Tannier, Éric: search on Z-Library

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1

Palaeogenomics of plants: synteny-based modelling of extinct ancestors

Michael Abrouk, Florent Murat, Caroline Pont, Joachim Messing, Scott Jackson, Thomas Faraut, Eric Tannier, Christophe Plomion, Richard Cooke, Catherine Feuillet, Jérôme Salse

Journal:

Trends in Plant Science

Year:

2010

Language:

english

File:

PDF, 1.06 MB

english, 2010

2

INEX Tweet Contextualization task: Evaluation, results and lesson learned

Bellot, Patrice, Moriceau, Véronique, Mothe, Josiane, SanJuan, Eric, Tannier, Xavier

Journal:

Information Processing & Management

Year:

2016

Language:

english

File:

PDF, 942 KB

english, 2016

3

Gene transfers can date the tree of life

Davín, Adrián A., Tannier, Eric, Williams, Tom A., Boussau, Bastien, Daubin, Vincent, Szöllősi, Gergely J.

Journal:

Nature Ecology & Evolution

Year:

2018

Language:

english

File:

PDF, 1.79 MB

english, 2018

4

Advances on sorting by reversals

Eric Tannier, Anne Bergeron, Marie-France Sagot

Journal:

Discrete Applied Mathematics

Year:

2007

Language:

english

File:

PDF, 169 KB

english, 2007

5

On a modular domination game

Sylvain Gravier, Mehdi Mhalla, Eric Tannier

Journal:

Theoretical Computer Science

Year:

2003

Language:

english

File:

PDF, 314 KB

english, 2003

6

Approximating the number of Double Cut-and-Join scenarios

István Miklós, Eric Tannier

Journal:

Theoretical Computer Science

Year:

2012

Language:

english

File:

PDF, 270 KB

english, 2012

7

Multichromosomal median and halving problems under different genomic distances

Eric Tannier, Chunfang Zheng, David Sankoff

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 1.10 MB

english, 2009

8

Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests

Sophie S Abby, Eric Tannier, Manolo Gouy, Vincent Daubin

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 809 KB

english, 2010

9

Precise detection of rearrangement breakpoints in mammalian chromosomes

Claire Lemaitre, Eric Tannier, Christian Gautier, Marie-France Sagot

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 427 KB

english, 2008

10

Analysis of fine-scale mammalian evolutionary breakpoints provides new insight into their relation to genome organisation

Claire Lemaitre, Lamia Zaghloul, Marie-France Sagot, Christian Gautier, Alain Arneodo, Eric Tannier, Benjamin Audit

Journal:

Year:

2009

Language:

english

File:

PDF, 382 KB

english, 2009

11

[Computational Biology] Models and Algorithms for Genome Evolution Volume 19 ||

Chauve, Cedric, El-Mabrouk, Nadia, Tannier, Eric

Year:

2013

Language:

english

File:

PDF, 6.77 MB

english, 2013

12

Lateral gene transfer, rearrangement, reconciliation

Patterson, Murray, Szöllősi, Gergely, Daubin, Vincent, Tannier, Eric

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 637 KB

english, 2013

13

Gene tree correction guided by orthology

Manuel Lafond,Magali Semeria,Krister M Swenson,Eric Tannier…

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 582 KB

english, 2013

14

On Metric Generators of Graphs

Sebő, András, Tannier, Eric

Journal:

Mathematics of Operations Research

Year:

2004

Language:

english

File:

PDF, 232 KB

english, 2004

15

Counting and sampling SCJ small parsimony solutions

Miklós, István, Kiss, Sándor Z., Tannier, Eric

Journal:

Theoretical Computer Science

Year:

2014

Language:

english

File:

PDF, 491 KB

english, 2014

16

Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods II

Chauve, Cedric, Gavranovic, Haris, Ouangraoua, Aida, Tannier, Eric

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 2.24 MB

english, 2010

17

Computation of Perfect DCJ Rearrangement Scenarios with Linear and Circular Chromosomes

Bérard, Sèverine, Chateau, Annie, Chauve, Cedric, Paul, Christophe, Tannier, Eric

Journal:

Journal of Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

18

[Lecture Notes in Computer Science] Comparative Genomics Volume 6398 ||

Year:

2010

Language:

english

File:

PDF, 6.11 MB

english, 2010

19

[Computational Biology] Models and Algorithms for Genome Evolution Volume 19 || The Genesis of the DCJ Formula

Chauve, Cedric, El-Mabrouk, Nadia, Tannier, Eric

Year:

2013

Language:

english

File:

PDF, 1.01 MB

english, 2013

20

Genome-scale phylogenetic analysis finds extensive gene transfer among fungi

Szöllősi, Gergely J., Davín, Adrián Arellano, Tannier, Eric, Daubin, Vincent, Boussau, Bastien

Journal:

Philosophical Transactions Biological Sciences

Year:

2015

Language:

english

File:

PDF, 656 KB

english, 2015

21

Combinatorics of Genome Rearrangements || Genomes as Permutations

Fertin, Guillaume, Labarre, Anthony, Rusu, Irena, Tannier, Eric, Vialette, Stéphane

Year:

2009

Language:

english

File:

PDF, 242 KB

english, 2009

22

Breaking Good: Accounting for Fragility of Genomic Regions in Rearrangement Distance Estimation

Biller, Priscila, Guéguen, Laurent, Knibbe, Carole, Tannier, Eric

Journal:

Genome Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

23

On Metric Generators of Graphs

András Sebő and Eric Tannier

Journal:

Mathematics of Operations Research

Year:

2004

Language:

english

File:

PDF, 1.43 MB

english, 2004

24

Genome rearrangements with indels in intergenes restrict the scenario space

Bulteau, Laurent, Fertin, Guillaume, Tannier, Eric

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 520 KB

english, 2016

25

DeCoSTAR: Reconstructing the ancestral organization of genes or genomes using reconciled phylogenies

Duchemin, Wandrille, Anselmetti, Yoann, Patterson, Murray, Ponty, Yann, Berard, Severine, Chauve, Cedric, Scornavacca, Celine, Daubin, Vincent, Tannier, Eric

Journal:

Genome Biology and Evolution

Year:

2017

Language:

english

File:

PDF, 526 KB

english, 2017

26

Foundations of Coding (Compression, Encryption, Error Correction) || Error Detection and Correction

Dumas, Jean-Guillaume, ROCH, Jean-Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 780 KB

english, 2015

27

Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses

Jacox, Edwin, Weller, Mathias, Tannier, Eric, Scornavacca, Celine

Journal:

Year:

2017

Language:

english

File:

PDF, 367 KB

english, 2017

28

Ancestral gene synteny reconstruction improves extant species scaffolding

Yoann Anselmetti,Vincent Berry,Cedric Chauve,Annie Chateau,Eric Tannier…

Journal:

Year:

2015

Language:

english

File:

PDF, 1.85 MB

english, 2015

29

Reconstruction of an ancestralYersinia pestisgenome and comparison with an ancient sequence

Wandrille Duchemin,Vincent Daubin,Eric Tannier

Journal:

Year:

2015

Language:

english

File:

PDF, 1.52 MB

english, 2015

30

Algorithms for computing the double cut and join distance on both gene order and intergenic sizes

Guillaume Fertin,Géraldine Jean,Eric Tannier

Journal:

Algorithms for Molecular Biology

Year:

2017

Language:

english

File:

PDF, 1.98 MB

english, 2017

31

Moments of genome evolution by Double Cut-and-Join

Priscila Biller,Laurent Guéguen,Eric Tannier

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 1.13 MB

english, 2015

32

Probabilistic modeling of the evolution of gene synteny within reconciled phylogenies

Magali Semeria,Eric Tannier,Laurent Guéguen

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 963 KB

english, 2015

33

Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes

Anselmetti, Yoann, Duchemin, Wandrille, Tannier, Eric, Chauve, Cedric, Bérard, Sèverine

Journal:

Year:

2018

Language:

english

File:

PDF, 578 KB

english, 2018

34

Gene tree species tree reconciliation with gene conversion

Hasić, Damir, Tannier, Eric

Journal:

Journal of Mathematical Biology

Year:

2019

Language:

english

File:

PDF, 821 KB

english, 2019

35

Foundations of Coding (Compression, Encryption, Error Correction) || Compression, Encryption, Correction: As a Conclusion

Dumas, Jean-Guillaume, ROCH, Jean-Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 124 KB

english, 2015

36

Gene tree reconciliation including transfers with replacement is NP-hard and FPT

Hasić, Damir, Tannier, Eric

Journal:

Journal of Combinatorial Optimization

Year:

2019

Language:

english

File:

PDF, 1.34 MB

english, 2019

37

Zombi: A phylogenetic simulator of trees, genomes and sequences that accounts for dead linages

Davín, Adrián A, Tricou, Théo, Tannier, Eric, de Vienne, Damien M, Szöllősi, Gergely J, Schwartz, Russell

Journal:

Year:

2019

Language:

english

File:

PDF, 318 KB

english, 2019

38

Zombi: A phylogenetic simulator of trees, genomes and sequences that accounts for dead linages

Davín, Adrián A, Tricou, Théo, Tannier, Eric, de Vienne, Damien M, Szöllősi, Gergely J, Schwartz, Russell

Journal:

Year:

2019

File:

PDF, 318 KB

2019

39

Foundations of Coding (Compression, Encryption, Error Correction) ||

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 4.21 MB

english, 2015

40

Foundations of Coding (Compression, Encryption, Error Correction) || Problem Solutions

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 392 KB

english, 2015

41

Foundations of Coding (Compression, Encryption, Error Correction) || Foundations of Coding

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 859 KB

english, 2015

42

Foundations of Coding (Compression, Encryption, Error Correction) || Index

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 80 KB

english, 2015

43

Foundations of Coding (Compression, Encryption, Error Correction) || Bibliography

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 53 KB

english, 2015

44

Foundations of Coding (Compression, Encryption, Error Correction) || Front Matter

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 124 KB

english, 2015

45

Foundations of Coding (Compression, Encryption, Error Correction) || Introduction

Dumas, Jean‐Guillaume, ROCH, Jean‐Louis, Tannier, Éric, Varrette, Sébastien

Year:

2015

Language:

english

File:

PDF, 102 KB

english, 2015

46

Treerecs: an integrated phylogenetic tool, from sequences to reconciliations

Comte, Nicolas, Morel, Benoit, Hasic, Damir, GuÃ©guen, Laurent, Boussau, Bastien, Daubin, Vincent, Penel, Simon, Scornavacca, Celine, Gouy, Manolo, Stamatakis, Alexandros, Tannier, Eric, Parsons, Davi

Journal:

Year:

2020

File:

PDF, 183 KB

2020