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51

Complex Kinetics of Apobec3g Interaction with Single-Stranded Nucleic Acids

Rouzina, Ioulia, Qualley, Dominic F., Wu, Tiyun, Iwatani, Yasumasa, Chan, Denise S.B., Hertz, Amber, Chaurasiya, Kathy, Levin, Judith G., Williams, Mark C., Musier-Forsyth, Karin

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 39 KB

english, 2011

52

HIV-Integrase Aptamer Folds into a Parallel Quadruplex: A Thermodynamic Study

Kelly, Sean, Boroda, Salome, Musier-Forsyth, Karin, Kankia, Besik

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 38 KB

english, 2011

53

Real-time Optical Assay For Monitoring Nucleic Acid Strand-exchange And Cleavage

Kankia, Besik I., Musier-Forsyth, Karin

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 41 KB

english, 2009

54

Fret-Based Approach to Probe Domain Motions upon ProRS/YbaK/tRNA_Pro Ternary Complex Formation

de Silva, Chamaree, Bakhtina, Marina, Musier-Forsyth, Karin

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 38 KB

english, 2013

55

Nucleic Acid Chaperone Activity Transforms the Energy Landscape of HIV-1 TAR RNA

McCauley, Micah J., Rouzina, Ioulia, Hoadley, Kelly, Gorelick, Robert J., Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 37 KB

english, 2013

56

Nucleocapsid Protein Locally Melts The Iib Region Of Hiv-1 Rre Rna, But Rev Protein Does Not: A Single-molecule Spectroscopic Study

Yeh, Yu-shan, Wang, Hui, Barbara, Paul F., Daugherty, Matthew D., Frankel, Alan D., Musier-Forsyth, Karin

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 80 KB

english, 2009

57

Nucleic Acid Binding Properties of HIV-1 Gag Polyprotein and its Proteolytic Processing Intermediates Studied by Single Molecule DNA Stretching

Li, Jialin, Williams, Mark C., Jones, Chrisopher, Musier-Forsyth, Karin, Datta, Siddhartha A.K., Rein, Alan, Gorelick, Robert J., Rouzina, Ioulia

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 37 KB

english, 2011

58

Oligomerization of HIV-1 Restriction Factor APOBEC3G Transforms it from a Fast Enzyme to a Slow Nucleic Acid Binding Protein

Chaurasiya, Kathy R., Geertsema, Hylkje, Qualley, Dominic F., Wu, Tiyun, Iwatani, Yasumasa, Chan, Denise, Hertz, Amber, Levin, Judith G., Musier-Forsyth, Karin, Rouzina, Ioulia, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

59

Thermal stability of quadruplex primers for highly versatile isothermal DNA amplification

Mathias, Jordan, Okyere, Robert, Lomidze, Levan, Gvarjaladze, David, Musier-Forsyth, Karin, Kankia, Besik

Journal:

Biophysical Chemistry

Year:

2014

Language:

english

File:

PDF, 477 KB

english, 2014

60

NO MORE JELLY?

Mathias, Jordan, Okyere, Robert, Lomidze, Levan, Gvarjaladze, David, Musier-Forsyth, Karin, Kankia, Besik

Journal:

Year:

1965

Language:

english

File:

PDF, 344 KB

english, 1965

61

HIV-1 NC Protein Modifies Opening and Closing Kinetics of TAR RNA Hairpin

McCauley, Micah J., Rouzina, Ioulia, Hoadley, Kelly, Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 38 KB

english, 2011

62

Replacement of a Single Aromatic Residue in HIV-1 Nucleocapsid Protein Strongly Alters its Nucleic Acid Chaperone Activity

Wu, Hao, McCauley, Micah J., Gorelick, Robert J., Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 36 KB

english, 2010

63

DNA Interactions Kinetics of HIV-1 Nucleocapsid Proteins by Single Molecule DNA Stretching

Li, Jialin, Gorelick, Robert, Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 40 KB

english, 2012

64

Isothermal quadruplex priming amplification for DNA-based diagnostics

Taylor, Adam, Joseph, Anupama, Okyere, Robert, Gogichaishvili, Shota, Musier-Forsyth, Karin, Kankia, Besik

Journal:

Biophysical Chemistry

Year:

2013

Language:

english

File:

PDF, 562 KB

english, 2013

65

Specific Basic and Aromatic Residues Optimize the Nucleic Acid Chaperone Activity of HIV-1 Nucleocapsid Protein

Wu, Hao, McCauley, Micah, Gorelick, Robert, Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 43 KB

english, 2011

66

Aromatic residue mutations reveal direct correlation between HIV-1 nucleocapsid protein's nucleic acid chaperone activity and retroviral replication

Wu, Hao, Mitra, Mithun, McCauley, Micah J., Thomas, James A., Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark C., Gorelick, Robert J.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.36 MB

english, 2013

67

DNA Interaction Kinetics of HIV-1 Nucleocapsid and Gag Proteins

Li, Jialin, Jones, Christopher, Datta, Siddhartha A., Rein, Alan, Gorelick, Robert J., Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 36 KB

english, 2010

68

Specific Atomic Groups and RNA Helix Geometry in Acceptor Stem Recognition by a tRNA Synthetase

Penny J. Beuning, Fan Yang, Paul Schimmel and Karin Musier-Forsyth

Journal:

Proceedings of the National Academy of Sciences

Year:

1997

Language:

english

File:

PDF, 755 KB

english, 1997

69

The Nucleocapsid Protein Specifically Anneals tRNALys-3onto a Noncomplementary Primer Binding site within the HIV-1 RNA Genome in vitro

Barden Chan and Karin Musier-Forsyth

Journal:

Proceedings of the National Academy of Sciences

Year:

1997

Language:

english

File:

PDF, 1.53 MB

english, 1997

70

Intra-tRNA Distance Measurements for Nucleocapsid Protein-Dependent tRNA Unwinding during Priming of HIV Reverse Transcription

Barden Chan, Kristin Weidemaier, Wai-Tak Yip, Paul F. Barbara and Karin Musier-Forsyth

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.76 MB

english, 1999

71

DNA-Templated Self-Assembly of Metallic Nanocomponent Arrays on a Surface

Le, John D., Pinto, Yariv, Seeman, Nadrian C., Musier-Forsyth, Karin, Taton, T. Andrew, Kiehl, Richard A.

Journal:

Year:

2004

Language:

english

File:

PDF, 584 KB

english, 2004

72

Structural biology: Wobble puts RNA on target

Vargas-Rodriguez, Oscar, Musier-Forsyth, Karin

Journal:

Year:

2014

Language:

english

File:

PDF, 863 KB

english, 2014

73

Single aromatic residue location alters nucleic acid binding and chaperone function of FIV nucleocapsid protein

Wu, Hao, Wang, Wei, Naiyer, Nada, Fichtenbaum, Eric, Qualley, Dominic F., McCauley, Micah J., Gorelick, Robert J., Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.02 MB

english, 2014

74

The Arabidopsis thaliana tandem zinc finger 1 (AtTZF1) protein in RNA binding and decay

Qu, Jie, Kang, Shin Gene, Wang, Wei, Musier-Forsyth, Karin, Jang, Jyan-Chyun

Journal:

The Plant Journal

Year:

2014

Language:

english

File:

PDF, 1.37 MB

english, 2014

75

Strictly Conserved Lysine of Prolyl-tRNA Synthetase Editing Domain Facilitates Binding and Positioning of Misacylated tRNA Pro

Bartholow, Thomas G., Sanford, Brianne L., Cao, Bach, Schmit, Heidi L., Johnson, James M., Meitzner, Jet, Bhattacharyya, Sudeep, Musier-Forsyth, Karin, Hati, Sanchita

Journal:

Year:

2014

Language:

english

File:

PDF, 2.13 MB

english, 2014

76

Base-analog-induced aminoacylation of an RNA helix by a tRNA synthetase

Musier-Forsyth, Karin, Shi, J.-P., Henderson, Barry, Bald, Rolf, Fuerste, Jens Peter, Erdmann, Volker A., Schimmel, Paul

Journal:

Journal of the American Chemical Society

Year:

1995

Language:

english

File:

PDF, 652 KB

english, 1995

77

Does Active Learning through an Antisense Jigsaw Make Sense?

Seetharaman, Mahadevan, Musier-Forsyth, Karin

Journal:

Journal of Chemical Education

Year:

2003

Language:

english

File:

PDF, 98 KB

english, 2003

78

Evidence for Non-Two-State Kinetics in the Nucleocapsid Protein Chaperoned Opening of DNA Hairpins

Cosa, Gonzalo, Zeng, Yining, Liu, Hsiao-Wei, Landes, Christy F., Makarov, Dmitrii E., Musier-Forsyth, Karin, Barbara, Paul F.

Journal:

Journal of Physical Chemistry B

Year:

2006

Language:

english

File:

PDF, 230 KB

english, 2006

79

Single Atomic Group in RNA Helix Needed for Positive and Negative tRNA Synthetase Discrimination

Liu, Hongjian, Yap, Li-Ping, Musier-Forsyth, Karin

Journal:

Journal of the American Chemical Society

Year:

1996

Language:

english

File:

PDF, 79 KB

english, 1996

80

Sequence-Encoded Self-Assembly of Multiple-Nanocomponent Arrays by 2D DNA Scaffolding

Pinto, Yariv Y., Le, John D., Seeman, Nadrian C., Musier-Forsyth, Karin, Taton, T. Andrew, Kiehl, Richard A.

Journal:

Year:

2005

Language:

english

File:

PDF, 650 KB

english, 2005

81

Atomic Determinants for Aminoacylation of RNA Minihelices and Relationship to Genetic Code

Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Accounts of Chemical Research

Year:

1999

Language:

english

File:

PDF, 203 KB

english, 1999

82

Wild-Type RNA Microhelix Ala and 3:70 Variants: Molecular Dynamics Analysis of Local Helical Structure and Tightly Bound Water

Nagan, Maria C., Kerimo, Stephanie S., Musier-Forsyth, Karin, Cramer, Christopher J.

Journal:

Journal of the American Chemical Society

Year:

1999

Language:

english

File:

PDF, 163 KB

english, 1999

83

Region of a Conserved Sequence Motif in a Class II tRNA Synthetase Needed for Transfer of an Activated Amino Acid to an RNA Substrate

Shi, Jian-Ping, Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Year:

1994

Language:

english

File:

PDF, 1.67 MB

english, 1994

84

Single-Molecule Spectroscopic Study of Dynamic Nanoscale DNA Bending Behavior of HIV-1 Nucleocapsid Protein

Wang, Hui, Musier-Forsyth, Karin, Falk, Caroline, Barbara, Paul F.

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 7.47 MB

english, 2013

85

G−1:C73 Recognition by an Arginine Cluster in the Active Site of Escherichia coli Histidyl-tRNA Synthetase †

Connolly, Susan A., Rosen, Abbey E., Musier-Forsyth, Karin, Francklyn, Christopher S.

Journal:

Year:

2004

Language:

english

File:

PDF, 169 KB

english, 2004

86

Single-Molecule Fluorescence Using Nucleotide Analogs: A Proof-of-Principle

Alemán, Elvin A., de Silva, Chamaree, Patrick, Eric M., Musier-Forsyth, Karin, Rueda, David

Journal:

The Journal of Physical Chemistry Letters

Year:

2014

Language:

english

File:

PDF, 1.59 MB

english, 2014

87

Acceptor Helix Interactions in a Class II tRNA Synthetase: Photoaffinity Crosslinking of an RNA Miniduplex Substrate

Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Year:

1994

Language:

english

File:

PDF, 2.26 MB

english, 1994

88

Evidence for class-specific discrimination of a semiconserved base pair by tRNA synthetases

Liu, Hongjian, Kessler, Jason, Peterson, Richard, Musier-Forsyth, Karin

Journal:

Year:

1995

Language:

english

File:

PDF, 2.46 MB

english, 1995

89

Capillary Electrophoretic Separation of Nuclei Released from Single Cells

Gunasekera, Nilhan, Olson, Karen J., Musier-Forsyth, Karin, Arriaga, Edgar A.

Journal:

Analytical Chemistry

Year:

2004

Language:

english

File:

PDF, 162 KB

english, 2004

90

Escherichia coli Proline tRNA Synthetase Is Sensitive to Changes in the Core Region of tRNAPro

Liu, Hongjian, Musier-Forsyth, Karin

Journal:

Year:

1994

Language:

english

File:

PDF, 2.88 MB

english, 1994

91

Single-Molecule Study of the Inhibition of HIV-1 Transactivation Response Region DNA/DNA Annealing by Argininamide

Landes, Christy F., Zeng, Yining, Liu, Hsiao-Wei, Musier-Forsyth, Karin, Barbara, Paul F.

Journal:

Journal of the American Chemical Society

Year:

2007

Language:

english

File:

PDF, 387 KB

english, 2007

92

Progress and outlook in structural biology of large viral RNAs

Cantara, William A., Olson, Erik D., Musier-Forsyth, Karin

Journal:

Year:

2014

Language:

english

File:

PDF, 1.56 MB

english, 2014

93

Nuclear Localization of Aminoacyl-tRNA Synthetases Using Single-Cell Capillary Electrophoresis Laser-Induced Fluorescence Analysis

Gunasekera, Nilhan, Lee, Sang Won, Kim, Sunghoon, Musier-Forsyth, Karin, Arriaga, Edgar

Journal:

Analytical Chemistry

Year:

2004

Language:

english

File:

PDF, 91 KB

english, 2004

94

Atomic Group “Mutagenesis” Reveals Major Groove Fine Interactions of a tRNA Synthetase with an RNA Helix

Beuning, Penny J., Gulotta, Miriam, Musier-Forsyth, Karin

Journal:

Journal of the American Chemical Society

Year:

1997

Language:

english

File:

PDF, 215 KB

english, 1997

95

Subtle Functional Interactions in the RNA Minor Groove at a Nonessential Base Pair

Henderson, Barry S., Beuning, Penny J., Shi, J.-P., Bald, Rolf, Fürste, Jens Peter, Erdmann, Volker A., Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Journal of the American Chemical Society

Year:

1998

Language:

english

File:

PDF, 97 KB

english, 1998

96

The N-Terminal Zinc Finger and Flanking Basic Domains Represent the Minimal Region of the Human Immunodeficiency Virus Type-1 Nucleocapsid Protein for Targeting Chaperone Function

Mitra, Mithun, Wang, Wei, Vo, My-Nuong, Rouzina, Ioulia, Barany, George, Musier-Forsyth, Karin

Journal:

Year:

2013

Language:

english

File:

PDF, 1.19 MB

english, 2013

97

Rotational dynamics of chloroplast ATP synthase in phospholipid vesicles

Musier-Forsyth, Karin M., Hammes, Gordon G.

Journal:

Year:

1990

Language:

english

File:

PDF, 794 KB

english, 1990

98

Chemical Modification and Site-Directed Mutagenesis of the Single Cysteine in Motif 3 of Class II Escherichia coli Prolyl-tRNA Synthetase †

Stehlin, Catherine, Heacock, Donald H., Liu, Hongjian, Musier-Forsyth, Karin

Journal:

Year:

1997

Language:

english

File:

PDF, 184 KB

english, 1997

99

Foreword

Berkhout, Ben, Mouland, Andrew J., Musier-Forsyth, Karin

Journal:

Year:

2014

Language:

english

File:

PDF, 122 KB

english, 2014

100

Small-angle X-ray scattering-derived structure of the HIV-1 5′ UTR reveals 3D tRNA mimicry

Jones, Christopher P., Cantara, William A., Olson, Erik D., Musier-Forsyth, Karin

Journal:

Proceedings of the National Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 1.15 MB

english, 2014