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1

Meeting report – INDEPTH kick-off meeting

Parry, Geraint, Probst, Aline V., Baroux, Célia, Tatout, Christophe

Journal:

Journal of Cell Science

Year:

2018

Language:

english

File:

PDF, 1.27 MB

english, 2018

2

SINE Insertions as Clade Markers for Wild Crucifer Species

Tatout, C., Warwick, S., Lenoir, A., Deragon, J-M

Journal:

Molecular Biology and Evolution

Year:

1999

Language:

english

File:

PDF, 184 KB

english, 1999

3

Rapid evaluation in Escherichia coli of antisense RNAs and ribozymes

C. Tatout, E. Gauthier, H. Pinon

Journal:

Letters in Applied Microbiology

Year:

1998

Language:

english

File:

PDF, 235 KB

english, 1998

4

Similar Target Site Selection Occurs in Integration of Plant and Mammalian Retroposons

Christophe Tatout, Laurence Lavie, Jean-Marc Deragon

Journal:

Journal of Molecular Evolution

Year:

1998

Language:

english

File:

PDF, 243 KB

english, 1998

5

P-element transposition inDrosophila melanogaster: influence of size and arrangement in pairs

M. Delattre, C. Tatout, D. Coen

Journal:

Molecular Genetics and Genomics

Year:

2000

Language:

english

File:

PDF, 164 KB

english, 2000

6

S1 SINE retroposons are methylated at symmetrical and non- symmetrical positions in Brassica napus: identification of a preferred target site for asymmetrical methylation

Chantal Goubely, Philippe Arnaud, Christophe Tatout, J.S. Heslop-Harrison, Jean-Marc Deragon

Journal:

Plant Molecular Biology

Year:

1999

Language:

english

File:

PDF, 146 KB

english, 1999

7

Target sites for SINE integration inBrassicagenomes display nuclear matrix binding activity

A. P. Tikhonov, L. Lavie, C. Tatout, J. L. Bennetzen, Z. Avramova, J.-M. Deragon

Journal:

Chromosome Research

Year:

2001

Language:

english

File:

PDF, 167 KB

english, 2001

8

Utilization of the IR hybrid dysgenesis system in Drosophila to test in vivo mobilization of synthetic SINEs sharing 3′ homology with the I factor

Thierry Pélissier, Christophe Tatout, Jean-Marc Lavige, Isabelle Busseau, Alain Bucheton, Jean-Marc Deragon

Journal:

Year:

2002

Language:

english

File:

PDF, 298 KB

english, 2002

9

Controlling and addressing a retrotransposon in the Drosophila egg chamber

Docouier, Mylène, Gauthier, Emmanuel, Tatout, Christophe, Pinon, Hubert

Journal:

Biology of the Cell

Year:

1995

Language:

english

File:

PDF, 166 KB

english, 1995

10

The plant LINC complex at the nuclear envelope

Tatout, Christophe, Evans, David E., Vanrobays, Emmanuel, Probst, Aline V., Graumann, Katja

Journal:

Chromosome Research

Year:

2014

Language:

english

File:

PDF, 4.01 MB

english, 2014

11

Two Cytosolic Glutamine Synthetase Isoforms of Maize Are Specifically Involved in the Control of Grain Production

Martin, A., Lee, J., Kichey, T., Gerentes, D., Zivy, M., Tatout, C., Dubois, F., Balliau, T., Valot, B., Davanture, M., Terce-Laforgue, T., Quillere, I., Coque, M., Gallais, A., Gonzalez-Moro, M.-B.,

Journal:

Year:

2006

Language:

english

File:

PDF, 2.46 MB

english, 2006

12

Characterization of two distinct subfamilies of SUN-domain proteins in Arabidopsis and their interactions with the novel KASH-domain protein AtTIK

Graumann, K., Vanrobays, E., Tutois, S., Probst, A. V., Evans, D. E., Tatout, C.

Journal:

Journal of Experimental Botany

Year:

2014

Language:

english

File:

PDF, 1.84 MB

english, 2014

13

The histone chaperone complex HIR maintains nucleosome occupancy and counterbalances impaired histone deposition in CAF-1 complex mutants

Duc, Céline, Benoit, Matthias, Le Goff, Samuel, Simon, Lauriane, Poulet, Axel, Cotterell, Sylviane, Tatout, Christophe, Probst, Aline V.

Journal:

The Plant Journal

Year:

2015

Language:

english

File:

PDF, 713 KB

english, 2015

14

Evolutionary history of Methyltransferase 1 genes in hexaploid wheat

Thomas, Mélanie, Pingault, Lise, Poulet, Axel, Duarte, Jorge, Throude, Mickaël, Faure, Sébastien, Pichon, Jean-Philippe, Paux, Etienne, Probst, Aline, Tatout, Christophe

Journal:

Year:

2014

Language:

english

File:

PDF, 981 KB

english, 2014

15

empty pericarp4 Encodes a Mitochondrion-Targeted Pentatricopeptide Repeat Protein Necessary for Seed Development and Plant Growth in Maize

Gutierrez-Marcos, J. F., Dal Pra, M., Giulini, A., Costa, L. M., Gavazzi, G., Cordelier, S., Sellam, O., Tatout, C., Paul, W., Perez, P., Dickinson, H. G., Consonni, G.

Journal:

Year:

2007

Language:

english

File:

PDF, 1.88 MB

english, 2007

16

Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize: effects on lignification, fibre development, and global gene expression

Tamasloukht, B., Wong Quai Lam, M. S.-J., Martinez, Y., Tozo, K., Barbier, O., Jourda, C., Jauneau, A., Borderies, G., Balzergue, S., Renou, J.-P., Huguet, S., Martinant, J. P., Tatout, C., Lapierre,

Journal:

Journal of Experimental Botany

Year:

2011

Language:

english

File:

PDF, 775 KB

english, 2011

17

Structure of a Polycomb Response Element and In Vitro Binding of Polycomb Group Complexes Containing GAGA Factor

Horard, B., Tatout, C., Poux, S., Pirrotta, V.

Journal:

Molecular and Cellular Biology

Year:

2000

Language:

english

File:

PDF, 1.74 MB

english, 2000

18

Marker gene tethering by nucleoporins affects gene expression in plants

Smith, Sarah, Galinha, Carla, Desset, Sophie, Tolmie, Frances, Evans, David, Tatout, Christophe, Graumann, Katja

Journal:

Nucleus (Landes Bioscience)

Year:

2015

Language:

english

File:

PDF, 2.61 MB

english, 2015

19

Two Cytosolic Glutamine Synthetase Isoforms of Maize Are Specifically Involved in the Control of Grain Production

Antoine Martin, Judy Lee, Thomas Kichey, Denise Gerentes, Michel Zivy, Christophe Tatout, Frédéric Dubois, Thierry Balliau, Benoît Valot, Marlène Davanture, Thérèse Tercé-Laforgue, Isabelle Quilleré,

Journal:

Year:

2006

Language:

english

File:

PDF, 5.59 MB

english, 2006

20

UDP-glucose dehydrogenases of maize: a role in cell wall pentose biosynthesis

Kärkönen, Anna, Murigneux, Alain, Martinant, Jean-Pierre, Pepey, Elodie, Tatout, Christophe, Dudley, Bernard J., Fry, Stephen C.

Journal:

Biochemical Journal

Year:

2005

Language:

english

File:

PDF, 719 KB

english, 2005

21

A novel family of plant nuclear envelope-associated proteins

Pawar, Vidya, Poulet, Axel, Détourné, Gwénaëlle, Tatout, Christophe, Vanrobays, Emmanuel, Evans, David E, Graumann, Katja

Journal:

Journal of Experimental Botany

Year:

2016

Language:

english

File:

PDF, 1.20 MB

english, 2016

22

The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants

Poulet, Axel, Duc, Céline, Voisin, Maxime, Desset, Sophie, Tutois, Sylvie, Vanrobays, Emmanuel, Benoit, Matthias, Evans, David E., Probst, Aline V., Tatout, Christophe

Journal:

Journal of Cell Science

Year:

2017

Language:

english

File:

PDF, 5.76 MB

english, 2017

23

Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression

Duc, Céline, Benoit, Matthias, Détourné, Gwénaëlle, SIMON, Lauriane, Poulet, Axel, Jung, Matthieu, Veluchamy, Alaguraj, Latrasse, David, Le Goff, Samuel, Cotterell, Sylviane, Tatout, Christophe, Benha

Journal:

Year:

2017

Language:

english

File:

PDF, 3.67 MB

english, 2017

24

The interest of surgical closure of patent foramen ovale after stroke: A preliminary open study of 8 cases

Giroud, M., Tatout, E., Steinmetzt, E., Lemesle, M., Cottint, Y., Wolft, J.E., Moreau, Th., Davidt, M.

Journal:

Neurological Research

Year:

1998

Language:

english

File:

PDF, 7.03 MB

english, 1998

25

Spatial organization of chromosome territories in the interphase nucleus of trisomy 21 cells

Kemeny, Stephan, Tatout, Christophe, Salaun, Gaelle, Pebrel-Richard, Céline, Goumy, Carole, Ollier, Natasha, Maurin, Eugenie, Pereira, Bruno, Vago, Philippe, Gouas, Laetitia

Journal:

Year:

2017

Language:

english

File:

PDF, 2.05 MB

english, 2017

26

Genetic and epigenetic variation in 5S ribosomal RNA genes reveals genome dynamics in Arabidopsis thaliana

Simon, Lauriane, Rabanal, Fernando A, Dubos, Tristan, Oliver, Cecilia, Lauber, Damien, Poulet, Axel, Vogt, Alexander, Mandlbauer, Ariane, Le Goff, Samuel, Sommer, Andreas, Duborjal, Hervé, Tatout, Chr

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 1.81 MB

english, 2018

27

Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana

Simon, Lauriane, Voisin, Maxime, Tatout, Christophe, Probst, Aline V.

Journal:

Frontiers in Plant Science

Year:

2015

Language:

english

File:

PDF, 508 KB

english, 2015

28

Probing the 3D architecture of the plant nucleus with microscopy approaches: challenges and solutions

Dumur, Tao, Duncan, Susan, Graumann, Katja, Desset, Sophie, Randall, Ricardo S, Scheid, Ortrun Mittelsten, Prodanov, Dimiter, Tatout, Christophe, Baroux, Célia

Journal:

Nucleus (Landes Bioscience)

Year:

2019

Language:

english

File:

PDF, 6.78 MB

english, 2019

29

The H3 histone chaperone NASP SIM3 escorts CenH3 in Arabidopsis

Le Goff, Samuel, Keçeli, Burcu Nur, Jeřábková, Hana, Heckmann, Stefan, Rutten, Twan, Cotterell, Sylviane, Schubert, Veit, Roitinger, Elisabeth, Mechtler, Karl, Franklin, F. Christopher H., Tatout, Chr

Journal:

The Plant Journal

Year:

2019

Language:

english

File:

PDF, 5.90 MB

english, 2019

30

The H3 histone chaperone NASP SIM3 escorts CenH3 in Arabidopsis

Le Goff, Samuel, Keçeli, Burcu Nur, Jeřábková, Hana, Heckmann, Stefan, Rutten, Twan, Cotterell, Sylviane, Schubert, Veit, Roitinger, Elisabeth, Mechtler, Karl, Franklin, F. Christopher H., Tatout, Chr

Journal:

The Plant Journal

Year:

2019

File:

PDF, 5.90 MB

2019

31

Mathematical Modelling of Ground Truth Image for 3D Microscopic Objects Using Cascade of Convolutional Neural Networks Optimized with Parametersâ Combinations Generators

Bilalovic, Omar, Avdagic, Zikrija, Omanovic, Samir, Besic, Ingmar, Letic, Vedad, Tatout, Christophe

Journal:

Year:

2020

File:

PDF, 15.70 MB

2020

32

Untangling chromatin interactions

Parry, Geraint, Pradillo, MÃ³nica, Probst, Aline V, Tatout, Christophe

Journal:

Journal of Experimental Botany

Year:

2020

File:

PDF, 1.13 MB

2020

33

Automated 3D bio-imaging analysis of nuclear organization by NucleusJ 2.0

Dubos, Tristan, Poulet, Axel, Gonthier-Gueret, CÃ©line, Mougeot, Guillaume, Vanrobays, Emmanuel, Li, Yanru, Tutois, Sylvie, Pery, Emilie, Chausse, FrÃ©dÃ©ric, Probst, Aline V., Tatout, Christophe, Des

Journal:

Nucleus (Landes Bioscience)

Year:

2020

File:

PDF, 4.40 MB

2020