S. Durdagi: search on Z-Library

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1

Teacher self-efficacy, academic self-efficacy, and computer self-efficacy as predictors of attitude toward applying computer-supported education

Yeşilyurt, Etem, Ulaş, Abdulhak Halim, Akan, Durdağı

Journal:

Computers in Human Behavior

Year:

2016

Language:

english

File:

PDF, 2.06 MB

english, 2016

2

Strategies in the Rational Drug Design

T. Mavromoustakos, S. Durdagi, C. Koukoulitsa, M. Simcic, M. G. Papadopoulos, M. Hodoscek, S. Golic Grdadolnik

Year:

2011

Language:

english

File:

PDF, 758 KB

english, 2011

3

Discovery of Klotho peptide antagonists against Wnt3 and Wnt3a target proteins using combination of protein engineering, protein–protein docking, peptide docking and molecular dynamics simulations

Mirza, Shaher Bano, Ekhteiari Salmas, Ramin, Fatmi, M. Qaiser, Durdagi, Serdar

Journal:

Journal of Enzyme Inhibition and Medicinal Chemistry

Year:

2016

Language:

english

File:

PDF, 2.26 MB

english, 2016

4

Investigation of Inhibition Mechanism of Chemokine Receptor CCR5 by Micro-second Molecular Dynamics Simulations

Salmas, Ramin Ekhteiari, Yurtsever, Mine, Durdagi, Serdar

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 2.43 MB

english, 2015

5

In vitro and in silico approaches to appraise Polygonum maritimum L. as a source of innovative products with anti-ageing potential

Rodrigues, Maria João, Slusarczyk, Sylwester, Pecio, Łukasz, Matkowski, Adam, Salmas, Ramin Ekhteiari, Durdagi, Serdar, Pereira, Catarina, Varela, João, Barreira, Luísa, Custódio, Luísa

Journal:

Industrial Crops and Products

Year:

2018

Language:

english

File:

PDF, 692 KB

english, 2018

6

Novel MAO-B Hit Inhibitors Using Multidimensional Molecular Modeling Approaches and Application of Binary QSAR Models for Prediction of their Therapeutic Activity and Toxic Effects

Is, Yusuf Serhat, Durdagi, Serdar, Aksoydan, Busecan, Yurtsever, Mine

Journal:

ACS Chemical Neuroscience

Year:

2018

Language:

english

File:

PDF, 3.71 MB

english, 2018

7

Relationship Between School Managers’ Conflict Management Styles and Interpersonal Cognitive Distortions

Yildirim, Isa, Akan, Durdagi, Yalçin, Sinan

Journal:

Journal of Social Sciences

Year:

2015

Language:

english

File:

PDF, 252 KB

english, 2015

8

Identifying new piperazine-based PARP1 inhibitors using text mining and integrated molecular modeling approaches

Sahin, Kader, Durdagi, Serdar

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2020

File:

PDF, 2.20 MB

2020

9

3D QSAR CoMFA/CoMSIA, molecular docking and molecular dynamics studies of fullerene-based HIV-1 PR inhibitors

Serdar Durdagi, Thomas Mavromoustakos, Manthos G. Papadopoulos

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2008

Language:

english

File:

PDF, 686 KB

english, 2008

10

Comparative molecular dynamics simulations of the potent synthetic classical cannabinoid ligand AMG3 in solution and at binding site of the CB1 and CB2 receptors

Serdar Durdagi, Heribert Reis, Manthos G. Papadopoulos, Thomas Mavromoustakos

Journal:

Bioorganic & Medicinal Chemistry

Year:

2008

Language:

english

File:

PDF, 2.02 MB

english, 2008

11

Computational design of novel fullerene analogues as potential HIV-1 PR inhibitors: Analysis of the binding interactions between fullerene inhibitors and HIV-1 PR residues using 3D QSAR, molecular docking and molecular dynamics simulations

Serdar Durdagi, Thomas Mavromoustakos, Nikos Chronakis, Manthos G. Papadopoulos

Journal:

Bioorganic & Medicinal Chemistry

Year:

2008

Language:

english

File:

PDF, 1.60 MB

english, 2008

12

Kinetic and docking studies of phenol-based inhibitors of carbonic anhydrase isoforms I, II, IX and XII evidence a new binding mode within the enzyme active site

Serdar Durdagi, Murat Şentürk, Deniz Ekinci, Halis Türker Balaydın, Süleyman Göksu, Ö. İrfan Küfrevioğlu, Alessio Innocenti, Andrea Scozzafava, Claudiu T. Supuran

Journal:

Bioorganic & Medicinal Chemistry

Year:

2011

Language:

english

File:

PDF, 1.67 MB

english, 2011

13

Combined 3D QSAR and molecular docking studies to reveal novel cannabinoid ligands with optimum binding activity

Serdar Durdagi, Manthos G. Papadopoulos, Demetris P. Papahatjis, Thomas Mavromoustakos

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2007

Language:

english

File:

PDF, 736 KB

english, 2007

14

Structural and dynamical properties of Bi3+ in water

Serdar Durdagi, Thomas S. Hofer, Bernhard R. Randolf, Bernd M. Rode

Journal:

Chemical Physics Letters

Year:

2005

Language:

english

File:

PDF, 160 KB

english, 2005

15

Development of accurate binding affinity predictions of novel renin inhibitors through molecular docking studies

Aggeliki Politi, Serdar Durdagi, Panagiota Moutevelis-Minakakis, George Kokotos, Thomas Mavromoustakos

Journal:

Journal of Molecular Graphics and Modelling

Year:

2010

Language:

english

File:

PDF, 705 KB

english, 2010

16

Structural refinement of the hERG1 pore and voltage-sensing domains with ROSETTA-membrane and molecular dynamics simulations

Julia Subbotina, Vladimir Yarov-Yarovoy, James Lees-Miller, Serdar Durdagi, Jiqing Guo, Henry J. Duff, Sergei Yu. Noskov

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1018 KB

english, 2010

17

Partial interdigitation of lipid bilayers

Thomas Mavromoustakos, Petros Chatzigeorgiou, Catherine Koukoulitsa, Serdar Durdagi

Journal:

International Journal of Quantum Chemistry

Year:

2011

Language:

english

File:

PDF, 1.41 MB

english, 2011

18

Comparison of thermal effects of stilbenoid analogs in lipid bilayers using differential scanning calorimetry and molecular dynamics: correlation of thermal effects and topographical position with antioxidant activity

Catherine Koukoulitsa, Serdar Durdagi, Eleni Siapi, Carolina Villalonga-Barber, Xanthippi Alexi, Barry R. Steele, Maria Micha-Screttas, Michael N. Alexis, Anna Tsantili-Kakoulidou, Thomas Mavromoustak

Journal:

European Biophysics Journal

Year:

2011

Language:

english

File:

PDF, 715 KB

english, 2011

19

Does the donor–acceptor concept work for designing synthetic metals?

Ulrike Salzner, Ozan Karaltı, Serdar Durdaği

Journal:

Journal of Molecular Modeling

Year:

2006

Language:

english

File:

PDF, 283 KB

english, 2006

20

An efficient synthesis of a rationally designed 1,5 disubstituted imidazole AT1Angiotensin II receptor antagonist: reorientation of imidazole pharmacophore groups in losartan reserves high receptor affinity and confirms docking studies

George Agelis, Panagiota Roumelioti, Amalia Resvani, Serdar Durdagi, Maria-Eleni Androutsou, Konstantinos Kelaidonis, Demetrios Vlahakos, Thomas Mavromoustakos, John Matsoukas

Journal:

Journal of Computer-Aided Molecular Design

Year:

2010

Language:

english

File:

PDF, 504 KB

english, 2010

21

Binding of novel fullerene inhibitors to HIV-1 protease: insight through molecular dynamics and molecular mechanics Poisson–Boltzmann surface area calculations

Haralambos Tzoupis, Georgios Leonis, Serdar Durdagi, Varnavas Mouchlis, Thomas Mavromoustakos, Manthos G. Papadopoulos

Journal:

Journal of Computer-Aided Molecular Design

Year:

2011

Language:

english

File:

PDF, 2.63 MB

english, 2011

22

A computational study on cannabinoid receptors and potent bioactive cannabinoid ligands: homology modeling, docking, de novo drug design and molecular dynamics analysis

Serdar Durdagi, Manthos G. Papadopoulos, Panagiotis G. Zoumpoulakis, Catherine Koukoulitsa, Thomas Mavromoustakos

Journal:

Molecular Diversity

Year:

2010

Language:

english

File:

PDF, 2.56 MB

english, 2010

23

Nanoscale enzyme inhibitors: Fullerenes inhibit carbonic anhydrase by occluding the active site entrance

Alessio Innocenti, Serdar Durdagi, Nadjmeh Doostdar, T. Amanda Strom, Andrew R. Barron, Claudiu T. Supuran

Journal:

Bioorganic & Medicinal Chemistry

Year:

2010

Language:

english

File:

PDF, 567 KB

english, 2010

24

Application of 3D QSAR CoMFA/CoMSIA and in silico docking studies on novel renin inhibitors against cardiovascular diseases

Aggeliki Politi, Serdar Durdagi, Panagiota Moutevelis-Minakakis, George Kokotos, Manthos G. Papadopoulos, Thomas Mavromoustakos

Journal:

European Journal of Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 2.11 MB

english, 2009

25

Protein–Protein Interactions: Inhibition of Mammalian Carbonic Anhydrases I–XV by the Murine Inhibitor of Carbonic Anhydrase and Other Members of the Transferrin Family

Durdagi, Serdar, Vullo, Daniela, Pan, Peiwen, Kähkönen, Niklas, Määttä, Juha A., Hytönen, Vesa P., Scozzafava, Andrea, Parkkila, Seppo, Supuran, Claudiu T.

Journal:

Journal of Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 534 KB

english, 2012

26

Design, synthesis and biological evaluation of novel nitroaromatic compounds as potent glutathione reductase inhibitors

Reşit Çakmak, Serdar Durdagi, Deniz Ekinci, Murat Şentürk, Giray Topal

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2011

Language:

english

File:

PDF, 974 KB

english, 2011

27

An effort to discover the preferred conformation of the potent AMG3 cannabinoid analog when reaching the active sites of the cannabinoid receptors

Serdar Durdagi, Manthos G. Papadopoulos, Thomas Mavromoustakos

Journal:

European Journal of Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 1.36 MB

english, 2012

28

Structure–activity relationships for the interaction of 5,10-dihydroindeno[1,2-b]indole derivatives with human and bovine carbonic anhydrase isoforms I, II, III, IV and VI

Deniz Ekinci, Hüseyin Çavdar, Serdar Durdagi, Oktay Talaz, Murat Şentürk, Claudiu T. Supuran

Journal:

European Journal of Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 480 KB

english, 2012

29

IPV4/IPV6 security and threat comparisons

Emre Durdağı, Ali Buldu

Journal:

Procedia - Social and Behavioral Sciences

Year:

2010

Language:

english

File:

PDF, 354 KB

english, 2010

30

Combined Receptor and Ligand-Based Approach to the Universal Pharmacophore Model Development for Studies of Drug Blockade to the hERG1 Pore Domain

Durdagi, Serdar, Duff, Henry J., Noskov, Sergei Yu.

Journal:

Journal of Chemical Information and Modeling

Year:

2011

Language:

english

File:

PDF, 1.08 MB

english, 2011

31

Modeling of Open, Closed, and Open-Inactivated States of the hERG1 Channel: Structural Mechanisms of the State-Dependent Drug Binding

Durdagi, Serdar, Deshpande, Sumukh, Duff, Henry J, Noskov, Sergei Y.

Journal:

Journal of Chemical Information and Modeling

Year:

2012

Language:

english

File:

PDF, 2.20 MB

english, 2012

32

Interactions at the bilayer interface and receptor site induced by the novel synthetic pyrrolidinone analog MMK3

C. Fotakis, S. Gega, E. Siapi, C. Potamitis, K. Viras, P. Moutevelis-Minakakis, C.G. Kokotos, S. Durdagi, S. Golic Grdadolnik, B. Sartori, M. Rappolt, T. Mavromoustakos

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2010

Language:

english

File:

PDF, 1.69 MB

english, 2010

33

In Silico Drug Screening Approach for the Design of Magic Bullets: A Successful Example with Anti-HIV Fullerene Derivatized Amino Acids

Durdagi, Serdar, Supuran, Claudiu T., Strom, T. Amanda, Doostdar, Nadjmeh, Kumar, Mananjali K., Barron, Andrew R., Mavromoustakos, Thomas, Papadopoulos, Manthos G.

Journal:

Journal of Chemical Information and Modeling

Year:

2009

Language:

english

File:

PDF, 2.02 MB

english, 2009

34

Kinetic and in silico analysis of thiazolidin-based inhibitors of α-carbonic anhydrase isoenzymes

Ekinci, Deniz, Fidan, İsmail, Durdagi, Serdar, Kaban, Şeniz, Supuran, Claudiu T.

Journal:

Journal of Enzyme Inhibition and Medicinal Chemistry

Year:

2013

Language:

english

File:

PDF, 879 KB

english, 2013

35

The Application of 3D-QSAR Studies for Novel Cannabinoid Ligands Substituted at the C1‘ Position of the Alkyl Side Chain on the Structural Requirements for Binding to Cannabinoid Receptors CB1 and CB2

Durdagi, Serdar, Kapou, Agnes, Kourouli, Therapia, Andreou, Thanos, Nikas, Spyros P., Nahmias, Victoria R., Papahatjis, Demetris P., Papadopoulos, Manthos G., Mavromoustakos, Thomas

Journal:

Journal of Medicinal Chemistry

Year:

2007

Language:

english

File:

PDF, 432 KB

english, 2007

36

Molecular insights into the AT1antagonism based on biophysical and in silico studies of telmisartan

Kritsi, Eftichia, Potamitis, Constantinos, Durdagi, Serdar, Zoumpoulakis, Panagiotis, Golic Grdadolnik, Simona, Mavromoustakos, Thomas

Journal:

Medicinal Chemistry Research

Year:

2013

Language:

english

File:

PDF, 1.03 MB

english, 2013

37

The discovery of new potent non-peptide Angiotensin II AT1 receptor blockers: A concise synthesis, molecular docking studies and biological evaluation of N-substituted 5-butylimidazole derivatives

Agelis, George, Resvani, Amalia, Durdagi, Serdar, Spyridaki, Katerina, Tůmová, Tereza, Slaninová, Jiřina, Giannopoulos, Panagiotis, Vlahakos, Demetrios, Liapakis, George, Mavromoustakos, Thomas, Matso

Journal:

European Journal of Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 1.63 MB

english, 2012

38

Antihypertensive Drug Valsartan in Solution and at the AT 1 Receptor: Conformational Analysis, Dynamic NMR Spectroscopy, in Silico Docking, and Molecular Dynamics Simulations

Potamitis, Constantinos, Zervou, Maria, Katsiaras, Vassilis, Zoumpoulakis, Panagiotis, Durdagi, Serdar, Papadopoulos, Manthos G., Hayes, Joseph M., Grdadolnik, Simona Golic, Kyrikou, Ioanna, Argyropou

Journal:

Journal of Chemical Information and Modeling

Year:

2009

Language:

english

File:

PDF, 2.91 MB

english, 2009

39

3D QSAR/CoMFA and CoMSIA Studies on Antileukemic Steroidal Esters Coupled with Conformationally Flexible Nitrogen Mustards

Kapou, Agnes, Benetis, Nikolas-P., Durdagi, Serdar, Nikolaropoulos, Sotiris, Mavromoustakos, Thomas

Journal:

Journal of Chemical Information and Modeling

Year:

2008

Language:

english

File:

PDF, 984 KB

english, 2008

40

Inhibition of mammalian carbonic anhydrases I-XIV with grayanotoxin III: solution and in silico studies

Durdagi, Serdar, Scozzafava, Gabriele, Vullo, Daniela, Sahin, Hüseyin, Kolayli, Sevgi, Supuran, Claudiu T.

Journal:

Journal of Enzyme Inhibition and Medicinal Chemistry

Year:

2014

Language:

english

File:

PDF, 689 KB

english, 2014

41

Synthesis of 1,4-bis(indolin-1-ylmethyl)benzene derivatives and their structure–activity relationships for the interaction of human carbonic anhydrase isoforms I and II

Talaz, Oktay, Çavdar, Hüseyin, Durdagi, Serdar, Azak, Hacer, Ekinci, Deniz

Journal:

Bioorganic & Medicinal Chemistry

Year:

2013

Language:

english

File:

PDF, 624 KB

english, 2013

42

AT1 antagonists: a patent review (2008 – 2012)

Mavromoustakos, Thomas, Agelis, George, Durdagi, Serdar

Journal:

Expert Opinion on Therapeutic Patents

Year:

2013

Language:

english

File:

PDF, 1.42 MB

english, 2013

43

Insights into the molecular basis of action of the AT1 antagonist losartan using a combined NMR spectroscopy and computational approach

Zervou, Maria, Cournia, Zoe, Potamitis, Constantinos, Patargias, George, Durdagi, Serdar, Grdadolnik, Simona Golic, Mavromoustakos, Thomas

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2014

Language:

english

File:

PDF, 2.85 MB

english, 2014

44

Designing of multi-targeted molecules using combination of molecular screening and in silico drug cardiotoxicity prediction approaches

Buturak, Birce, Durdagi, Serdar, Noskov, Sergei Y., Ildeniz, A. Tugba Ozal

Journal:

Journal of Molecular Graphics and Modelling

Year:

2014

Language:

english

File:

PDF, 11.02 MB

english, 2014

45

Development and Validation Studies of Universal Pharmacophore Models for hERG Channel Openers

Durdagi, Serdar, Patterson, Matthew, Noskov, Sergei Y.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 41 KB

english, 2014

46

Development of Atomistic Models for Closed, Open and Open-Inactivated States of hERG1 Channel using Rosetta Protein Modeling Suite and Molecular Dynamics Simulations

Durdagi, Serdar, Deshpande, Sumukh, Duff, Henry, Noskov, Sergei

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 40 KB

english, 2012

47

Effect of applied external magnetic field on the L X-ray emission line structures of the lanthanide elements

Durdağı, Sevil

Journal:

Radiation Physics and Chemistry

Year:

2013

Language:

english

File:

PDF, 988 KB

english, 2013

48

Rehabilitation Studies for withdrawn Drugs from the Market: Derivation of Non-hERG1 Channel Blocker Cisapride Analogues using Multi-Faceted Approaches

Durdagi, Serdar, Randal, Trevor, Duff, Henry J., Noskov, Sergei Y.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 41 KB

english, 2013

49

Identification of Novel Cholesterol Binding Regions in the Transmembrane Domain of Kir2.1

Rosenhouse-Dantsker, Avia, Noskov, Sergei, Durdagi, Serdar, Logothetis, Diomedes E., Levitan, Irena

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 49 KB

english, 2014

50

Rehabilitating drug-induced long-QT promoters:In-silicodesign of hERG-neutral cisapride analogues with retained pharmacological activity

Durdagi, Serdar, Randall, Trevor, Duff, Henry J, Chamberlin, Adam, Noskov, Sergei Y

Journal:

BMC Pharmacology and Toxicology

Year:

2014

Language:

english

File:

PDF, 1.46 MB

english, 2014