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51

Cafe Variome: General-Purpose Software for Making Genotype-Phenotype Data Discoverable in Restricted or Open Access Contexts

Lancaster, Owen, Beck, Tim, Atlan, David, Swertz, Morris, Thangavelu, Dhiwagaran, Veal, Colin, Dalgleish, Raymond, Brookes, Anthony J

Journal:

Year:

2015

Language:

english

File:

PDF, 559 KB

english, 2015

52

A pipeline-friendly software tool for genome diagnostics to prioritize genes by matching patient symptoms to literature

van der Velde, K. Joeri, van den Hoek, Sander, van Dijk, Freerk, Hendriksen, Dennis, van Diemen, Cleo C., Johansson, Lennart F., Abbott, Kristin M., Deelen, Patrick, Sikkema-Raddatz, Birgit, Swertz, M

Journal:

Genetics & Genomics Next

Year:

2020

File:

PDF, 1.93 MB

2020

53

Fine mapping of the celiac disease-associated LPP locus reveals a potential functional variant

Almeida, R., Ricano-Ponce, I., Kumar, V., Deelen, P., Szperl, A., Trynka, G., Gutierrez-Achury, J., Kanterakis, A., Westra, H.-J., Franke, L., Swertz, M. A., Platteel, M., Bilbao, J. R., Barisani, D.,

Journal:

Human Molecular Genetics

Year:

2014

Language:

english

File:

PDF, 304 KB

english, 2014

54

Workshop on laboratory protocol standards for the molecular methods database

Klingström, Tomas, Soldatova, Larissa, Stevens, Robert, Roos, T. Erik, Swertz, Morris A., Müller, Kristian M., Kalaš, Matúš, Lambrix, Patrick, Taussig, Michael J., Litton, Jan-Eric, Landegren, Ulf, Bo

Journal:

New Biotechnology

Year:

2013

Language:

english

File:

PDF, 875 KB

english, 2013

55

European Microscopy Congress 2016: Proceedings || Energy dispersive x-ray analysis of platinum-nickel nanoparticles embedded in hollow graphitic spheres used as fuel-cell catalysts

Swertz, Ann-Christin

Year:

2016

Language:

english

File:

PDF, 2.14 MB

english, 2016

56

OntoCAT - an integrated programming toolkit for common ontology application tasks

Adamusiak, Tomasz, Kurbatova, Natalja, Swertz, Morris, Parkinson, Helen

Journal:

Bioentrepreneur

Year:

2011

File:

PDF, 143 KB

2011

57

Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases

Swertz, M. A., de Brock, E. O., van Hijum, S. A. F. T., de Jong, A., Buist, G., Baerends, R. J. S., Kok, J., Kuipers, O. P., Jansen, R. C.

Journal:

Year:

2004

Language:

english

File:

PDF, 341 KB

english, 2004

58

BiobankUniverse: automatic matchmaking between datasets for biobank data discovery and integration

Pang, Chao, Kelpin, Fleur, van Enckevort, David, Eklund, Niina, Silander, Kaisa, Hendriksen, Dennis, de Haan, Mark, Jetten, Jonathan, de Boer, Tommy, Charbon, Bart, Holub, Petr, Hillege, Hans, Swertz,

Journal:

Year:

2017

Language:

english

File:

PDF, 938 KB

english, 2017

59

Trans-fatty acids aggravate anabolic steroid-induced metabolic disturbances and differential gene expression in muscle, pancreas and adipose tissue

Vilela, Reggiani, Bernardino, Jamili, Swertz, Natanny, Guillocheau, Etienne, Eugênio, Robson, Goulart, Thaiany, Oliveira, Rafael, Cardoso, Eliziária, Dias, Rômulo

Journal:

Year:

2019

File:

PDF, 9.55 MB

2019

60

OntoCAT -- simple ontology search and integration in Java, R and REST/JavaScript

Tomasz Adamusiak, Tony Burdett, Natalja Kurbatova, K Joeri van der Velde, Niran Abeygunawardena, Despoina Antonakaki, Misha Kapushesky, Helen Parkinson, Morris A Swertz

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 496 KB

english, 2011

61

XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments

Morris A Swertz, van der K Joeri Velde, Bruno M Tesson…

Journal:

Year:

2010

Language:

english

File:

PDF, 2.09 MB

english, 2010

62

In Situ Hydrocracking of Fischer–Tropsch Hydrocarbons: CO-Prompted Diverging Reaction Pathways for Paraffin and α-Olefin Primary Products

Duyckaerts, Nicolas, Trotuş, Ioan-Teodor, Swertz, Ann-Christin, Schüth, Ferdi, Prieto, Gonzalo

Journal:

Year:

2016

Language:

english

File:

PDF, 4.26 MB

english, 2016

63

Lessons Learned from Whole Exome Sequencing in Multiplex Families Affected by a Complex Genetic Disorder, Intracranial Aneurysm

Farlow, Janice L., Lin, Hai, Sauerbeck, Laura, Lai, Dongbing, Koller, Daniel L., Pugh, Elizabeth, Hetrick, Kurt, Ling, Hua, Kleinloog, Rachel, van der Vlies, Pieter, Deelen, Patrick, Swertz, Morris A.

Journal:

Year:

2015

Language:

english

File:

PDF, 297 KB

english, 2015

64

Sulfur-modified organoclay promotes plant uptake and affects geochemical fractionation of mercury in a polluted floodplain soil

Wang, Jianxu, Shaheen, Sabry M., Swertz, Ann-Christin, Rennert, Thilo, Feng, Xinbin, Rinklebe, Jörg

Journal:

Journal of Hazardous Materials

Year:

2019

Language:

english

File:

PDF, 528 KB

english, 2019

65

OntoCAT - a simpler way to access ontology resources

Adamusiak, Tomasz, Burdett, Tony, van der Velde, K Joeri, Abeygunawardena, Niran, Antonakaki, Despoina, Parkinson, Helen, Swertz, Morris

Journal:

Bioentrepreneur

Year:

2010

File:

PDF, 490 KB

2010

66

Lack of Association Between Genetic Variants at ACE2 and TMPRSS2 Genes Involved in SARS-CoV-2 Infection and Human Quantitative Phenotypes

Lopera Maya, Esteban A., van der Graaf, Adriaan, Lanting, Pauline, van der Geest, Marije, Fu, Jingyuan, Swertz, Morris, Franke, Lude, Wijmenga, Cisca, Deelen, Patrick, Zhernakova, Alexandra, Sanna, Se

Journal:

Frontiers in Genetics

Year:

2020

File:

PDF, 1.18 MB

2020

67

Worm variation made accessible

Snoek, L Basten, Joeri van der Velde, K, Li, Yang, Jansen, Ritsert C, Swertz, Morris A, Kammenga, Jan E

Journal:

Year:

2014

Language:

english

File:

PDF, 470 KB

english, 2014

68

Toward Global Biobank Integration by Implementation of the Minimum Information About BIobank Data Sharing (MIABIS 2.0 Core)

Merino-Martinez, Roxana, Norlin, Loreana, van Enckevort, David, Anton, Gabriele, Schuffenhauer, Simone, Silander, Kaisa, Mook, Linda, Holub, Petr, Bild, Raffael, Swertz, Morris, Litton, Jan-Eric

Journal:

Biopreservation and Biobanking

Year:

2016

Language:

english

File:

PDF, 245 KB

english, 2016

69

BBMRI-ERIC Directory: 515 Biobanks with Over 60 Million Biological Samples

Holub, Petr, Swertz, Morris, Reihs, Robert, van Enckevort, David, Müller, Heimo, Litton, Jan-Eric

Journal:

Biopreservation and Biobanking

Year:

2016

Language:

english

File:

PDF, 261 KB

english, 2016

70

Towards the integration of mouse databases - definition and implementation of solutions to two use-cases in mouse functional genomics

Michael Gruenberger, Rudi Alberts, Damian Smedley, Morris Swertz, Paul Schofield, The CASIMIR consortium, Klaus Schughart

Journal:

BMC Research Notes

Year:

2010

Language:

english

File:

PDF, 1.66 MB

english, 2010

71

265 An International Patient Registry and Database for Microvillus Inclusion Disease and Associated MYO5B Mutations

Dhekne, Herschel S., Wagner, Robert, Rings, Edmond H., Swertz, Morris A., van IJzendoorn, Sven C.

Journal:

Gastroenterology

Year:

2013

Language:

english

File:

PDF, 56 KB

english, 2013

72

Nitrogen-Doped Ordered Mesoporous Carbon Supported Bimetallic PtCo Nanoparticles for Upgrading of Biophenolics

Wang, Guang-Hui, Cao, Zhengwen, Gu, Dong, Pfänder, Norbert, Swertz, Ann-Christin, Spliethoff, Bernd, Bongard, Hans-Josef, Weidenthaler, Claudia, Schmidt, Wolfgang, Rinaldi, Roberto, Schüth, Ferdi

Journal:

Angewandte Chemie International Edition

Year:

2016

Language:

english

File:

PDF, 2.44 MB

english, 2016

73

Nitrogen-Doped Ordered Mesoporous Carbon Supported Bimetallic PtCo Nanoparticles for Upgrading of Biophenolics

Wang, Guang-Hui, Cao, Zhengwen, Gu, Dong, Pfänder, Norbert, Swertz, Ann-Christin, Spliethoff, Bernd, Bongard, Hans-Josef, Weidenthaler, Claudia, Schmidt, Wolfgang, Rinaldi, Roberto, Schüth, Ferdi

Journal:

Angewandte Chemie

Year:

2016

Language:

english

File:

PDF, 2.35 MB

english, 2016

74

Neurodegenerative diseases: Lessons from genome-wide screens in small model organisms

Tjakko J. van Ham, Rainer Breitling, Morris A. Swertz, Ellen A. A. Nollen

Journal:

EMBO Molecular Medicine

Year:

2009

Language:

english

File:

PDF, 404 KB

english, 2009

75

Cohort Profile: LifeLines, a three-generation cohort study and biobank

Scholtens, S., Smidt, N., Swertz, M. A., Bakker, S. J., Dotinga, A., Vonk, J. M., van Dijk, F., van Zon, S. K., Wijmenga, C., Wolffenbuttel, B. H., Stolk, R. P.

Journal:

International Journal of Epidemiology

Year:

2014

Language:

english

File:

PDF, 309 KB

english, 2014

76

WormQTLHD--a web database for linking human disease to natural variation data in C. elegans

van der Velde, K. J., de Haan, M., Zych, K., Arends, D., Snoek, L. B., Kammenga, J. E., Jansen, R. C., Swertz, M. A., Li, Y.

Journal:

Nucleic Acids Research

Year:

2014

Language:

english

File:

PDF, 3.04 MB

english, 2014

77

The Hybrid Synthetic Microdata Platform: A Method for Statistical Disclosure Control

Kuiper, Joël, van den Heuvel, Edwin R., Swertz, Morris A.

Journal:

Biopreservation and Biobanking

Year:

2015

Language:

english

File:

PDF, 660 KB

english, 2015

78

Mutation update on the CHD7 gene involved in CHARGE syndrome

Nicole Janssen, Jorieke E. H. Bergman, Morris A. Swertz, Lisbeth Tranebjaerg, Marianne Lodahl, Jeroen Schoots, Robert M. W. Hofstra, Conny M. A. van Ravenswaaij-Arts, Lies H. Hoefsloot

Journal:

Year:

2012

Language:

english

File:

PDF, 348 KB

english, 2012

79

[IEEE 2011 19th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP) - Ayia Napa, Cyprus (2011.02.9-2011.02.11)] 2011 19th International Euromicro Conference on Parallel, Distributed and Network-Based Processing - Towards a MOLGENIS Based Computational Framework

Byelas, Heorhiy, Kanterakis, Alexandros, Swertz, Morris

Year:

2011

Language:

english

File:

PDF, 1.36 MB

english, 2011

80

Beyond standardization: dynamic software infrastructures for systems biology

Swertz, Morris A., Jansen, Ritsert C.

Journal:

Nature Reviews Genetics

Year:

2007

Language:

english

File:

PDF, 1.35 MB

english, 2007

81

xQTL workbench: a scalable web environment for multi-level QTL analysis

Arends, D., van der Velde, K. J., Prins, P., Broman, K. W., Moller, S., Jansen, R. C., Swertz, M. A.

Journal:

Year:

2012

Language:

english

File:

PDF, 424 KB

english, 2012

82

Association analysis of copy numbers of FC-gamma receptor genes for rheumatoid arthritis and other immune-mediated phenotypes

Franke, Lude, el Bannoudi, Hanane, Jansen, Diahann T S L, Kok, Klaas, Trynka, Gosia, Diogo, Dorothee, Swertz, Morris, Fransen, Karin, Knevel, Rachel, Gutierrez-Achury, Javier, Ärlestig, Lisbeth, Green

Journal:

European Journal of Human Genetics

Year:

2015

Language:

english

File:

PDF, 2.10 MB

english, 2015

83

Next-Gen Databasing Links Mutations with Prognosis and Clinical Outcome

Rolf H. Sijmons, Morris A. Swertz

Journal:

Year:

2010

Language:

english

File:

PDF, 69 KB

english, 2010

84

CoNVaDING: Single Exon Variation Detection in Targeted NGS Data

Johansson, Lennart F., van Dijk, Freerk, de Boer, Eddy N., van Dijk-Bos, Krista K., Jongbloed, Jan D.H., van der Hout, Annemieke H., Westers, Helga, Sinke, Richard J., Swertz, Morris A., Sijmons, Rolf

Journal:

Year:

2016

Language:

english

File:

PDF, 928 KB

english, 2016

85

Inter-individual variability and genetic influences on cytokine responses to bacteria and fungi

Li, Yang, Oosting, Marije, Deelen, Patrick, Ricaño-Ponce, Isis, Smeekens, Sanne, Jaeger, Martin, Matzaraki, Vasiliki, Swertz, Morris A, Xavier, Ramnik J, Franke, Lude, Wijmenga, Cisca, Joosten, Leo A

Journal:

Nature Medicine

Year:

2016

Language:

english

File:

PDF, 2.45 MB

english, 2016

86

The phenotypic spectrum of proximal 6q deletions based on a large cohort derived from social media and literature reports

Engwerda, Aafke, Frentz, Barbara, den Ouden, A. Lya, Flapper, Boudien C. T., Swertz, Morris A., Gerkes, Erica H., Plantinga, Mirjam, Dijkhuizen, Trijnie, van Ravenswaaij-Arts, Conny M. A.

Journal:

European Journal of Human Genetics

Year:

2018

Language:

english

File:

PDF, 1.19 MB

english, 2018

87

Acylselenoureato bis(chelates) of lead: synthesis, structural characterization and microwave-assisted formation of PbSe nano- and microstructures

Klauke, Karsten, Schmitz, Alexa, Swertz, Ann-Christin, Beele, BjÃ¶rn B., Giesen, Beatriz, SchlÃ¼sener, Carsten, Janiak, Christoph, Mohr, Fabian

Journal:

New Journal of Chemistry

Year:

2020

File:

PDF, 2.32 MB

2020

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