics

Year:

2010

Language:

english

File:

PDF, 669 KB

english, 2010

3

Advances in biotechnology and linking outputs to variation in complex traits: Plant and Animal Genome meeting January 2012

R. Appels, R. Barrero, M. Bellgard

Journal:

Functional & Integrative Genomics

Year:

2012

Language:

english

File:

PDF, 335 KB

english, 2012

4

High-throughput sequencing of ancient plant and mammal DNA preserved in herbivore middens

Dáithí C. Murray, Stuart G. Pearson, Richard Fullagar, Brian M. Chase, Jayne Houston, Jennifer Atchison, Nicole E. White, Matthew I. Bellgard, Edward Clarke, Mike Macphail, M. Thomas P. Gilbert, James

Journal:

Quaternary Science Reviews

Year:

2012

Language:

english

File:

PDF, 668 KB

english, 2012

5

Response of Mycorrhizal Diversity to Current Climatic Changes

Bellgard, Stanley, Williams, Stephen

Journal:

Year:

2011

Language:

english

File:

PDF, 1.74 MB

english, 2011

6

Design, development and deployment of a web-based patient registry for rare genetic lipid disorders

Napier, Kathryn R., Hooper, Amanda J., Ng, David M., Render, Lee, Bell, Damon A., Pang, Jing, Watts, Gerald F., Bellgard, Matthew I., Burnett, John R.

Journal:

Year:

2020

File:

PDF, 355 KB

2020

7

ThalInd, a β-thalassemia and hemoglobinopathies database for India: defining a model country-specific and disease-centric bioinformatics resource

Sujata Sinha, Michael L. Black, Sarita Agarwal, Reena Das, Alan H. Bittles, Matthew Bellgard

Journal:

Year:

2011

Language:

english

File:

PDF, 294 KB

english, 2011

8

The topsoil as the major store of the propagules of vesicular-arbuscular mycorrhizal fungi in southeast Australian sandstone soils

Journal:

Year:

1993

Language:

english

File:

PDF, 694 KB

english, 1993

9

Soil disturbance and infection ofTrifolium repensroots by vesicular-arbuscular mycorrhizal fungi

Journal:

Year:

1993

Language:

english

File:

PDF, 557 KB

english, 1993

10

Dynamic Evolution of Genomes and the Concept of Genome Space

MATTHEW I. BELLGARD, TAKESHI ITOH, HIDEMI WATANABE, TADASHI IMANISHI, TAKASHI GOJOBORI

Journal:

Annals of the New York Academy of Sciences

Year:

1999

File:

PDF, 1.33 MB

1999

11

A novel mutation causing nephronophthisis in the Lewis polycystic kidney rat localises to a conserved RCC1 domain in Nek8

McCooke, John K, Appels, Rudi, Barrero, Roberto A, Ding, Alice, Ozimek-Kulik, Justyna E, Bellgard, Mathew I, Morahan, Grant, Phillips, Jacqueline K

Journal:

Year:

2012

Language:

english

File:

PDF, 1.43 MB

english, 2012

12

Wheat genome structure and function: genome sequence data and the International Wheat Genome Sequencing Consortium

Moolhuijzen, P., Dunn, D. S., Bellgard, M., Carter, M., Jia, J., Kong, X., Gill, B. S., Feuillet, C., Breen, J., Appels, R.

Journal:

Australian Journal of Agricultural Research

Year:

2007

Language:

english

File:

PDF, 383 KB

english, 2007

13

Metabarcoding avian diets at airports: implications for birdstrike hazard management planning

Coghlan, Megan L, White, Nicole E, Murray, Dáithí C, Houston, Jayne, Rutherford, William, Bellgard, Matthew I, Haile, James, Bunce, Michael

Journal:

Investigative Genetics

Year:

2013

Language:

english

File:

PDF, 633 KB

english, 2013

14

The mitochondrial genome of a Texas outbreak strain of the cattle tick, Rhipicephalus (Boophilus) microplus, derived from whole genome sequencing Pacific Biosciences and Illumina reads

McCooke, John K., Guerrero, Felix D., Barrero, Roberto A., Black, Michael, Hunter, Adam, Bell, Callum, Schilkey, Faye, Miller, Robert J., Bellgard, Matthew I.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.20 MB

english, 2015

15

Genome Sequences of Six Wheat-Infecting Fusarium Species Isolates

Moolhuijzen, P. M., Manners, J. M., Wilcox, S. A., Bellgard, M. I., Gardiner, D. M.

Journal:

Genome Announcements

Year:

2013

Language:

english

File:

PDF, 141 KB

english, 2013

16

A web-based, patient driven registry for Angelman syndrome: the global Angelman syndrome registry

Napier, Kathryn R., Tones, Megan, Simons, Chloe, Heussler, Helen, Hunter, Adam A., Cross, Meagan, Bellgard, Matthew I.

Journal:

Orphanet Journal of Rare Diseases

Year:

2017

Language:

english

File:

PDF, 541 KB

english, 2017

17

RD-RAP: beyond rare disease patient registries, devising a comprehensive data and analytic framework

Bellgard, Matthew I., Snelling, Tom, McGree, James M.

Journal:

Orphanet Journal of Rare Diseases

Year:

2019

Language:

english

File:

PDF, 930 KB

english, 2019

18

RD-RAP: beyond rare disease patient registries, devising a comprehensive data and analytic framework

Bellgard, Matthew I., Snelling, Tom, McGree, James M.

Journal:

Orphanet Journal of Rare Diseases

Year:

2019

File:

PDF, 930 KB

2019

19

Suppressive subtractive hybridization analysis of Rhipicephalus (Boophilus) microplus larval and adult transcript expression during attachment and feeding

Ala E. Lew-Tabor, Paula M. Moolhuijzen, Megan E. Vance, Sebastian Kurscheid, Manuel Rodriguez Valle, Sandra Jarrett, Catherine M. Minchin, Louise A. Jackson, Nick N. Jonsson, Matthew I. Bellgard, Feli

Journal:

Veterinary Parasitology

Year:

2010

Language:

english

File:

PDF, 1.15 MB

english, 2010

20

Polymorphic Alu Insertions and their Associations with MHC Class I Alleles and Haplotypes in the Northeastern Thais

D. S. Dunn, A. V. Romphruk, C. Leelayuwat, M. Bellgard, J. K. Kulski

Journal:

Annals of Human Genetics

Year:

2005

Language:

english

File:

PDF, 132 KB

english, 2005

21

Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tickRhipicephalus (Boophilus) microplus

Roberto A Barrero, Gabriel Keeble-Gagnère, Bing Zhang, Paula Moolhuijzen, Kazuho Ikeo, Yoshio Tateno, Takashi Gojobori, Felix D Guerrero, Ala Lew-Tabor, Matthew Bellgard

Journal:

Year:

2011

Language:

english

File:

PDF, 3.44 MB

english, 2011

22

De novo assembly ofEuphorbia fischerianaroot transcriptome identifies prostratin pathway related genes

Roberto A Barrero, Brett Chapman, Yanfang Yang, Paula Moolhuijzen, Gabriel Keeble-Gagnère, Nan Zhang, Qi Tang, Matthew I Bellgard, Deyou Qiu

Journal:

Year:

2011

Language:

english

File:

PDF, 604 KB

english, 2011

23

Evidence of a tick RNAi pathway by comparative genomics and reverse genetics screen of targets with known loss-of-function phenotypes inDrosophila

Sebastian Kurscheid, Ala E Lew-Tabor, Manuel Rodriguez Valle, Anthea G Bruyeres, Vivienne J Doogan, Ulrike G Munderloh, Felix D Guerrero, Roberto A Barrero, Matthew I Bellgard

Journal:

BMC Molecular Biology

Year:

2009

Language:

english

File:

PDF, 1.40 MB

english, 2009

24

The propagules of vesicular-arbuscular mycorrhizal (VAM) fungi capable of initiating VAM infection after topsoil disturbance

Journal:

Year:

1992

Language:

english

File:

PDF, 650 KB

english, 1992

25

The Evolution of MHC Diversity by Segmental Duplication and Transposition of Retroelements

Jerzy K. Kulski, Silvana Gaudieri, Matthew Bellgard, Lois Balmer, Keith Giles, Hidetoshi Inoko, Roger L. Dawkins

Journal:

Journal of Molecular Evolution

Year:

1998

Language:

english

File:

PDF, 8 KB

english, 1998

26

Gene expression profiling of Japanese psoriatic skin reveals an increased activity in molecular stress and immune response signals

Jerzy K. Kulski, William Kenworthy, Matthew Bellgard, Ross Taplin, Koichi Okamoto, Akira Oka, Tomotaka Mabuchi, Akira Ozawa, Gen Tamiya, Hidetoshi Inoko

Journal:

Journal of Molecular Medicine

Year:

2005

Language:

english

File:

PDF, 222 KB

english, 2005

27

Genomic and Phylogenetic Analysis of the S100A7 (Psoriasin) Gene Duplications Within the Region of the S100 Gene Cluster on Human Chromosome 1q21

Jerzy K. Kulski, Chew Ping K. Lim, David S. Dunn, Matthew Bellgard

Journal:

Journal of Molecular Evolution

Year:

2003

Language:

english

File:

PDF, 605 KB

english, 2003

28

Early Detection of G + C Differences in Bacterial Species Inferred from the Comparative Analysis of the Two Completely SequencedHelicobacter pyloriStrains

Matthew Bellgard, David Schibeci, Edward Trifonov, Takashi Gojobori

Journal:

Journal of Molecular Evolution

Year:

2001

Language:

english

File:

PDF, 913 KB

english, 2001

29

Intragenic Variation of Synonymous Substitution Rates Is Caused by Nonrandom Mutations at Methylated CpG

Kazuhisa Tsunoyama, Matthew I. Bellgard, Takashi Gojobori

Journal:

Journal of Molecular Evolution

Year:

2001

Language:

english

File:

PDF, 2.55 MB

english, 2001

30

Mesophilic Actinomycetes in the Natural and Reconstructed Sand Dune Vegetation Zones of Fraser Island, Australia

D. I. Kurtböke, R. J. Neller, S. E. Bellgard

Journal:

Microbial Ecology

Year:

2007

Language:

english

File:

PDF, 371 KB

english, 2007

31

The bioinformatics challenges in comparative analysis of cereal genomes—an overview

M. Bellgard, Jia Ye, T. Gojobori, R. Appels

Journal:

Functional & Integrative Genomics

Year:

2004

Language:

english

File:

PDF, 501 KB

english, 2004

32

Genes controlling seed dormancy and pre-harvest sprouting in a rice-wheat-barley comparison

Chengdao Li, Peixiang Ni, Michael Francki, Adam Hunter, Yong Zhang, David Schibeci, Heng Li, Allen Tarr, Jun Wang, Mehmet Cakir, Jun Yu, Matthew Bellgard, Reg Lance, Rudi Appels

Journal:

Functional & Integrative Genomics

Year:

2004

Language:

english

File:

PDF, 494 KB

english, 2004

33

Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophyll content in wheat

Michael Francki, Meredith Carter, Karon Ryan, Adam Hunter, Matthew Bellgard, Rudi Appels

Journal:

Functional & Integrative Genomics

Year:

2004

Language:

english

File:

PDF, 1.40 MB

english, 2004

34

Looking through genomics—from the editors

R. Appels, M. Bellgard

Journal:

Functional & Integrative Genomics

Year:

2005

Language:

english

File:

PDF, 71 KB

english, 2005

35

Ten years of bacterial genome sequencing: comparative-genomics-based discoveries

Tim T. Binnewies, Yair Motro, Peter F. Hallin, Ole Lund, David Dunn, Tom La, David J. Hampson, Matthew Bellgard, Trudy M. Wassenaar, David W. Ussery

Journal:

Functional & Integrative Genomics

Year:

2006

Language:

english

File:

PDF, 827 KB

english, 2006

36

GA-20 oxidase as a candidate for the semidwarf genesdw1/densoin barley

Qiaojun Jia, Jingjuan Zhang, Sharon Westcott, Xiao-Qi Zhang, Mathew Bellgard, Reg Lance, Chengdao Li

Journal:

Functional & Integrative Genomics

Year:

2009

Language:

english

File:

PDF, 255 KB

english, 2009

37

Advances in genome studies: the PAG 2010 conference

R. Appels, R. Barrerro, G. Keeble, M. Bellgard

Journal:

Functional & Integrative Genomics

Year:

2010

Language:

english

File:

PDF, 303 KB

english, 2010

38

The transcript repeat element: the human Alu sequence as a component of gene networks influencing cancer

Paula Moolhuijzen, Jerzy K. Kulski, David S. Dunn, David Schibeci, Roberto Barrero, Takashi Gojobori, Matthew Bellgard

Journal:

Functional & Integrative Genomics

Year:

2010

Language:

english

File:

PDF, 401 KB

english, 2010

39

Diverse approaches to achieving grain yield in wheat

Roberto A. Barrero, Matthew Bellgard, Xueyong Zhang

Journal:

Functional & Integrative Genomics

Year:

2011

Language:

english

File:

PDF, 1.11 MB

english, 2011

40

Genome studies at the PAG 2011 conference

R. Appels, D. L. Adelson, P. Moolhuijzen, H. Webster, R. Barrero, M. Bellgard

Journal:

Functional & Integrative Genomics

Year:

2011

Language:

english

File:

PDF, 383 KB

english, 2011

41

BAC-derived markers for assaying the stem rust resistance gene,Sr2, in wheat breeding programs

M. D. McNeil, R. Kota, E. Paux, D. Dunn, R. McLean, C. Feuillet, D. Li, X. Kong, E. Lagudah, J. C. Zhang, J. Z. Jia, W. Spielmeyer, M. Bellgard, R. Appels

Journal:

Molecular Breeding

Year:

2008

Language:

english

File:

PDF, 372 KB

english, 2008

42

Profiling β-thalassaemia mutations in India at state and regional levels: implications for genetic education, screening and counselling programmes

S. Sinha, M. L. Black, S. Agarwal, R. Colah, R. Das, K. Ryan, M. Bellgard, A. H. Bittles

Journal:

The HUGO Journal

Year:

2009

Language:

english

File:

PDF, 859 KB

english, 2009

43

A descriptive profile of β-thalassaemia mutations in India, Pakistan and Sri Lanka

M. L. Black, S. Sinha, S. Agarwal, R. Colah, R. Das, M. Bellgard, A. H. Bittles

Journal:

Journal of Community Genetics

Year:

2010

Language:

english

File:

PDF, 1.58 MB

english, 2010

44

A Bioinformatics Framework for plant pathologists to deliver global food security outcomes

Matthew I. Bellgard, Stanley E. Bellgard

Journal:

Australasian Plant Pathology

Year:

2012

Language:

english

File:

PDF, 518 KB

english, 2012

45

Understanding dispersal rates of invading weed biocontrol agents

Quentin Paynter, Stan Bellgard

Journal:

Journal of Applied Ecology

Year:

2011

Language:

english

File:

PDF, 387 KB

english, 2011

46

Isolation of Phytophthora lateralis from Chamaecyparis foliage in Taiwan

J. F. Webber, A. M. Vettraino, T. T. Chang, S.E. Bellgard, C. M. Brasier, A. Vannini

Journal:

Forest Pathology

Year:

2012

Language:

english

File:

PDF, 774 KB

english, 2012

47

[AIP COMPUTATIONAL MODELS FOR LIFE SCIENCES/CMLS '07 - ()] AIP Conference Proceedings - A Bioinformatics Reference Model: Towards a Framework for Developing and Organising Bioinformatic Resources

Hiew, Hong Liang, Bellgard, Matthew, Pham, Tuan D., Zhou, Xiaobo

Year:

2007

Language:

english

File:

PDF, 986 KB

english, 2007

48

A modular approach to disease registry design: Successful adoption of an internet-based rare disease registry

Matthew I Bellgard, Andrew Macgregor, Fred Janon, Adam Harvey, Peter O'Leary, Adam Hunter, Hugh Dawkins

Journal:

Year:

2012

Language:

english

File:

PDF, 738 KB

english, 2012

49

The Evolution of MHC Diversity by Segmental Duplication and Transposition of Retroelements

Kulski, Jerzy K., Gaudieri, Silvana, Bellgard, Matthew, Balmer, Lois, Giles, Keith, Inoko, Hidetoshi, Dawkins, Roger L.

Journal:

Journal of Molecular Evolution

Year:

1997

Language:

english

File:

PDF, 1.87 MB

english, 1997

50

Gene expression evidence for off-target effects caused by RNA interference-mediated gene silencing of Ubiquitin-63E in the cattle tick Rhipicephalus microplus

A.E. Lew-Tabor, S. Kurscheid, R. Barrero, C. Gondro, P.M. Moolhuijzen, M. Rodriguez Valle, J.A.T. Morgan, C. Covacin, M.I. Bellgard

Journal:

International Journal for Parasitology

Year:

2011

Language:

english

File:

PDF, 525 KB

english, 2011