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1

Binding sites in membrane proteins – Diversity, druggability and prospects

Robert Adams, Catherine L. Worth, Stefan Guenther, Mathias Dunkel, Robert Lehmann, Robert Preissner

Journal:

European Journal of Cell Biology

Year:

2012

Language:

english

File:

PDF, 1.61 MB

english, 2012

2

Prediction of prolyl residues in cis-conformation in protein structures on the basis of the amino acid sequence

Cornelius Frömmel, Robert Preissner

Journal:

Year:

1990

Language:

english

File:

PDF, 502 KB

english, 1990

3

Natural products: sources and databases

F?llbeck, Melanie, Michalsky, Elke, Dunkel, Mathias, Preissner, Robert

Journal:

Natural Product Reports

Year:

2006

Language:

english

File:

PDF, 474 KB

english, 2006

4

The Catch-22 of Predicting hERG Blockade Using Publicly Accessible Bioactivity Data

Siramshetty, Vishal B., Chen, Qiaofeng, Devarakonda, Prashanth, Preissner, Robert

Journal:

Journal of Chemical Information and Modeling

Year:

2018

Language:

english

File:

PDF, 3.57 MB

english, 2018

5

BitterSweetForest: A Random Forest Based Binary Classifier to Predict Bitterness and Sweetness of Chemical Compounds

Banerjee, Priyanka, Preissner, Robert

Journal:

Frontiers in Chemistry

Year:

2018

Language:

english

File:

PDF, 1.76 MB

english, 2018

6

Norditerpenoids with Selective Anti-Cholinesterase Activity from the Roots of Perovskia atriplicifolia Benth

Ålusarczyk, Sylwester, Senol Deniz, F. Sezer, Abel, Renata, Pecio, Åukasz, PÃ©rez-SÃ¡nchez, Horacio, CerÃ³n-Carrasco, JosÃ© P., den-Haan, Helena, Banerjee, Priyanka, Preissner, Robert, KrzyÅ¼ak, Edw

Journal:

International Journal of Molecular Sciences

Year:

2020

File:

PDF, 1.14 MB

2020

7

CardioScape-II: the need to map cardiovascular funding patterns in Europe

Pries, Axel R, Vardas, Panos, Ballensiefen, Wolfgang, Cosentino, Francesco, Dunkel, Mathias, Guzik, Tomasz, Pearson, Jeremy, Preissner, Robert, Van de Werf, Frans, Wood, David

Journal:

Cardiovascular Research

Year:

2020

File:

PDF, 380 KB

2020

8

Photoactivation of an Inhibitor of the 12/15-Lipoxygenase Pathway

Stephan Herre, Torsten Schadendorf, Igor Ivanov, Christian Herrberger, Wencke Steinle, Karola Rück-Braun, Robert Preissner, Hartmut Kuhn

Journal:

Year:

2006

Language:

english

File:

PDF, 316 KB

english, 2006

9

Cover Picture: Photoactivation of an Inhibitor of the 12/15-Lipoxygenase Pathway (ChemBioChem 7/2006)

Stephan Herre, Torsten Schadendorf, Igor Ivanov, Christian Herrberger, Wencke Steinle, Karola Rück-Braun, Robert Preissner, Hartmut Kuhn

Journal:

Year:

2006

File:

PDF, 33 KB

2006

10

Comparison of 2D Similarity and 3D Superposition. Application to Searching a Conformational Drug Database.

Martin Thimm, Andrean Goede, Stefan Hougardy, Robert Preissner

Journal:

Year:

2004

File:

PDF, 7 KB

2004

11

Survivin minigene DNA vaccination is effective against neuroblastoma

Stefan Fest, Nicole Huebener, Matthias Bleeke, Tahir Durmus, Alexander Stermann, Anja Woehler, Bianca Baykan, Ana C. Zenclussen, Elke Michalsky, Ines S. Jaeger, Robert Preissner, Oliver Hohn, Silke We

Journal:

International Journal of Cancer

Year:

2009

Language:

english

File:

PDF, 2.33 MB

english, 2009

12

In silico screening of drug databases for TSE inhibitors

Stephan Lorenzen, Mathias Dunkel, Robert Preissner

Journal:

Year:

2005

Language:

english

File:

PDF, 311 KB

english, 2005

13

Computer-assisted identification of small-molecule Bcl-2 modulators

Melanie Füllbeck, Nina Gebhardt, Julia Hossbach, Peter T. Daniel, Robert Preissner

Journal:

Computational Biology and Chemistry

Year:

2009

Language:

english

File:

PDF, 1.11 MB

english, 2009

14

Conservation of cis prolyl bonds in proteins during evolution

Stephan Lorenzen, Björn Peters, Andrean Goede, Robert Preissner, Cornelius Frömmel

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2005

Language:

english

File:

PDF, 303 KB

english, 2005

15

Analysis and prediction of helix–helix interactions in membrane channels and transporters

Peter Werner Hildebrand, Stephan Lorenzen, Andrean Goede, Robert Preissner

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 179 KB

english, 2006

16

Docking without docking: ISEARCH—prediction of interactions using known interfaces

Stefan Günther, Patrick May, Andreas Hoppe, Cornelius Frömmel, Robert Preissner

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 245 KB

english, 2007

17

Enzymatic, expression and structural divergences among carboxylO-methyltransferases after gene duplication and speciation inNicotiana

Frank Hippauf, Elke Michalsky, Ruiqi Huang, Robert Preissner, Todd J. Barkman, Birgit Piechulla

Journal:

Plant Molecular Biology

Year:

2010

Language:

english

File:

PDF, 897 KB

english, 2010

18

Cellular Fingerprints: A Novel Approach Using Large-Scale Cancer Cell Line Data for the Identification of Potential Anticancer Agents

Melanie Füllbeck, Mathias Dunkel, Julia Hossbach, Peter T. Daniel, Robert Preissner

Journal:

Chemical Biology & Drug Design

Year:

2009

Language:

english

File:

PDF, 585 KB

english, 2009

19

SuperLigands – a database of ligand structures derived from the Protein Data Bank

Elke Michalsky, Mathias Dunkel, Andrean Goede, Robert Preissner

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 662 KB

english, 2005

20

SUPERFICIAL – Surface mapping of proteins via structure-based peptide library design

Andrean Goede, Ines S Jaeger, Robert Preissner

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 878 KB

english, 2005

21

Columba: an integrated database of proteins, structures, and annotations

Silke Trißl, Kristian Rother, Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, Ulf Leser

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 755 KB

english, 2005

22

SuperMimic – Fitting peptide mimetics into protein structures

Andrean Goede, Elke Michalsky, Ulrike Schmidt, Robert Preissner

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 270 KB

english, 2006

23

Representation of target-bound drugs by computed conformers: implications for conformational libraries

Stefan Günther, Christian Senger, Elke Michalsky, Andrean Goede, Robert Preissner

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 907 KB

english, 2006

24

Novel curcumin- and emodin-related compounds identified byin silico2D/3D conformer screening induce apoptosis in tumor cells

Melanie Füllbeck, Xiaohua Huang, Renate Dumdey, Cornelius Frommel, Wolfgang Dubiel, Robert Preissner

Journal:

Year:

2005

Language:

english

File:

PDF, 582 KB

english, 2005

25

Sequence information within proteasomal prosequences mediates efficient integration of β-subunits into the 20 s proteasome complex

Marion Schmidt, Daniela Zantopf, Regine Kraft, Susanne Kostka, Robert Preissner, Peter-M Kloetzel

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 391 KB

english, 1999

26

Inhibiting the inhibitors: Retro-inverso Smac peptides

Julia Hossbach, Elke Michalsky, Peter Henklein, Marten Jaeger, Peter T. Daniel, Robert Preissner

Journal:

Year:

2009

Language:

english

File:

PDF, 423 KB

english, 2009

27

Inverse sequence similarity of proteins does not imply structural similarity

Stephan Lorenzen, Christoph Gille, Robert Preissner, Cornelius Frömmel

Journal:

Year:

2003

Language:

english

File:

PDF, 309 KB

english, 2003

28

Structural features of transmembrane helices

Peter Werner Hildebrand, Robert Preissner, Cornelius Frömmel

Journal:

Year:

2004

Language:

english

File:

PDF, 348 KB

english, 2004

29

The RTP Site Shared by the HIV-1 Tat Protein and the 11 S Regulator Subunit α is Crucial for their Effects on Proteasome Function Including Antigen Processing

Xiaohua Huang, Ulrike Seifert, Ulrike Salzmann, Peter Henklein, Robert Preissner, Wolfgang Henke, Alice J. Sijts, Peter-Michael Kloetzel, Wolfgang Dubiel

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 1.49 MB

english, 2002

30

Mapping discontinuous protein-binding sites via structure-based peptide libraries: combining in silico and in vitro approaches

Jaeger, Ines S., Kretzschmar, Ines, Körner, Jana, Weiser, Armin A., Mahrenholz, Carsten C., Potty, Ajish, Kourentzi, Katerina, Willson, Richard C., Volkmer, Rudolf, Preissner, Robert

Journal:

Journal of Molecular Recognition

Year:

2013

Language:

english

File:

PDF, 1.23 MB

english, 2013

31

Superhaptens and their potential role in contact dermatitis

Stefan Günther, Armin A. Weiser, Jessica Ahmed, Robert Preissner

Journal:

Drug Discovery Today: Therapeutic Strategies

Year:

2007

Language:

english

File:

PDF, 1.94 MB

english, 2007

32

Molecular Packing and Packing Defects in Helical Membrane Proteins

Hildebrand, Peter Werner, Rother, Kristian, Goede, Andrean, Preissner, Robert, Frömmel, Cornelius

Journal:

Biophysical Journal

Year:

2005

Language:

english

File:

PDF, 291 KB

english, 2005

33

Hydrogen-Bonding and Packing Features of Membrane Proteins: Functional Implications

Hildebrand, Peter Werner, Günther, Stefan, Goede, Andrean, Forrest, Lucy, Frömmel, Cornelius, Preissner, Robert

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 335 KB

english, 2008

34

Corrigendum to “Residues of a proposed gate region in type I ATP-binding cassette import systems are crucial for function as revealed by mutational analysis” [Biochim. Biophys. Acta 1828 (2013) 2164–2172]

Weidlich, Daniela, Wiesemann, Nicole, Heuveling, Johanna, Wardelmann, Kristina, Landmesser, Heidi, Sani, Katayoun Behnam, Worth, Catherine L., Preissner, Robert, Schneider, Erwin

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2014

Language:

english

File:

PDF, 118 KB

english, 2014

35

Residues of a proposed gate region in type I ATP-binding cassette import systems are crucial for function as revealed by mutational analysis

Weidlich, Daniela, Wiesemann, Nicole, Heuveling, Johanna, Wardelmann, Kristina, Landmesser, Heidi, Sani, Katayoun Behnam, Worth, Catherine L., Preissner, Robert, Schneider, Erwin

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2013

Language:

english

File:

PDF, 1.30 MB

english, 2013

36

GenderMedDB: an interactive database of sex and gender-specific medical literature

Oertelt-Prigione, Sabine, Gohlke, Björn-Oliver, Dunkel, Mathias, Preissner, Robert, Regitz-Zagrosek, Vera

Journal:

Biology of Sex Differences

Year:

2014

Language:

english

File:

PDF, 385 KB

english, 2014

37

Theoretical Modeling Techniques and Their Impact on Tumor Immunology

Woelke, Anna Lena, Murgueitio, Manuela S., Preissner, Robert

Journal:

Clinical & Developmental Immunology

Year:

2010

Language:

english

File:

PDF, 418 KB

english, 2010

38

DNA Vaccination: Using the Patient's Immune System to Overcome Cancer

Eschenburg, Georg, Stermann, Alexander, Preissner, Robert, Meyer, Hellmuth-Alexander, Lode, Holger N.

Journal:

Clinical & Developmental Immunology

Year:

2010

Language:

english

File:

PDF, 170 KB

english, 2010

39

Endogenous Bak inhibitors Mcl-1 and Bcl-xL: differential impact on TRAIL resistance in Bax-deficient carcinoma

Bernhard Gillissen, Jana Wendt, Antje Richter, Anja Richter, Annika Müer, Tim Overkamp, Nina Gebhardt, Robert Preissner, Claus Belka, Bernd Dörken and Peter T. Daniel

Journal:

The Journal of Cell Biology

Year:

2010

Language:

english

File:

PDF, 2.52 MB

english, 2010

40

Inhibition of DNA–Topoisomerase I by Acylated Triterpene Saponins fromPittosporum angustifoliumLodd.

Bäcker, Christian, Drwal, Malgorzata N., Preissner, Robert, Lindequist, Ulrike

Journal:

Natural Products and Bioprospecting

Year:

2016

Language:

english

File:

PDF, 1.69 MB

english, 2016

41

CancerResource—updated database of cancer-relevant proteins, mutations and interacting drugs

Gohlke, Bjoern-Oliver, Nickel, Janette, Otto, Raik, Dunkel, Mathias, Preissner, Robert

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 2.20 MB

english, 2016

42

2D and 3D similarity landscape analysis identifies PARP as a novel off-target for the drug Vatalanib

Gohlke, Bjoern-Oliver, Overkamp, Tim, Richter, Anja, Richter, Antje, Daniel, Peter T., Gillissen, Bernd, Preissner, Robert

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 2.00 MB

english, 2015

43

WITHDRAWN—a resource for withdrawn and discontinued drugs

Siramshetty, Vishal B., Nickel, Janette, Omieczynski, Christian, Gohlke, Bjoern-Oliver, Drwal, Malgorzata N., Preissner, Robert

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 2.55 MB

english, 2016

44

DBEndo: a web-based endodontic case management tool

Preissner, Saskia, Kostka, Eckehard, Mokross, Mareike, Kersten, Nina V., Blunck, Uwe, Preissner, Robert

Journal:

BMC Research Notes

Year:

2015

Language:

english

File:

PDF, 1.15 MB

english, 2015

45

SL2: an interactive webtool for modeling of missing segments in proteins

Ismer, Jochen, Rose, Alexander S., Tiemann, Johanna K. S., Goede, Andrean, Preissner, Robert, Hildebrand, Peter W.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 1.22 MB

english, 2016

46

Adjuvant antifungal therapy using tissue tolerable plasma on oral mucosa and removable dentures in oral candidiasis patients: a randomised double-blinded split-mouth pilot study

Preissner, Saskia, Kastner, Isabell, Schütte, Eyke, Hartwig, Stefan, Schmidt-Westhausen, Andrea Maria, Paris, Sebastian, Preissner, Robert, Hertel, Moritz

Journal:

Year:

2016

Language:

english

File:

PDF, 374 KB

english, 2016

47

Identification of signature volatiles to discriminate Candida albicans, glabrata, krusei and tropicalis using gas chromatography and mass spectrometry

Hertel, Moritz, Hartwig, Stefan, Schütte, Eyke, Gillissen, Bernhard, Preissner, Robert, Schmidt-Westhausen, Andrea Maria, Paris, Sebastian, Kastner, Isabell, Preissner, Saskia

Journal:

Year:

2016

Language:

english

File:

PDF, 147 KB

english, 2016

48

[IMPERIAL COLLEGE PRESS Proceedings of the 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) - Boston University, Boston, USA (27 – 29 July 2009)] Genome Informatics 2009 - STRUCTURAL FEATURES AND EVOLUTION OF PROTEIN-PROTEIN INTERACTIONS

VON EICHBORN, JOACHIM, GÜNTHER, STEFAN, PREISSNER, ROBERT

Language:

english

File:

PDF, 1.65 MB

english

49

Anti-diabetic effect of the ethyl acetate fraction of Clerodendrum volubile: protocatechuic acid suppresses phagocytic oxidative burst and modulates inflammatory cytokines

Erukainure, Ochuko L., Hafizur, Rahman M., Choudhary, M. Iqbal, Adhikari, Achyut, Mesaik, Ahmed M., Atolani, Olubunmi, Banerjee, Priyanka, Preissner, Robert, Muhammad, Aliyu, Islam, Md. Shahidul

Journal:

Biomedicine & Pharmacotherapy

Year:

2017

Language:

english

File:

PDF, 1.59 MB

english, 2017

50

Computational methods for prediction of in vitro effects of new chemical structures

Banerjee, Priyanka, Siramshetty, Vishal B., Drwal, Malgorzata N., Preissner, Robert

Journal:

Journal of Cheminformatics

Year:

2016

Language:

english

File:

PDF, 1.33 MB

english, 2016