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101

Complementary sets of noncanonical base pairs mediate RNA helix packing in the group I intron active site

Strobel, Scott A., Ortoleva-Donnelly, Lori, Ryder, Sean P., Cate, Jamie H., Moncoeur, Eileen

Journal:

Natural Structural Biology

Year:

1998

File:

PDF, 888 KB

1998

102

Component processes underlying future thinking

Arnaud D’Argembeau, Claudia Ortoleva, Sabrina Jumentier, Martial Van der Linden

Journal:

Memory & Cognition

Year:

2010

Language:

english

File:

PDF, 160 KB

english, 2010

103

[Society of Petroleum Engineers International Symposium on Oilfield Chemistry - (1997.02.18-1997.02.21)] Proceedings of International Symposium on Oilfield Chemistry - Reaction-Transport Simulation of Matrix Acidizing and Optimal Acidizing Strategies

Chen, Yueting, Fambrough, John, Bartko, Kirk, Li, Ying, Montgomery, Carl, Ortoleva, Peter

Year:

1997

File:

PDF, 337 KB

1997

104

Solute reaction mediated precipitate patterns in cross gradient free systems

Journal:

Zeitschrift für Physik B Condensed Matter

Year:

1982

Language:

english

File:

PDF, 665 KB

english, 1982

105

Evolution of the Gouge Particle Size Distribution: A Markov Model

Ozkan, G., Ortoleva, P. J.

Journal:

Pure and Applied Geophysics

Year:

2000

Language:

english

File:

PDF, 301 KB

english, 2000

106

Enveloped viruses understood via multiscale simulation: computer-aided vaccine design

Z. Shreif, P. Adhangale, S. Cheluvaraja, R. Perera, R. Kuhn, P. Ortoleva

Journal:

Scientific Modeling and Simulation SMNS

Year:

2008

Language:

english

File:

PDF, 412 KB

english, 2008

107

Temperature-programmed desorption study of ammonia desorption-diffusion in molecular sieves: II. Application to partially decationated Y-zeolites

Lucio Forni, Enrico Magni, Emanuele Ortoleva, Roberto Monaci, Vincenzo Solinas

Journal:

Journal of Catalysis

Year:

1988

Language:

english

File:

PDF, 660 KB

english, 1988

108

Application of the Wood model to lactation curves of Comisana sheep

B. Portolano, F. Spatafora, G. Bono, S. Margiotta, M. Todaro, V. Ortoleva, G. Leto

Journal:

Small Ruminant Research

Year:

1997

Language:

english

File:

PDF, 560 KB

english, 1997

109

Modeling biogeochemical dynamics in porous media: Practical considerations of pore scale variability, reaction networks, and microbial population dynamics in a sandy aquifer

E.L. King, K. Tuncay, P. Ortoleva, C. Meile

Journal:

Journal of Contaminant Hydrology

Year:

2010

Language:

english

File:

PDF, 610 KB

english, 2010

110

In-situ probing of near and below sputter-threshold ion-induced nanopatterning on GaSb(1 0 0)

O. El-Atwani, J.P. Allain, S. Ortoleva

Journal:

Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms

Year:

2012

Language:

english

File:

PDF, 820 KB

english, 2012

111

Multiscale simulation of microbe structure and dynamics

Harshad Joshi, Abhishek Singharoy, Yuriy V. Sereda, Srinath C. Cheluvaraja, Peter J. Ortoleva

Journal:

Progress in Biophysics and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.90 MB

english, 2011

112

Deriving principles of microbiology by multiscaling laws of molecular physics

Ortoleva, P., Adhangale, P., Cheluvaraja, S., Fontus, M., Shreif, Z.

Journal:

IEEE Engineering in Medicine and Biology Magazine

Year:

2009

Language:

english

File:

PDF, 1.25 MB

english, 2009

113

Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and information theory

Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J Ortoleva

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.15 MB

english, 2007

114

Geochemical self-organization

Journal:

Chemical Geology

Year:

1988

Language:

english

File:

PDF, 80 KB

english, 1988

115

Cellular and oscillatory self-induced methane migration

A. Park, T. Dewers, P. Ortoleva

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 1.16 MB

english, 1990

116

Differentiated structures arising from mechano-chemical feedback in stressed rocks

Thomas Dewers, Peter Ortoleva

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 1.38 MB

english, 1990

117

Oscillatory methane release from shale source rock

A. Ghaith, W. Chen, P. Ortoleva

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 381 KB

english, 1990

118

Preface

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 62 KB

english, 1990

119

Bifurcation of the Ostwald-Liesegang supersaturation-nucleation-depletion cycle

R. Sultan, P. Ortoleva, F. DePasquale, P. Tartaglia

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 679 KB

english, 1990

120

Reaction front fingering in carbonate-cemented sandstones

Chen Wei, Peter Ortoleva

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 1.10 MB

english, 1990

121

Role of attachment kinetic feedback in the oscillatory zoning of crystals grown from melts

Peter J. Ortoleva

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 436 KB

english, 1990

122

Morphological instabilities in physico-chemical systems

J. Chadam, P. Ortoleva

Journal:

Earth-Science Reviews

Year:

1990

Language:

english

File:

PDF, 483 KB

english, 1990

123

An Approach to Consistent Patient Education

Catherine Ortoleva

Journal:

Year:

2010

Language:

english

File:

PDF, 2.04 MB

english, 2010

124

Status quo bias, multiple priors and uncertainty aversion

Pietro Ortoleva

Journal:

Games and Economic Behavior

Year:

2010

Language:

english

File:

PDF, 341 KB

english, 2010

125

A molecular dynamics study of loop fluctuation in human papillomavirus type 16 virus-like particles: A possible indicator of immunogenicity

Harshad Joshi, Srinath Cheluvaraja, Endre Somogyi, Darron R. Brown, Peter Ortoleva

Journal:

Year:

2011

Language:

english

File:

PDF, 994 KB

english, 2011

126

Sedimentary basin deformation: an incremental stress approach

K. Tuncay, A. Park, P. Ortoleva

Journal:

Year:

2000

Language:

english

File:

PDF, 1.49 MB

english, 2000

127

Pressure solution in sandstones: influence of clays and dependence on temperature and stress

François Renard, Peter Ortoleva, Jean Pierre Gratier

Journal:

Year:

1997

Language:

english

File:

PDF, 2.06 MB

english, 1997

128

An integrated model for transitional pressure solution in sandstones

F. Renard, A. Park, P. Ortoleva, J.-P. Gratier

Journal:

Year:

1999

Language:

english

File:

PDF, 997 KB

english, 1999

129

A model for lignin alteration—part I: a kinetic reaction-network model

D.F. Payne, P.J. Ortoleva

Journal:

Organic Geochemistry

Year:

2001

Language:

english

File:

PDF, 275 KB

english, 2001

130

A model for lignin alteration—part II: numerical model of natural gas generation and application to the Piceance Basin, Western Colorado

D.F. Payne, P.J. Ortoleva

Journal:

Organic Geochemistry

Year:

2001

Language:

english

File:

PDF, 775 KB

english, 2001

131

Interplay of gouge, fluid pressure and porosity in fault zones

Kagan Tuncay, Gonca Ozkan, Peter Ortoleva

Journal:

Journal of Geochemical Exploration

Year:

2003

Language:

english

File:

PDF, 355 KB

english, 2003

132

Exercise performance in hypertensives: felodipine vs cilazapril cross-over study

G. Parrinello, S. Paterna, A. Pinto, P. Amato, E. Capodieci, A. Tuttolomondo, T. Maniscalchi, A. Bova, V. Accardo Palumbo, A.M. Ortoleva, G. Licata

Journal:

American Journal of Hypertension

Year:

1999

Language:

english

File:

PDF, 26 KB

english, 1999

133

Multiscale Macromolecular Simulation: Role of Evolving Ensembles

Singharoy, A., Joshi, H., Ortoleva, P. J.

Journal:

Journal of Chemical Information and Modeling

Year:

2012

Language:

english

File:

PDF, 3.11 MB

english, 2012

134

Variational methods for time-dependent classical many-particle systems

Yuriy V. Sereda, Peter J. Ortoleva

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2013

Language:

english

File:

PDF, 335 KB

english, 2013

135

All-Atom Multiscale Simulation of Cowpea Chlorotic Mottle Virus Capsid Swelling

Miao, Yinglong, Johnson, John E., Ortoleva, Peter J.

Journal:

Journal of Physical Chemistry B

Year:

2010

Language:

english

File:

PDF, 800 KB

english, 2010

136

Water films at grain-grain contacts: Debye-Hückel, osmotic model of stress, salinity, and mineralogy dependence

François Renard, Peter Ortoleva

Journal:

Geochimica et Cosmochimica Acta

Year:

1997

Language:

english

File:

PDF, 1015 KB

english, 1997

137

Salt tectonics as a self-organizing process: A reaction, transport, and mechanics model

Tuncay, K., Ortoleva, P.

Journal:

Journal of Geophysical Research

Year:

2001

Language:

english

File:

PDF, 1.69 MB

english, 2001

138

Numerical modeling of reaction-induced cavities in a porous rock

Ormond, Anne, Ortoleva, Peter

Journal:

Journal of Geophysical Research

Year:

2000

Language:

english

File:

PDF, 1.15 MB

english, 2000

139

Salt tectonics as a self-organizing process: A reaction, transport, and mechanics model

K. Tuncay, P. Ortoleva

Journal:

Journal of Geophysical Research: Solid Earth

Year:

2001

Language:

english

File:

PDF, 1.69 MB

english, 2001

140

DISCUSSION PAPER: BIFURCATIONS AND PERTURBED ATTRACTORS IN PHYSICOCHEMICAL SYSTEMS

Journal:

Annals of the New York Academy of Sciences

Year:

1979

Language:

english

File:

PDF, 370 KB

english, 1979

141

Macromolecular Systems Understood through Multiscale and Enhanced Sampling Techniques

Ortoleva, Peter J., Keyes, Tom, Tuckerman, Mark

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 114 KB

english, 2012

142

Mechano-chemical coupling in stressed rocks

Thomas Dewers, Peter J. Ortoleva

Journal:

Geochimica et Cosmochimica Acta

Year:

1989

Language:

english

File:

PDF, 2.19 MB

english, 1989

143

A coupled reaction/transport/mechanical model for intergranular pressure solution, stylolites, and differential compaction and cementation in clean sandstones

T. Dewers, P. Ortoleva

Journal:

Geochimica et Cosmochimica Acta

Year:

1990

Language:

english

File:

PDF, 2.79 MB

english, 1990

144

A theoretical study of nitrogen adsorption and dissociation on iron and rhenium single crystals

Emanuele Ortoleva, (the late) Massimo Simonetta

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

1987

Language:

english

File:

PDF, 316 KB

english, 1987

145

A forward model of three-dimensional fracture orientation and characteristics

Tuncay, K., Park, A., Ortoleva, P.

Journal:

Journal of Geophysical Research

Year:

2000

Language:

english

File:

PDF, 1.62 MB

english, 2000

146

Self-organization during reactive fluid flow in a porous medium

Renard, F., Gratier, J.-P., Ortoleva, P., Brosse, E., Bazin, B.

Journal:

Geophysical Research Letters

Year:

1998

Language:

english

File:

PDF, 687 KB

english, 1998

147

Geometry and molecular parameters of 3,4-bis(dimethylamino)-3-cyclobutene-1,2-dione and its isomer bis(dimethylamino)squaraine. Combined study by IR spectroscopy, XRD and ab initio MO calculations

Lunelli, Bruno, Roversi, Pietro, Ortoleva, Emanuele, Destro, Riccardo

Journal:

Journal of the Chemical Society Faraday Transactions

Year:

1996

Language:

english

File:

PDF, 1.41 MB

english, 1996

148

Discovering Free Energy Basins for Macromolecular Systems via Guided Multiscale Simulation

Sereda, Yuriy V., Singharoy, Abhishek B., Jarrold, Martin F., Ortoleva, Peter J.

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 4.96 MB

english, 2012

149

Local Structures in Chemical Reactions with Heterogeneous Catalysis

Ortoleva, Peter

Journal:

The Journal of Chemical Physics

Year:

1972

Language:

english

File:

PDF, 584 KB

english, 1972

150

Revealing Electron Delocalization through the Source Function

Monza, Emanuele, Gatti, Carlo, Lo Presti, Leonardo, Ortoleva, Emanuele

Journal:

Journal of Physical Chemistry A

Year:

2011

Language:

english

File:

PDF, 1.97 MB

english, 2011