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51

Genetic analysis of a morphologically heterogeneous ovarian endometrioid carcinoma

Geyer, Felipe C, Pareja, Fresia, Burke, Kathleen A, Schultheis, Anne M, Hussein, Yaser R, Ye, Jiqing, De Filippo, Maria R, Marchio, Caterina, Macedo, Gabriel S, Piscuoglio, Salvatore, Lim, Raymond S,

Journal:

Year:

2017

Language:

english

File:

PDF, 906 KB

english, 2017

52

High mobility group A1 enhances tumorigenicity of human cholangiocarcinoma and confers resistance to therapy

Quintavalle, Cristina, Burmeister, Katharina, Piscuoglio, Salvatore, Quagliata, Luca, Karamitopoulou, Eva, Sepe, Romina, Fusco, Alfredo, Terracciano, Luigi M., Andersen, Jesper B., Pallante, Pierloren

Journal:

Molecular Carcinogenesis

Year:

2017

Language:

english

File:

PDF, 1.10 MB

english, 2017

53

Molecular classification of hepatocellular carcinoma: The view from metabolic zonation

Ng, Charlotte K. Y., Piscuoglio, Salvatore, Terracciano, Luigi M

Journal:

Year:

2017

Language:

english

File:

PDF, 713 KB

english, 2017

54

Contralateral Breast Cancers: Independent Cancers or Metastases?

Begg, Colin B, Ostrovnaya, Irina, Geyer, Felipe C, Papanastasiou, Anastasios D, Ng, Charlotte KY, Sakr, Rita, Bernstein, Jonine L, Burke, Kathleen A, King, Tari A, Piscuoglio, Salvatore, Mauguen, Audr

Journal:

International Journal of Cancer

Year:

2017

Language:

english

File:

PDF, 1.04 MB

english, 2017

55

Phyllodes tumors with and without fibroadenoma-like areas display distinct genomic features and may evolve through distinct pathways

Pareja, Fresia, Geyer, Felipe C., Kumar, Rahul, Selenica, Pier, Piscuoglio, Salvatore, Ng, Charlotte K. Y., Burke, Kathleen A., Edelweiss, Marcia, Murray, Melissa P., Brogi, Edi, Weigelt, Britta, Reis

Journal:

npj Breast Cancer

Year:

2017

Language:

english

File:

PDF, 1.54 MB

english, 2017

56

Genomic and transcriptomic heterogeneity in metaplastic carcinomas of the breast

Piscuoglio, Salvatore, Ng, Charlotte K. Y., Geyer, Felipe C., Burke, Kathleen A., Cowell, Catherine F., Martelotto, Luciano G., Natrajan, Rachael, Popova, Tatiana, Maher, Christopher A., Lim, Raymond

Journal:

npj Breast Cancer

Year:

2017

Language:

english

File:

PDF, 2.69 MB

english, 2017

57

ESR1 and endocrine therapy resistance: more than just mutations

Piscuoglio, S, Ng, C K Y, Weigelt, B, Chandarlapaty, S, Reis-Filho, J S

Journal:

Annals of Oncology

Year:

2018

Language:

english

File:

PDF, 290 KB

english, 2018

58

Mutation profiling of key cancer genes in primary breast cancers and their distant metastases

Schrijver, Willemijne AME, Selenica, Pier, Lee, Ju Youn, Ng, Charlotte K. Y., Burke, Kathleen, Piscuoglio, Salvatore, Berman, Samuel H, Reis-Filho, Jorge S., Weigelt, Britta, Van Diest, Paul J, Moelan

Journal:

Cancer Research

Year:

2018

Language:

english

File:

PDF, 5.78 MB

english, 2018

59

NGS-pipe: a flexible, easily extendable and highly configurable framework for NGS analysis

Singer, Jochen, Ruscheweyh, Hans-Joachim, Hofmann, Ariane L, Thurnherr, Thomas, Singer, Franziska, Toussaint, Nora C, Ng, Charlotte K Y, Piscuoglio, Salvatore, Beisel, Christian, Christofori, Gerhard,

Journal:

Year:

2018

Language:

english

File:

PDF, 128 KB

english, 2018

60

Capturing intra-tumor genetic heterogeneity by de novo mutation profiling of circulating cell-free tumor DNA: a proof-of-principle

Mattos-Arruda, L De, Weigelt, B, Cortes, J, Won, H H, Ng, C K Y, Nuciforo, P, Bidard, F-C, Aura, C, Saura, C, Peg, V, Piscuoglio, S, Oliveira, M, Smolders, Y, Patel, P, Norton, L, Tabernero, J, Berger

Journal:

Annals of Oncology

Year:

2018

Language:

english

File:

PDF, 41 KB

english, 2018

61

Recurrent hotspot mutations in HRAS Q61 and PI3K-AKT pathway genes as drivers of breast adenomyoepitheliomas

Geyer, Felipe C., Li, Anqi, Papanastasiou, Anastasios D., Smith, Alison, Selenica, Pier, Burke, Kathleen A., Edelweiss, Marcia, Wen, Huei-Chi, Piscuoglio, Salvatore, Schultheis, Anne M., Martelotto, L

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 7.41 MB

english, 2018

62

TIA-1 Cytotoxic Granule-Associated RNA Binding Protein Improves the Prognostic Performance of CD8 in Mismatch Repair-Proficient Colorectal Cancer

Zlobec, Inti, Karamitopoulou, Eva, Terracciano, Luigi, Piscuoglio, Salvatore, Iezzi, Giandomenica, Muraro, Manuele Giuseppe, Spagnoli, Giulio, Baker, Kristi, Tzankov, Alexandar, Lugli, Alessandro, Nav

Journal:

Year:

2010

Language:

english

File:

PDF, 793 KB

english, 2010

63

Cost-effective target sequencing panel for hepatocellular carcinoma mutational screening

Paradiso, V., Garofoli, A., Tosti, N., Perrina, V., Lanzafame, M., Quagliata, L., Matter, M., Wieland, S., Heim, M., Piscuoglio, S., Ng, C., Terracciano, L.M.

Journal:

Journal of Hepatology

Year:

2018

Language:

english

File:

PDF, 131 KB

english, 2018

64

The Role of Long Non-Coding RNAs in Hepatocarcinogenesis

Lanzafame, Manuela, Bianco, Gaia, Terracciano, Luigi, Ng, Charlotte, Piscuoglio, Salvatore

Journal:

International Journal of Molecular Sciences

Year:

2018

Language:

english

File:

PDF, 1.45 MB

english, 2018

65

Genomic Analysis Revealed New Oncogenic Signatures in TP53-Mutant Hepatocellular Carcinoma

Kancherla, Venkatesh, Abdullazade, Samir, Matter, Matthias S., Lanzafame, Manuela, Quagliata, Luca, Roma, Guglielmo, Hoshida, Yujin, Terracciano, Luigi M., Ng, Charlotte K. Y., Piscuoglio, Salvatore

Journal:

Frontiers in Genetics

Year:

2018

Language:

english

File:

PDF, 3.89 MB

english, 2018

66

Circulating Cell-Free DNA in Hepatocellular Carcinoma: Current Insights and Outlook

Ng, Charlotte K. Y., Di Costanzo, Giovan Giuseppe, Terracciano, Luigi M., Piscuoglio, Salvatore

Journal:

Frontiers in Medicine

Year:

2018

Language:

english

File:

PDF, 541 KB

english, 2018

67

Organoid Models of Human Liver Cancers Derived from Tumor Needle Biopsies

Nuciforo, Sandro, Fofana, Isabel, Matter, Matthias S., Blumer, Tanja, Calabrese, Diego, Boldanova, Tujana, Piscuoglio, Salvatore, Wieland, Stefan, Ringnalda, Femke, Schwank, Gerald, Terracciano, Luigi

Journal:

Year:

2018

Language:

english

File:

PDF, 6.57 MB

english, 2018

68

Diagnostic targeted sequencing panel for hepatocellular carcinoma genomic screening

Paradiso, Viola, Garofoli, Andrea, Tosti, Nadia, Lanzafame, Manuela, Perrina, Valeria, Quagliata, Luca, Matter, Matthias S., Wieland, Stefan, Heim, Markus H., Piscuoglio, Salvatore, Ng, Charlotte K.Y.

Journal:

The Journal of Molecular Diagnostics

Year:

2018

Language:

english

File:

PDF, 2.36 MB

english, 2018

69

Lobular carcinomas in situ display intra-lesion genetic heterogeneity and clonal evolution in the progression to invasive lobular carcinoma

Lee, Ju Youn, Schizas, Michail, Geyer, Felipe C, Selenica, Pier, Piscuoglio, Salvatore, Sakr, Rita A, Ng, Charlotte K. Y., Scarpa-Carniello, Jose Victor, Towers, Russell, Giri, Dilip D., de Andrade, V

Journal:

Clinical Cancer Research

Year:

2018

Language:

english

File:

PDF, 3.48 MB

english, 2018

70

Pregnancy at early age is associated with a reduction of progesterone-responsive cells and epithelial Wnt signaling in human breast tissue

Muenst, Simone, Mechera, Robert, Däster, Silvio, Piscuoglio, Salvatore, Ng, Charlotte K.Y., Meier-Abt, Fabienne, Weber, Walter P., Soysal, Savas D.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.44 MB

english, 2017

71

Reliability of Whole-Exome Sequencing for Assessing Intratumor Genetic Heterogeneity

Shi, Weiwei, Ng, Charlotte K.Y., Lim, Raymond S., Jiang, Tingting, Kumar, Sushant, Li, Xiaotong, Wali, Vikram B., Piscuoglio, Salvatore, Gerstein, Mark B., Chagpar, Anees B., Weigelt, Britta, Pusztai,

Journal:

Year:

2018

Language:

english

File:

PDF, 2.56 MB

english, 2018

72

Fibroepithelial Breast Lesion: When Sequencing Can Help to Make a Clinical Decision. A Case Report

Montagna, Giacomo, Ng, Charlotte K.Y., Vlajnic, Tatjana, Paradiso, Viola, Dellas, Sophie, Reina, Hubertina, Kind, André, Weber, Walter P., Piscuoglio, Salvatore, Kurzeder, Christian

Journal:

Clinical Breast Cancer

Year:

2018

Language:

english

File:

PDF, 1.05 MB

english, 2018

73

Genetic heterogeneity and actionable mutations in HER2-positive primary breast cancers and their brain metastases

Ng, Charlotte K. Y., Piscuoglio, Salvatore, Gonzalez-Cao, Maria, Lim, Raymond S., De Filippo, Maria R., Fusco, Nicola, Schultheis, Anne M., Ortiz, Carolina, Viteri, Santiago, Arias, Alexandra, Macedo,

Journal:

Year:

2018

Language:

english

File:

PDF, 4.61 MB

english, 2018

74

Expression of RET is associated with Oestrogen receptor expression but lacks prognostic significance in breast cancer

Mechera, Robert, Soysal, Savas D., Piscuoglio, Salvatore, Ng, Charlotte K. Y., Zeindler, Jasmin, Mujagic, Edin, Däster, Silvio, Glauser, Philippe, Hoffmann, Henry, Kilic, Ergin, Droeser, Raoul A., Web

Journal:

Year:

2019

File:

PDF, 1016 KB

2019

75

Expression of RET is associated with Oestrogen receptor expression but lacks prognostic significance in breast cancer

Mechera, Robert, Soysal, Savas D., Piscuoglio, Salvatore, Ng, Charlotte K. Y., Zeindler, Jasmin, Mujagic, Edin, Däster, Silvio, Glauser, Philippe, Hoffmann, Henry, Kilic, Ergin, Droeser, Raoul A., Web

Journal:

Year:

2019

Language:

english

File:

PDF, 1016 KB

english, 2019

76

Infiltration by myeloperoxidase-positive neutrophils is an independent prognostic factor in breast cancer

Zeindler, Jasmin, Angehrn, Fiorenzo, Droeser, Raoul, Däster, Silvio, Piscuoglio, Salvatore, Ng, Charlotte K. Y., Kilic, Ergin, Mechera, Robert, Meili, Samuel, Isaak, Andrej, Weber, Walter P., Muenst,

Journal:

Breast Cancer Research and Treatment

Year:

2019

Language:

english

File:

PDF, 1.06 MB

english, 2019

77

PipeIT: Singularity Container for Molecular Diagnostic Somatic Variant Calling on Ion Torrent NGS Platform

Garofoli, Andrea, Paradiso, Viola, Montazeri, Hesam, Jermann, Philip M., Roma, Guglielmo, Tornillo, Luigi, Terracciano, Luigi M., Piscuoglio, Salvatore, Ng, Charlotte K.Y.

Journal:

The Journal of Molecular Diagnostics

Year:

2019

Language:

english

File:

PDF, 10.21 MB

english, 2019

78

Author Correction: Genomic characterization of metastatic breast cancers

Bertucci, François, Ng, Charlotte K. Y., Patsouris, Anne, Droin, Nathalie, Piscuoglio, Salvatore, Carbuccia, Nadine, Soria, Jean Charles, Dien, Alicia Tran, Adnani, Yahia, Kamal, Maud, Garnier, Séveri

Journal:

Year:

2019

Language:

english

File:

PDF, 505 KB

english, 2019

79

PipeIT: Singularity Container for Molecular Diagnostic Somatic Variant Calling on Ion Torrent NGS Platform

Garofoli, Andrea, Paradiso, Viola, Montazeri, Hesam, Jermann, Philip M., Roma, Guglielmo, Tornillo, Luigi, Terracciano, Luigi M., Piscuoglio, Salvatore, Ng, Charlotte K.Y.

Journal:

The Journal of Molecular Diagnostics

Year:

2019

File:

PDF, 10.21 MB

2019

80

Homologous recombination DNA repair defects in PALB2-associated breast cancers

Li, Anqi, Geyer, Felipe C., Blecua, Pedro, Lee, Ju Youn, Selenica, Pier, Brown, David N., Pareja, Fresia, Lee, Simon S. K., Kumar, Rahul, Rivera, Barbara, Bi, Rui, Piscuoglio, Salvatore, Wen, Hannah Y

Journal:

npj Breast Cancer

Year:

2019

Language:

english

File:

PDF, 2.05 MB

english, 2019

81

Genetic Alterations in Benign Breast Biopsies of Subsequent Breast Cancer Patients

Soysal, Savas D., Ng, Charlotte K. Y., Costa, Luigi, Weber, Walter P., Paradiso, Viola, Piscuoglio, Salvatore, Muenst, Simone

Journal:

Frontiers in Medicine

Year:

2019

Language:

english

File:

PDF, 276 KB

english, 2019

82

Establishment of an androgen-sensitive patient derived xenograft model of prostate cancer

Karkampouna, S., Grosjean, J., Klima, I., Genitsch, V., Sboner, A., K. Y. Ng, C., De Filippo, M.R., Piscuoglio, S., Spahn, M., Rubin, M.A., Thalmann, G.N., Kruithof-De Julio, M.

Journal:

European Urology Supplements

Year:

2019

File:

PDF, 88 KB

2019

83

292 Patients with MAUIE syndrome are carriers of heterozygous IWC-associated KRT10 variants

Burger, B., Ghosh, A., Ng, C.K., Piscuoglio, S., Spoerri, I., von Arb, S., Itin, P.H., Greer, K., Elbaum, D.

Journal:

The Journal of Investigative Dermatology

Year:

2019

Language:

english

File:

PDF, 201 KB

english, 2019

84

OTHR-17. PHYLOGENETIC RESOLUTION OF TISSUE-SPECIFIC METASTOGENIC CLONES IN RENAL CELL CARCINOMA

Moss, Nelson, Berman, Samuel, Piscuoglio, Salvatore, Ng, Charlotte, Selenica, Pier, Kumar, Rahul, Filho, Jorge Reis, Brennan, Cameron

Journal:

Neuro-Oncology Advances

Year:

2019

Language:

english

File:

PDF, 73 KB

english, 2019

85

Nectin-4 expression is a prognostic biomarker and associated with worse survival in triple-negative breast cancer

Zeindler, J., Münst, S., Piscuoglio, S., Ng, K.Y.C., Ritter, M., Mechera, R., Soysal, S.D., Weber, W.P.

Journal:

Year:

2019

Language:

english

File:

PDF, 50 KB

english, 2019

86

Publisher Correction: Homologous recombination DNA repair defects in PALB2-associated breast cancers

Li, Anqi, Geyer, Felipe C., Blecua, Pedro, Lee, Ju Youn, Selenica, Pier, Brown, David N., Pareja, Fresia, Lee, Simon S. K., Kumar, Rahul, Rivera, Barbara, Bi, Rui, Piscuoglio, Salvatore, Wen, Hannah Y

Journal:

npj Breast Cancer

Year:

2019

Language:

english

File:

PDF, 547 KB

english, 2019

87

Publisher Correction: Homologous recombination DNA repair defects in PALB2-associated breast cancers

Li, Anqi, Geyer, Felipe C., Blecua, Pedro, Lee, Ju Youn, Selenica, Pier, Brown, David N., Pareja, Fresia, Lee, Simon S. K., Kumar, Rahul, Rivera, Barbara, Bi, Rui, Piscuoglio, Salvatore, Wen, Hannah Y

Journal:

npj Breast Cancer

Year:

2019

File:

PDF, 547 KB

2019

88

Preoperative plasma fatty acid metabolites inform risk of prostate cancer progression and may be used for personalized patient stratification

Zoni, Eugenio, Minoli, Martina, Bovet, Cédric, Wehrhan, Anne, Piscuoglio, Salvatore, Ng, Charlotte K. Y., Gray, Peter C., Spahn, Martin, Thalmann, George N., Kruithof-de Julio, Marianna

Journal:

Year:

2019

File:

PDF, 5.43 MB

2019

89

Hormone receptor and HER2 assessment in breast carcinoma metastatic to bone: A comparison between FNA cell blocks and decalcified core needle biopsies

Zeng, Jennifer, Piscuoglio, Salvatore, Aggarwal, Gitika, Magda, Joanna, Friedlander, Maria A., Murray, Melissa, Akram, Muzaffar, Reis‐Filho, Jorge S., Weigelt, Britta, Edelweiss, Marcia

Journal:

Cancer Cytopathology

Year:

2019

File:

PDF, 808 KB

2019

90

Discovery of heterozygous KRT10 alterations in MAUIE patients underlines the importance of regular skin cancer screening in ichthyosis with confettiâpatients

Burger, B., Ghosh, A., Ng, C.K.Y, Piscuoglio, S., Spoerri, I., Itin, P.H., Greer, K., Elbaum, D.

Journal:

British Journal of Dermatology

Year:

2020

File:

PDF, 2.58 MB

2020

91

A Pygopus 2-histone interaction is critical for cancer cell de-differentiation and progression in malignant breast cancer

Saxena, Meera, Kalathur, Ravi K.R., Rubinstein, Natalia, Vettiger, Andrea, Sugiyama, Nami, Neutzner, Melanie, Coto-Llerena, Mairene, Kancherla, Venkatesh, Ercan, Caner, Piscuoglio, Salvatore, Fischer,

Journal:

Cancer Research

Year:

2020

File:

PDF, 4.24 MB

2020

92

Reliability of liquid biopsy analysis: an inter-laboratory comparison of circulating tumor DNA extraction and sequencing with different platforms

Koessler, Thibaud, Paradiso, Viola, Piscuoglio, Salvatore, Nienhold, Ronny, Ho, Liza, Christinat, Yann, Terracciano, Luigi M., Cathomas, Gieri, Wicki, Andreas, McKee, Thomas A., Nouspikel, Thierry

Journal:

Laboratory Investigation

Year:

2020

File:

PDF, 1.17 MB

2020

93

Identification of Somatic Mutations in Thirty-year-old Serum Cell-free DNA From Patients With Breast Cancer: A Feasibility Study

Ritter, Mathilde, Paradiso, Viola, Widmer, Patrik, Garofoli, Andrea, Quagliata, Luca, Eppenberger-Castori, Serenella, Soysal, Savas D., Muenst, Simone, Ng, Charlotte K.Y., Piscuoglio, Salvatore, Weber

Journal:

Clinical Breast Cancer

Year:

2020

File:

PDF, 709 KB

2020

94

The genetic landscape of metaplastic breast cancers and uterine carcinosarcomas

Moukarzel, Lea, Ferrando, Lorenzo, Da Cruz Paula, Arnaud, Brown, David N, Geyer, Felipe C, Pareja, Fresia, Piscuoglio, Salvatore, Papanastasiou, Anastasios D., Fusco, Nicola, MarchiÃ², Caterina, Abuâ

Journal:

Molecular Oncology

Year:

2020

File:

PDF, 4.47 MB

2020

95

Uterine carcinosarcomas and metaplastic breast carcinomas: Genetically related cancers?

Moukarzel, L.A., Ferrando, L., Paula, A.D.C., Brown, D., Geyer, F.C., Pareja, F., Piscuoglio, S., Papanastasiou, A.D., Fusco, N., Marchio, C., Abu-Rustum, N.R., Murali, R., Brogi, E., Wen, H., Norton,

Journal:

Gynecologic Oncology

Year:

2020

File:

PDF, 1.78 MB

2020

96

Deciphering the clonal relationship between glandular and squamous components in adenosquamous carcinoma of the lung using whole exome sequencing

Krause, Arthur, Roma, Luca, Lorber, Thomas, Habicht, James, Lardinois, Didier, De Filippo, Maria Rosaria, Prince, Spasenija Savic, Piscuoglio, Salvatore, Ng, CharlotteKY, Bubendorf, Lukas

Journal:

Year:

2020

File:

PDF, 2.30 MB

2020