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51

Signal-CF: A subsite-coupled and window-fusing approach for predicting signal peptides

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 808 KB

english, 2007

52

MemType-2L: A Web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 363 KB

english, 2007

53

Signal-3L: A 3-layer approach for predicting signal peptides

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 199 KB

english, 2007

54

EzyPred: A top–down approach for predicting enzyme functional classes and subclasses

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 687 KB

english, 2007

55

ProtIdent: A web server for identifying proteases and their types by fusing functional domain and sequential evolution information

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Biochemical and Biophysical Research Communications

Year:

2008

Language:

english

File:

PDF, 227 KB

english, 2008

56

Towards better accuracy for missing value estimation of epistatic miniarray profiling data by a novel ensemble approach

Xiao-Yong Pan, Ye Tian, Yan Huang, Hong-Bin Shen

Journal:

Year:

2011

Language:

english

File:

PDF, 677 KB

english, 2011

57

NeuroD1 A45T and PAX4 R121W polymorphisms are associated with plasma glucose level of repaglinide monotherapy in Chinese patients with type 2 diabetes

Zhi-Cheng Gong, Qiong Huang, Xing-Ping Dai, Guang-Hua Lei, Hong-Bin Lu, Ji-Ye Yin, Xiao-Jing Xu, Jian Qu, Qi Pei, Min Dong, Bo-Ting Zhou, Jie Shen, Gan Zhou, Hong-Hao Zhou, Zhao-Qian Liu

Journal:

British Journal of Clinical Pharmacology

Year:

2012

Language:

english

File:

PDF, 963 KB

english, 2012

58

TargetATPsite: A template-free method for ATP-binding sites prediction with residue evolution image sparse representation and classifier ensemble

Yu, Dong-Jun, Hu, Jun, Huang, Yan, Shen, Hong-Bin, Qi, Yong, Tang, Zhen-Min, Yang, Jing-Yu

Journal:

Journal of Computational Chemistry

Year:

2013

Language:

english

File:

PDF, 1.84 MB

english, 2013

59

Analysis for temporal gene expressions under multiple biological conditions

Hong-Bin Fang, Dianliang Deng, Guo-Liang Tian, Lixin Shen, Kangmin Duan, Jiuzhou Song

Journal:

Statistics in Biosciences

Year:

2012

Language:

english

File:

PDF, 666 KB

english, 2012

60

A predicted protein interactome for rice

Chai-Ling Ho, Yingzhou Wu, Hong-bin Shen, Nicholas J Provart, Matt Geisler

Journal:

Year:

2012

Language:

english

File:

PDF, 1.17 MB

english, 2012

61

LabCaS: Labeling calpain substrate cleavage sites from amino acid sequence using conditional random fields

Fan, Yong-Xian, Zhang, Yang, Shen, Hong-Bin

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 2.48 MB

english, 2013

62

Learning protein multi-view features in complex space

Yu, Dong-Jun, Hu, Jun, Wu, Xiao-Wei, Shen, Hong-Bin, Chen, Jun, Tang, Zhen-Min, Yang, Jian, Yang, Jing-Yu

Journal:

Year:

2013

Language:

english

File:

PDF, 693 KB

english, 2013

63

Large-Scale Prediction of Human Protein−Protein Interactions from Amino Acid Sequence Based on Latent Topic Features

Pan, Xiao-Yong, Zhang, Ya-Nan, Shen, Hong-Bin

Journal:

Journal of Proteome Research

Year:

2010

Language:

english

File:

PDF, 1.40 MB

english, 2010

64

REVIEW : Recent advances in developing web-servers for predicting protein attributes

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Natural Science

Year:

2009

Language:

english

File:

PDF, 5.82 MB

english, 2009

65

HierTrack: an energy-efficient cluster-based target tracking system forwireless sensor networks

Wang, Zhi-bo, Wang, Zhi, Chen, Hong-long, Li, Jian-feng, Li, Hong-bin, Shen, Jie

Journal:

Journal of Zhejiang University SCIENCE C

Year:

2013

Language:

english

File:

PDF, 830 KB

english, 2013

66

Spinel Li4Ti5−xZrxO12 (0⩽x⩽0.25) materials as high-performance anode materials for lithium-ion batteries

Yi, Ting-Feng, Chen, Bin, Shen, Hao-Yu, Zhu, Rong-Sun, Zhou, An-Na, Qiao, Hong-Bin

Journal:

Journal of Alloys and Compounds

Year:

2013

Language:

english

File:

PDF, 1.09 MB

english, 2013

67

SPIE Proceedings [SPIE ISPDI 2013 - Fifth International Symposium on Photoelectronic Detection and Imaging - Beijing, China (Tuesday 25 June 2013)] International Symposium on Photoelectronic Detection and Imaging 2013: Infrared Imaging and Applications - Design method of ARM based infrared camouflage target recognition system

Wang, Yuan-bo, Shen, Hong-bin, Li, Gang, Gong, Haimei, Shi, Zelin, Chen, Qian, Lu, Jin

Year:

2013

Language:

english

File:

PDF, 317 KB

english, 2013

68

Enantioselective Total Synthesis of (−)-Limaspermidine and Formal Synthesis of (−)-1-Acetylaspidoalbidine

Zhang, Shao-Xiong, Shen, Xiao-Lei, Li, Ze-Qian, Zou, Li-Wei, Wang, Feng-Qun, Zhang, Hong-Bin, Shao, Zhi-Hui

Journal:

Journal of Organic Chemistry

Year:

2013

Language:

english

File:

PDF, 592 KB

english, 2013

69

Enantioselective Total Synthesis of (−)-Limaspermidine and Formal Synthesis of (−)-1-Acetylaspidoalbidine

Zhang, Shao-Xiong, Shen, Xiao-Lei, Li, Ze-Qian, Zou, Li-Wei, Wang, Feng-Qun, Zhang, Hong-Bin, Shao, Zhi-Hui

Journal:

Journal of Organic Chemistry

Year:

2014

File:

PDF, 142 KB

2014

70

Designing Template-Free Predictor for Targeting Protein-Ligand Binding Sites with Classifier Ensemble and Spatial Clustering

Yu, Dong-Jun, Hu, Jun, Yang, Jing, Shen, Hong-Bin, Tang, Jinhui, Yang, Jing-Yu

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 2.04 MB

english, 2013

71

Predicting pupylation sites in prokaryotic proteins using pseudo-amino acid composition and extreme learning machine

Fan, Yong-Xian, Shen, Hong-Bin

Journal:

Year:

2014

Language:

english

File:

PDF, 658 KB

english, 2014

72

Improving protein-ATP binding residues prediction by boosting SVMs with random under-sampling

Yu, Dong-Jun, Hu, Jun, Tang, Zhen-Min, Shen, Hong-Bin, Yang, Jian, Yang, Jing-Yu

Journal:

Year:

2013

Language:

english

File:

PDF, 705 KB

english, 2013

73

Image-based classification of protein subcellular location patterns in human reproductive tissue by ensemble learning global and local features

Yang, Fan, Xu, Ying-Ying, Wang, Shi-Tong, Shen, Hong-Bin

Journal:

Year:

2014

Language:

english

File:

PDF, 1.25 MB

english, 2014

74

Monomeric Pd(II) complexes with trans-chelated pyrazole ligands as effective pre-catalysts for Heck cross-coupling reaction under mild aerobic conditions

Chou, Chang-Chuan, Yang, Chia-Chi, Syu, Hong-Bin, Kuo, Ting-Shen

Journal:

Journal of Organometallic Chemistry

Year:

2013

Language:

english

File:

PDF, 848 KB

english, 2013

75

Spinal neuroimmune activation inhibited by repeated administration of pioglitazone in rats after L5 spinal nerve transection

Jia, Hong-bin, Wang, Xing-ming, Qiu, Li-li, Liu, Xiao-yu, Shen, Jin-chun, Ji, Qing, Yang, Jian-jun

Journal:

Neuroscience Letters

Year:

2013

Language:

english

File:

PDF, 1.02 MB

english, 2013

76

Catalytic Enantioselective and Divergent Total Synthesis of (+)-10-Oxocylindrocarpidine, (+)-Cylindrocarpidine, (−)- N -Acetylcylindrocarpinol, and (+)-Aspidospermine

Shen, Xiao-Lei, Zhao, Rui-Rui, Mo, Ming-Jie, Peng, Fang-Zhi, Zhang, Hong-Bin, Shao, Zhi-Hui

Journal:

Journal of Organic Chemistry

Year:

2014

Language:

english

File:

PDF, 457 KB

english, 2014

77

GFO: A data driven approach for optimizing the Gaussian function based similarity metric in computational biology

Lei, Jian-Bo, Yin, Jiang-Bo, Shen, Hong-Bin

Journal:

Year:

2013

Language:

english

File:

PDF, 786 KB

english, 2013

78

Reversal of doxorubicin resistance by guggulsterone of Commiphora mukul in vivo

Xu, Hong-Bin, Shen, Zhao-Li, Fu, Jin, Xu, Lu-Zhong

Journal:

Year:

2014

Language:

english

File:

PDF, 4.14 MB

english, 2014

79

OptiFel: A Convergent Heterogeneous Particle Swarm Optimization Algorithm for Takagi–Sugeno Fuzzy Modeling

Cheung, Ngaam J., Ding, Xue-Ming, Shen, Hong-Bin

Journal:

IEEE Transactions on Fuzzy Systems

Year:

2014

Language:

english

File:

PDF, 2.44 MB

english, 2014

80

Euk-mPLoc: A Fusion Classifier for Large-Scale Eukaryotic Protein Subcellular Location Prediction by Incorporating Multiple Sites

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 156 KB

english, 2007

81

Large-Scale Predictions of Gram-Negative Bacterial Protein Subcellular Locations

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 194 KB

english, 2006

82

[IEEE 2011 IEEE International Conference on Systems Biology (ISB) - Zhuhai, China (2011.09.2-2011.09.4)] 2011 IEEE International Conference on Systems Biology (ISB) - Predicting functional impact of single amino acid polymorphisms by integrating sequence and structural features

Mingjun Wang,, Hong-Bin Shen,, Akutsu, Tatsuya, Song, Jiangning

Year:

2011

Language:

english

File:

PDF, 685 KB

english, 2011

83

QuatIdent: A Web Server for Identifying Protein Quaternary Structural Attribute by Fusing Functional Domain and Sequential Evolution Information

Shen, Hong-Bin, Chou, Kuo-Chen

Journal:

Journal of Proteome Research

Year:

2009

Language:

english

File:

PDF, 2.18 MB

english, 2009

84

Predicting Eukaryotic Protein Subcellular Location by Fusing Optimized Evidence-Theoretic K-Nearest Neighbor Classifiers

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 234 KB

english, 2006

85

Virus-mPLoc: A Fusion Classifier for Viral Protein Subcellular Location Prediction by Incorporating Multiple Sites

Shen, Hong-Bin, Chou, Kuo-Chen

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2010

Language:

english

File:

PDF, 892 KB

english, 2010

86

Hierarchical particle swarm optimizer for minimizing the non-convex potential energy of molecular structure

Cheung, Ngaam J., Shen, Hong-Bin

Journal:

Journal of Molecular Graphics and Modelling

Year:

2014

Language:

english

File:

PDF, 1.89 MB

english, 2014

87

[IEEE 2009 Chinese Conference on Pattern Recognition (CCPR) - Nanjing, China (2009.11.4-2009.11.6)] 2009 Chinese Conference on Pattern Recognition - Prediction of Protein B-Factor Profile Based on Feature Selection and Kernel Learning

Pan, Xiao-Yong, Shen, Hong-Bin

Year:

2009

File:

PDF, 386 KB

2009

88

The Structure and Defect Formation Energy in Tetragonal PbTiO 3 : Ab Initio Calculation

Ge, Fang-Fang, Wu, Wei-Dong, Cao, Lin-Hong, Wang, Xue-Min, Wang, Hai-Ping, Dai, Yang, Wang, Hong-Bin, Shen, Jun

Journal:

Year:

2010

Language:

english

File:

PDF, 137 KB

english, 2010

89

[IEEE 2011 International Conference on Modelling, Identification and Control - Shanghai (2011.06.26-2011.06.29)] Proceedings of 2011 International Conference on Modelling, Identification and Control - Robust ART-2 neural network learning framework

Jiang-Bo Yin,, Hong-Bin Shen,

Year:

2011

Language:

english

File:

PDF, 265 KB

english, 2011

90

Nuclear erythroid 2 p45-related factor–2 Nrf2 ameliorates cigarette smoking-induced mucus overproduction in airway epithelium and mouse lungs

Ying, Ying-Hua, Lin, Xiao-Ping, Zhou, Hong-bin, Wu, Yin-fang, Yan, Fu-gui, Hua, Wen, Xia, Li-Xia, Qiu, Zhang-wei, Chen, Zhi-Hua, Li, Wen, Shen, Hua-Hao

Journal:

Microbes and Infection

Year:

2014

Language:

english

File:

PDF, 1.82 MB

english, 2014

91

Balance of apoptotic cell death and survival in allergic diseases

Tian, Bao-Ping, Zhou, Hong-Bin, Xia, Li-Xia, Shen, Hua-Hao, Ying, Songmin

Journal:

Microbes and Infection

Year:

2014

Language:

english

File:

PDF, 1.28 MB

english, 2014

92

[IEEE 2010 Chinese Conference on Pattern Recognition (CCPR) - Chongqing, China (2010.10.21-2010.10.23)] 2010 Chinese Conference on Pattern Recognition (CCPR) - Feature Fusion and Selection for Recognizing Cancer-Related Mutations from Common Polymorphisms

Lei, Jian-Bo, Yin, Jiang-Bo, Shen, Hong-Bin

Year:

2010

Language:

english

File:

PDF, 224 KB

english, 2010

93

Methodology development for predicting subcellular localization and other attributes of proteins

Shen, Hong-Bin, Yang, Jie, Chou, Kuo-Chen

Journal:

Expert Review of Proteomics

Year:

2007

Language:

english

File:

PDF, 250 KB

english, 2007

94

[IEEE 2010 Chinese Conference on Pattern Recognition (CCPR) - Chongqing, China (2010.10.21-2010.10.23)] 2010 Chinese Conference on Pattern Recognition (CCPR) - Conotoxin Superfamily Prediction Based on Diffusion Maps and dHKNN

Yin, Jiang-Bo, Lei, Jian-Bo, Fan, Yong-Xian, Shen, Hong-Bin

Year:

2010

File:

PDF, 406 KB

2010

95

Successful treatment of a patient with congenital kyphoscoliosis associated with tethered cord

Tao, Hui-Ren, Yang, Tian-Li, Chang, Michael S., Li, Huan, Zhang, Da-Wei, Fan, Hong-Bin, Shen, Chao, Luo, Zhuo-Jing

Journal:

Journal of Neurosurgery Spine

Year:

2015

Language:

english

File:

PDF, 4.92 MB

english, 2015

96

Preparation and utilization of phosphate biofertilizers using agricultural waste

WANG, Hong-yuan, LIU, Shen, ZHAI, Li-mei, ZHANG, Ji-zong, REN, Tian-zhi, FAN, Bing-quan, LIU, Hong-bin

Journal:

Journal of Integrative Agriculture

Year:

2015

Language:

english

File:

PDF, 529 KB

english, 2015

97

Improving accuracy of protein contact prediction using balanced network deconvolution

Sun, Hai-Ping, Huang, Yan, Wang, Xiao-Fan, Zhang, Yang, Shen, Hong-Bin

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 697 KB

english, 2015

98

Community mining with new node similarity by incorporating both global and local topological knowledge in a constrained random walk

Jiao, Qing-Ju, Huang, Yan, Shen, Hong-Bin

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2015

Language:

english

File:

PDF, 707 KB

english, 2015

99

Constructing Query-Driven Dynamic Machine Learning Model With Application to Protein-Ligand Binding Sites Prediction

Dong-Jun Yu,, Jun Hu,, Qian-Mu Li,, Zhen-Min Tang,, Jing-Yu Yang,, Hong-Bin Shen,

Journal:

IEEE Transactions on NanoBioscience

Year:

2015

Language:

english

File:

PDF, 2.76 MB

english, 2015

100

Capecitabine plus oxaliplatin (XELOX) compared with 5-fluorouracil/leucovorin plus oxaliplatin (FOLFOXs) in advanced gastric cancer: meta-analysis of randomized controlled trials

Xu, Hong-Bin, Huang, Fang, Su, Rui, Shen, Fu-Ming, Lv, Qian-Zhou

Journal:

European Journal of Clinical Pharmacology

Year:

2015

Language:

english

File:

PDF, 419 KB

english, 2015

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