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51

A novel diffuse gastric cancer susceptibility variant in E-cadherin (CDH1) intron 2: A case control study in an Italian population

Soroush Nasri, Helen More, Francesco Graziano, Annamaria Ruzzo, Emily Wilson, Anita Dunbier, Cushla McKinney, Tony Merriman, Parry Guilford, Mauro Magnani, Bostjan Humar

Journal:

Year:

2008

Language:

english

File:

PDF, 252 KB

english, 2008

52

Integration of 198 ChIP-seq Datasets Reveals Human cis -Regulatory Regions

Bolouri, Hamid, Ruzzo, Walter L.

Journal:

Journal of Computational Biology

Year:

2012

Language:

english

File:

PDF, 332 KB

english, 2012

53

Genome-wide MyoD Binding in Skeletal Muscle Cells: A Potential for Broad Cellular Reprogramming

Yi Cao, Zizhen Yao, Deepayan Sarkar, Michael Lawrence, Gilson J. Sanchez, Maura H. Parker, Kyle L. MacQuarrie, Jerry Davison, Martin T. Morgan, Walter L. Ruzzo, Robert C. Gentleman, Stephen J. Tapscot

Journal:

Developmental Cell

Year:

2010

Language:

english

File:

PDF, 1.17 MB

english, 2010

54

DUX4 Activates Germline Genes, Retroelements, and Immune Mediators: Implications for Facioscapulohumeral Dystrophy

Linda N. Geng, Zizhen Yao, Lauren Snider, Abraham P. Fong, Jennifer N. Cech, Janet M. Young, Silvere M. van der Maarel, Walter L. Ruzzo, Robert C. Gentleman, Rabi Tawil, Stephen J. Tapscott

Journal:

Developmental Cell

Year:

2012

Language:

english

File:

PDF, 1.51 MB

english, 2012

55

Genetic and Epigenetic Determinants of Neurogenesis and Myogenesis

Abraham P. Fong, Zizhen Yao, Jun Wen Zhong, Yi Cao, Walter L. Ruzzo, Robert C. Gentleman, Stephen J. Tapscott

Journal:

Developmental Cell

Year:

2012

Language:

english

File:

PDF, 1.73 MB

english, 2012

56

NOD2/CARD15 polymorphisms impair innate immunity and increase susceptibility to gastric cancer in an Italian population

Silvia Angeletti, Sara Galluzzo, Daniele Santini, Annamaria Ruzzo, Bruno Vincenzi, Elisabetta Ferraro, Chiara Spoto, Giulia Lorino, Nicoletta Graziano, Alice Calvieri, Mauro Magnani, Francesco Grazian

Journal:

Human Immunology

Year:

2009

Language:

english

File:

PDF, 242 KB

english, 2009

57

High resolution melting (HRM) analysis for the detection of ER22/23EK, BclI, and N363S polymorphisms of the glucocorticoid receptor gene

Paolo Maltese, Emanuele Canestrari, Linda Palma, Annamaria Ruzzo, Francesco Corini, Michele Menotta, Francesca Andreoni, Anna Latiano, Vito Annese, Mauro Magnani

Journal:

The Journal of Steroid Biochemistry and Molecular Biology

Year:

2009

Language:

english

File:

PDF, 1.35 MB

english, 2009

58

Two Applications of Inductive Counting for Complementation Problems

Borodin, Allan, Cook, Stephen A., Dymond, Patrick W., Ruzzo, Walter L., Tompa, Martin

Journal:

SIAM Journal on Computing

Year:

1989

Language:

english

File:

PDF, 2.40 MB

english, 1989

59

Erratum: Two Applications of Indctive Counting for Complementation Problems

Borodin, Allan, Cook, Stephen A., Dymond, Patrick W., Ruzzo, Walter L., Tompa, Martin

Journal:

SIAM Journal on Computing

Year:

1989

Language:

english

File:

PDF, 70 KB

english, 1989

60

A Sublinear Space, Polynomial Time Algorithm for Directed s-t Connectivity

Barnes, Greg, Buss, Jonathan F., Ruzzo, Walter L., Schieber, Baruch

Journal:

SIAM Journal on Computing

Year:

1998

Language:

english

File:

PDF, 278 KB

english, 1998

61

A Time-Space Tradeoff for Undirected Graph Traversal by Walking Automata

Beame, Paul, Borodin, Allan, Raghavan, Prabhakar, Ruzzo, Walter L., Tompa, Martin

Journal:

SIAM Journal on Computing

Year:

1998

Language:

english

File:

PDF, 423 KB

english, 1998

62

201 Analysis of G/A SNP change at position 2494 in the E-cadherin gene in Italian patients with sporadic, diffuse gastric cancer

A. Ruzzo, F. Graziano, A. Costagliola, E. Testa, F. Andreoni, F. Arduini, A. Antolini, I. Bearzi, A. De Gaetano, M. Magnari

Journal:

European Journal of Cancer Supplements

Year:

2003

Language:

english

File:

PDF, 166 KB

english, 2003

63

210 An analysis of CDH1 −160 C/A promoter polymorphism and the risk of diffuse gastric cancer in Italy

A. Ruzzo, C. Spino, F. Graziano, E. Testa, A. Costagliola, F. Arduini, D. Santini, F. Andreoni, M. Magnani

Journal:

European Journal of Cancer Supplements

Year:

2003

Language:

english

File:

PDF, 166 KB

english, 2003

64

Modifier genetics in neuropsychiatric disease: challenges and opportunities

Elizabeth K Ruzzo, Andrea L Pappas, David B Goldstein

Journal:

Year:

2012

Language:

english

File:

PDF, 80 KB

english, 2012

65

Exome Sequencing Followed by Large-Scale Genotyping Fails to Identify Single Rare Variants of Large Effect in Idiopathic Generalized Epilepsy

Erin L. Heinzen, Chantal Depondt, Gianpiero L. Cavalleri, Elizabeth K. Ruzzo, Nicole M. Walley, Anna C. Need, Dongliang Ge, Min He, Elizabeth T. Cirulli, Qian Zhao, Kenneth D. Cronin, Curtis E. Gumbs,

Journal:

The American Journal of Human Genetics

Year:

2012

Language:

english

File:

PDF, 454 KB

english, 2012

66

Mutation in TECPR2 Reveals a Role for Autophagy in Hereditary Spastic Paraparesis

Danit Oz-Levi, Bruria Ben-Zeev, Elizabeth K. Ruzzo, Yuki Hitomi, Amir Gelman, Kimberly Pelak, Yair Anikster, Haike Reznik-Wolf, Ifat Bar-Joseph, Tsviya Olender, Anna Alkelai, Meira Weiss, Edna Ben-Ash

Journal:

The American Journal of Human Genetics

Year:

2012

Language:

english

File:

PDF, 941 KB

english, 2012

67

Using ERDS to Infer Copy-Number Variants in High-Coverage Genomes

Mingfu Zhu, Anna C. Need, Yujun Han, Dongliang Ge, Jessica M. Maia, Qianqian Zhu, Erin L. Heinzen, Elizabeth T. Cirulli, Kimberly Pelak, Min He, Elizabeth K. Ruzzo, Curtis Gumbs, Abanish Singh, Sheng

Journal:

The American Journal of Human Genetics

Year:

2012

Language:

english

File:

PDF, 1.81 MB

english, 2012

68

Transcripts within silicopredicted RNA structure are enriched everywhere in the mouse brain

Seemann, Stefan E, Sunkin, Susan M, Hawrylycz, Michael J, Ruzzo, Walter L, Gorodkin, Jan

Journal:

Year:

2012

Language:

english

File:

PDF, 710 KB

english, 2012

69

Retrospective exploratory analysis ofVEGFpolymorphisms in the prediction of benefit from first-line FOLFIRI plus bevacizumab in metastatic colorectal cancer

Fotios Loupakis, Annamaria Ruzzo, Lisa Salvatore, Chiara Cremolini, Gianluca Masi, Paolo Frumento, Marta Schirripa, Vincenzo Catalano, Nadia Galluccio, Emanuele Canestrari, Bruno Vincenzi, Daniele San

Journal:

Year:

2011

Language:

english

File:

PDF, 624 KB

english, 2011

70

Pharmacogenetic profiling in patients with advanced colorectal cancer treated with first-line FOLFIRI chemotherapy

Ruzzo, A, Graziano, F, Loupakis, F, Santini, D, Catalano, V, Bisonni, R, Ficarelli, R, Fontana, A, Andreoni, F, Falcone, A, Canestrari, E, Tonini, G, Mari, D, Lippe, P, Pizzagalli, F, Schiavon, G, Ale

Journal:

The Pharmacogenomics Journal

Year:

2008

Language:

english

File:

PDF, 123 KB

english, 2008

71

Genetic modulation of the Let-7 microRNA binding to KRAS 3′-untranslated region and survival of metastatic colorectal cancer patients treated with salvage cetuximab–irinotecan

Graziano, F, Canestrari, E, Loupakis, F, Ruzzo, A, Galluccio, N, Santini, D, Rocchi, M, Vincenzi, B, Salvatore, L, Cremolini, C, Spoto, C, Catalano, V, D'Emidio, S, Giordani, P, Tonini, G, Falcone, A,

Journal:

The Pharmacogenomics Journal

Year:

2010

Language:

english

File:

PDF, 353 KB

english, 2010

72

Comparison of endogenous and overexpressed MyoD shows enhanced binding of physiologically bound sites

Zizhen Yao, Abraham P Fong, Yi Cao, Walter L Ruzzo, Robert C Gentleman…

Journal:

Skeletal Muscle

Year:

2013

Language:

english

File:

PDF, 693 KB

english, 2013

73

[IEEE 2012 Symposium on Application Accelerators in High Performance Computing (SAAHPC) - Argonne, IL, USA (2012.07.10-2012.07.11)] 2012 Symposium on Application Accelerators in High Performance Computing - A Model for Programming Data-Intensive Applications on FPGAs: A Genomics Case Study

Brossard, Elliott, Richmond, Dustin, Green, Joshua, Ebeling, Carl, Ruzzo, Larry, Olson, Corey, Hauck, Scott

Year:

2012

Language:

english

File:

PDF, 291 KB

english, 2012

74

[ACM Press the fifth symposium - Austin, Texas, United States (1975.11.19-1975.11.21)] Proceedings of the fifth symposium on Operating systems principles - SOSP '75 - On protection in operating systems

Harrison, Michael A., Ruzzo, Walter L., Ullman, Jeffrey D.

Year:

1975

Language:

english

File:

PDF, 950 KB

english, 1975

75

Discriminative motif analysis of high-throughput dataset

Yao, Z., MacQuarrie, K. L., Fong, A. P., Tapscott, S. J., Ruzzo, W. L., Gentleman, R. C.

Journal:

Year:

2014

Language:

english

File:

PDF, 4.24 MB

english, 2014

76

Pharmacogenetic Profiling for Cetuximab Plus Irinotecan Therapy in Patients With Refractory Advanced Colorectal Cancer

Graziano, F., Ruzzo, A., Loupakis, F., Canestrari, E., Santini, D., Catalano, V., Bisonni, R., Torresi, U., Floriani, I., Schiavon, G., Andreoni, F., Maltese, P., Rulli, E., Humar, B., Falcone, A., Gi

Journal:

Journal of Clinical Oncology

Year:

2008

Language:

english

File:

PDF, 127 KB

english, 2008

77

Non-recurrent SEPT9 duplications cause hereditary neuralgic amyotrophy

Collie, A. M. B., Landsverk, M. L., Ruzzo, E., Mefford, H. C., Buysse, K., Adkins, J. R., Knutzen, D. M., Barnett, K., Brown, R. H., Parry, G. J., Yum, S. W., Simpson, D. A., Olney, R. K., Chinnery, P

Journal:

Journal of Medical Genetics

Year:

2010

Language:

english

File:

PDF, 1.10 MB

english, 2010

78

[Methods in Molecular Biology] RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods Volume 1097 || An Introduction to RNA Databases

Gorodkin, Jan, Ruzzo, Walter L.

Year:

2014

Language:

english

File:

PDF, 333 KB

english, 2014

79

[Methods in Molecular Biology] RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods Volume 1097 ||

Gorodkin, Jan, Ruzzo, Walter L.

Year:

2014

Language:

english

File:

PDF, 12.39 MB

english, 2014

80

Deficiency of Asparagine Synthetase Causes Congenital Microcephaly and a Progressive Form of Encephalopathy

Ruzzo, Elizabeth K., Capo-Chichi, José-Mario, Ben-Zeev, Bruria, Chitayat, David, Mao, Hanqian, Pappas, Andrea L., Hitomi, Yuki, Lu, Yi-Fan, Yao, Xiaodi, Hamdan, Fadi F., Pelak, Kimberly, Reznik-Wolf,

Journal:

Year:

2013

Language:

english

File:

PDF, 1.92 MB

english, 2013

81

6113 BRAF V600E mutation and Amphiregulin (AR) immunohistochemical expression in the prediction of benefit from cetuximab plus irinotecan in KRAS wild-type metastatic colorectal cancer (mCRC) patients

Cremolini, C., Loupakis, F., Perrone, G., Ruzzo, A., Rulli, E., Bencardino, K., Vincenzi, B., Salvatore, L., Graziano, F., Falcone, A.

Journal:

European Journal of Cancer Supplements

Year:

2009

Language:

english

File:

PDF, 66 KB

english, 2009

82

Transcriptional Analyses of Barrett's Metaplasia and Normal Upper GI Mucosae

Barrett, Michael T., Yeung, Ka Yee, Ruzzo, Walter L., Hsu, Li, Blount, Patricia L., Sullivan, Robert, Zarbl, Helmut, Delrow, Jeffrey, Rabinovitch, Peter S., Reid, Brian J.

Journal:

Year:

2002

Language:

english

File:

PDF, 161 KB

english, 2002

83

6115 VEGF gene polymorphisms in the prediction of benefit from first-line FOLFIRI plus bevacizumab (BV) in metastatic colorectal cancer (mCRC) patients (pts)

Loupakis, F., Ruzzo, A., Salvatore, L., Canestrari, E., Cremolini, C., Santini, D., Bencardino, K., Manzoni, M., Falcone, A., Graziano, F.

Journal:

European Journal of Cancer Supplements

Year:

2009

Language:

english

File:

PDF, 48 KB

english, 2009

84

Bone morphogenetic protein 4: Potential regulator of shear stress-induced graft neointimal atrophy

Wang, Xi, Chang, Cindy M.C., Yao, Zizhen, Ruzzo, Walter L., Justice, Suzanne, Hudkins, Kelly L., Hsieh, Patrick C.H., Kenagy, Richard D., Mulvihill, Eileen R., Jeanette, Joseph P.

Journal:

Journal of Vascular Surgery

Year:

2006

Language:

english

File:

PDF, 420 KB

english, 2006

85

Anodes for Refuelable Magnesium-Air Batteries

Hamlen, R. P., Jerabek, E. C., Ruzzo, J. C., Siwek, E. G.

Journal:

Journal of The Electrochemical Society

Year:

1969

Language:

english

File:

PDF, 804 KB

english, 1969

86

Genetic modulation of the interleukin 6 (IL-6) system in patients with advanced gastric cancer: a background for an alternative target therapy

Ruzzo, Annamaria, Catalano, Vincenzo, Canestrari, Emanuele, Giacomini, Elisa, Santini, Daniele, Tonini, Giuseppe, Vincenzi, Bruno, Fiorentini, Giammaria, Magnani, Mauro, Graziano, Francesco

Journal:

Year:

2014

Language:

english

File:

PDF, 236 KB

english, 2014

87

Role of immunoglobulin G fragment C receptor polymorphism-mediated antibody-dependant cellular cytotoxicity in colorectal cancer treated with cetuximab therapy

Negri, F V, Musolino, A, Naldi, N, Bortesi, B, Missale, G, Laccabue, D, Zerbini, A, Camisa, R, Chernyschova, N, Bisagni, G, Loupakis, F, Ruzzo, A, Neri, T M, Ardizzoni, A

Journal:

The Pharmacogenomics Journal

Year:

2014

Language:

english

File:

PDF, 434 KB

english, 2014

88

Characterization of Human Uveal Melanoma Cells by Phosphorus 31 Nuclear Magnetic Resonance Spectroscopy

Kolodny, Nancy H., Albert, Daniel M., Epstein, James, Ruzzo, Maryanne, Sprengnether, Michele

Journal:

American Journal of Ophthalmology

Year:

1985

Language:

english

File:

PDF, 596 KB

english, 1985

89

Endogastric capsule for E-cadherin gene (CDH1) promoter hypermethylation assessment in DNA from gastric juice of diffuse gastric cancer patients

Muretto, P., Ruzzo, A., Pizzagalli, F., Graziano, F., Maltese, P., Zingaretti, C., Berselli, E., Donnarumma, N., Magnani, M.

Journal:

Annals of Oncology

Year:

2007

Language:

english

File:

PDF, 543 KB

english, 2007

90

The genotype of a new linked DNA marker, MP6d-9, is related to the clinical course of cystic fibrosis.

Gasparini, P, Novelli, G, Estivill, X, Olivieri, D, Savoia, A, Ruzzo, A, Nunes, V, Borgo, G, Antonelli, M, Williamson, R

Journal:

Journal of Medical Genetics

Year:

1990

Language:

english

File:

PDF, 636 KB

english, 1990

91

[IEEE 1993 IEEE Instrumentation and Measurement Technology Conference - Irvine, CA, USA (18-20 May 1993)] 1993 IEEE Instrumentation and Measurement Technology Conference - Fuzzy methods for multisensor data fusion

Ruzzo, F., Ramponi, G.

Year:

1993

Language:

english

File:

PDF, 543 KB

english, 1993

92

[IEEE Comput. Soc. Press [1992] Seventh Annual Structure in Complexity Theory Conference - Boston, MA, USA (22-25 June 1992)] [1992] Proceedings of the Seventh Annual Structure in Complexity Theory Conference - A sublinear space, polynomial time algorithm for directed s-t connectivity

Barnes, G., Buss, J.F., Ruzzo, W.L., Schieber, B.

Year:

1992

Language:

english

File:

PDF, 547 KB

english, 1992

93

PTEN Expression and KRAS Mutations on Primary Tumors and Metastases in the Prediction of Benefit From Cetuximab Plus Irinotecan for Patients With Metastatic Colorectal Cancer

Loupakis, F., Pollina, L., Stasi, I., Ruzzo, A., Scartozzi, M., Santini, D., Masi, G., Graziano, F., Cremolini, C., Rulli, E., Canestrari, E., Funel, N., Schiavon, G., Petrini, I., Magnani, M., Tonini

Journal:

Journal of Clinical Oncology

Year:

2009

Language:

english

File:

PDF, 736 KB

english, 2009

94

[IEEE 2012 IEEE 20th Annual International Symposium on Field-Programmable Custom Computing Machines (FCCM) - Toronto, ON, Canada (2012.04.29-2012.05.1)] 2012 IEEE 20th International Symposium on Field-Programmable Custom Computing Machines - Hardware Acceleration of Short Read Mapping

Olson, Corey B., Kim, Maria, Clauson, Cooper, Kogon, Boris, Ebeling, Carl, Hauck, Scott, Ruzzo, Walter L.

Year:

2012

Language:

english

File:

PDF, 278 KB

english, 2012

95

[IEEE Comput. Soc. Press [1990] 31st Annual Symposium on Foundations of Computer Science - St. Louis, MO, USA (22-24 Oct. 1990)] Proceedings [1990] 31st Annual Symposium on Foundations of Computer Science - Time-space tradeoffs for undirected graph traversal

Beame, P., Borodin, A., Raghavan, P., Ruzzo, W.L., Tompa, M.

Year:

1990

Language:

english

File:

PDF, 939 KB

english, 1990

96

[IEEE 20th Annual Symposium on Foundations of Computer Science (sfcs 1979) - San Juan, Puerto Rico (1979.10.29-1979.10.31)] 20th Annual Symposium on Foundations of Computer Science (sfcs 1979) - On uniform circuit complexity

Ruzzo, Walter L.

Year:

1979

Language:

english

File:

PDF, 843 KB

english, 1979

97

Pharmacogenetic Profiling in Patients With Advanced Colorectal Cancer Treated With First-Line FOLFOX-4 Chemotherapy

Ruzzo, A., Graziano, F., Loupakis, F., Rulli, E., Canestrari, E., Santini, D., Catalano, V., Ficarelli, R., Maltese, P., Bisonni, R., Masi, G., Schiavon, G., Giordani, P., Giustini, L., Falcone, A., T

Journal:

Journal of Clinical Oncology

Year:

2007

Language:

english

File:

PDF, 140 KB

english, 2007

98

Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data

Peng, Xinxia, Pipes, Lenore, Xiong, Hao, Green, Richard R., Jones, Daniel C., Ruzzo, Walter L., Schroth, Gary P., Mason, Christopher E., Palermo, Robert E., Katze, Michael G.

Journal:

Journal of Medical Primatology

Year:

2014

Language:

english

File:

PDF, 715 KB

english, 2014

99

Prospective study of EGFR intron 1 (CA)n repeats variants as predictors of benefit from cetuximab and irinotecan in chemo-refractory metastatic colorectal cancer (mCRC) patients

Loupakis, F, Antoniotti, C, Cremolini, C, Zhang, W, Yang, D, Wakatsuki, T, Bohanes, P, Schirripa, M, Salvatore, L, Masi, G, Ricci, V, Graziano, F, Ruzzo, A, Benhaim, L, Marmorino, F, Ning, Y, El-Khoue

Journal:

The Pharmacogenomics Journal

Year:

2014

Language:

english

File:

PDF, 462 KB

english, 2014

100

Sequence-based heuristics for faster annotation of non-coding RNA families

Weinberg, Z., Ruzzo, W. L.

Journal:

Year:

2006

Language:

english

File:

PDF, 141 KB

english, 2006

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