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1

Constant pH Molecular Dynamics (CpHMD) and mutation studies: Insights into AaegOBP1 pH-induced ligand releasing mechanism

Wen-Ting Chu, Yun-Jian Wu, Ji-Long Zhang, Qing-Chuan Zheng, Lin Chen, Qiao Xue, Hong-Xing Zhang

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2012

Language:

english

File:

PDF, 1011 KB

english, 2012

2

Constant pH molecular dynamics (CpHMD) and molecular docking studies of CquiOBP1 pH-induced ligand releasing mechanism

Wen-Ting Chu, Ji-Long Zhang, Qing-Chuan Zheng, Lin Chen…

Journal:

Journal of Molecular Modeling

Year:

2013

Language:

english

File:

PDF, 572 KB

english, 2013

3

Molecular dynamics (MD) simulations and binding free energy calculation studies between inhibitors and type II dehydroquinase (DHQ2)

Chu, Wen-Ting, Zheng, Qing-Chuan, Wu, Yun-Jian, Zhang, Ji-Long, Liang, Chong-Yang, Chen, Lin, Xue, Qiao, Zhang, Hong-Xing

Journal:

Molecular Simulation

Year:

2013

Language:

english

File:

PDF, 517 KB

english, 2013

4

A Novel Method for Enhancing Goos–Hänchen Shift in Total Internal Reflection

Zhi-Wei, Zhang, Ting-Dun, Wen, Ji-Long, Zhang

Journal:

Chinese Physics Letters

Year:

2009

Language:

english

File:

PDF, 3.48 MB

english, 2009

5

Effect of External Electric Field on Substrate Transport of a Secondary Active Transporter

Zhang, Ji-Long, Zheng, Qing-Chuan, Yu, Li-Ying, Li, Zheng-Qiang, Zhang, Hong-Xing

Journal:

Journal of Chemical Information and Modeling

Year:

2016

Language:

english

File:

PDF, 2.06 MB

english, 2016

6

Entire Solutions of Certain Type of Non-Linear Difference Equations

Chen, Min-Feng, Gao, Zong-Sheng, Zhang, Ji-Long

Journal:

Computational Methods and Function Theory

Year:

2018

Language:

english

File:

PDF, 501 KB

english, 2018

7

Identification of Gene Expression Changes Associated With Uterine Receptivity in Mice

He, Jia-Peng, Zhao, Miao, Zhang, Wen-Qian, Huang, Ming-Yu, Zhu, Can, Cheng, Hao-Zhuang, Liu, Ji-Long

Journal:

Frontiers in Physiology

Year:

2019

Language:

english

File:

PDF, 2.91 MB

english, 2019

8

The proline synthesis enzyme P5CS forms cytoophidia in Drosophila

Zhang, Bo, Tastan, ÃmÃ¼r Y., Zhou, Xian, Guo, Chen-Jun, Liu, Xuyang, Thind, Aaron, Hu, Huan-Huan, Zhao, Suwen, Liu, Ji-Long

Journal:

Journal of Genetics and Genomics

Year:

2020

Language:

english

File:

PDF, 16.61 MB

english, 2020

9

ChemInform Abstract: 4-(N-Hydroxyethyl-N-methylamino)benzaldehyde Thiosemicarbazone.

S. Shanmuga Sundara Raj, Hoong-Kun Fun, Xuan-Jun Zhang, Yu-Peng Tian, Fu-Xin Xie, Ji-Long Ma

Journal:

Year:

2001

File:

PDF, 28 KB

2001

10

Design of Multivalent Galactoside Ligands and Their Binding to Hepatic Asialoglycoprotein Receptor

Xiao-Ru Zhang, Ji-Long Jia, Rong-Jun Zhang, Min-Hua Xu, Shu-Sheng Zhang

Journal:

Chinese Journal of Chemistry

Year:

2006

Language:

english

File:

PDF, 62 KB

english, 2006

11

A power of an entire function sharing one value with its derivative

Ji-Long Zhang, Lian-Zhong Yang

Journal:

Computers & Mathematics with Applications

Year:

2010

Language:

english

File:

PDF, 289 KB

english, 2010

12

Theoretical improvement of the specific inhibitor of human carbonic anhydrase VII

Ji-Long Zhang, Qing-Chuan Zheng, Hong-Xing Zhang

Journal:

Computational Biology and Chemistry

Year:

2011

Language:

english

File:

PDF, 588 KB

english, 2011

13

Theoretical study on the mechanism of rearrangement reaction catalyzed by N5-carboxyaminoimidazole ribonucleotide mutase

Xue Li, Qing-Chuan Zheng, Ji-Long Zhang, Hong-Xing Zhang

Journal:

Computational and Theoretical Chemistry

Year:

2011

Language:

english

File:

PDF, 977 KB

english, 2011

14

Unbinding of glucose from human pulmonary surfactant protein D studied by steered molecular dynamics simulations

Ji-long Zhang, Qing-chuan Zheng, Hong-xing Zhang

Journal:

Chemical Physics Letters

Year:

2010

Language:

english

File:

PDF, 1.08 MB

english, 2010

15

Non-existence of meromorphic solutions of a Fermat type functional equation

Lian-Zhong Yang, Ji-Long Zhang

Journal:

Aequationes Mathematicae

Year:

2008

Language:

english

File:

PDF, 162 KB

english, 2008

16

Corrigendum to “Non-existence of meromorphic solutions of a Fermat type functional equation”, Aequationes Math. 76, 1/2 (2008), 140–150

Lian-Zhong Yang, Ji-Long Zhang

Journal:

Aequationes Mathematicae

Year:

2009

Language:

english

File:

PDF, 63 KB

english, 2009

17

Nicotinic acetylcholine receptor alpha7 subunit is time-dependently expressed in distinct cell types during skin wound healing in mice

Yan-Yan Fan, Tian-Shui Yu, Tao Wang, Wei-Wei Liu, Rui Zhao, Shu-Tao Zhang, Wen-Xiang Ma, Ji-Long Zheng, Da-Wei Guan

Journal:

Histochemistry and Cell Biology

Year:

2011

Language:

english

File:

PDF, 932 KB

english, 2011

18

DFT investigation on the reaction mechanism catalyzed by α-phosphomannomutase1 in protonated/deprotonated states

Hui-Ying Chu, Qing-Chuan Zheng, Xue Li, Yong-Shan Zhao, Ji-Long Zhang, Hong-Xing Zhang

Journal:

Journal of Molecular Modeling

Year:

2011

Language:

english

File:

PDF, 717 KB

english, 2011

19

Analysis of clinically relevant substrates of CYP2B6 enzyme by computational methods

Rui-Juan Niu, Qing-Chuan Zheng, Ji-Long Zhang, Hong-Xing Zhang

Journal:

Journal of Molecular Modeling

Year:

2011

Language:

english

File:

PDF, 408 KB

english, 2011

20

Studies on the age determination of trace plutonium

Yan Chen, Zhi-yuan Chang, Yong-gang Zhao, Ji-long Zhang, Jing-huai Li, Fu-jun Shu

Journal:

Journal of Radioanalytical and Nuclear Chemistry

Year:

2009

Language:

english

File:

PDF, 161 KB

english, 2009

21

Application of signaling protein 14-3-3 and 26 kDa glutathione-S-transferase to serological diagnosis of Schistosomiasis japonica

Qing-Li Luo, Zeng-Pei Qiao, Yin-Di Zhou, Xiao-Yue Li, Zheng-Rong Zhong, Yi-Jing Yu, Shi-Hai Zhang, Miao Liu, Mei-Juan Zheng, Mao-Hong Bian, Ji-Long Shen

Journal:

Year:

2009

Language:

english

File:

PDF, 378 KB

english, 2009

22

Experimental study and thermodynamic assessment of the Al–Fe rich side of the Al–Zn–Fe system at 300 and 550 ° C

Qun Luo, Ji-Long Chen, Yang Li, Fan Yang, Qian Li, Yue Wu, Jie-Yu Zhang, Kuo-Chih Chou

Journal:

Year:

2012

Language:

english

File:

PDF, 1.44 MB

english, 2012

23

Insights into the drug resistance induced by the BaDHPS mutations: molecular dynamic simulations and MM/GBSA studies

Chu, Wen-Ting, Zhang, Ji-Long, Zheng, Qing-Chuan, Chen, Lin, Xue, Qiao, Zhang, Hong-Xing

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2013

Language:

english

File:

PDF, 1.64 MB

english, 2013

24

Structural and Dynamic Basis of Human Cytochrome P450 7B1: A Survey of Substrate Selectivity and Major Active Site Access Channels

Cui, Ying-Lu, Zhang, Ji-Long, Zheng, Qing-Chuan, Niu, Rui-Juan, Xu, Yu, Zhang, Hong-Xing, Sun, Chia-Chung

Journal:

Chemistry - A European Journal

Year:

2013

Language:

english

File:

PDF, 1.94 MB

english, 2013

25

Glutamine analogs promote cytoophidium assembly in human and Drosophila cells

Kangni Chen, Jing Zhang, Ömür Yilmaz Tastan, Zillah Anne Deussen, Mayte Yu-Yin Siswick, Ji-Long Liu

Journal:

Journal of Genetics and Genomics

Year:

2011

Language:

english

File:

PDF, 3.93 MB

english, 2011

26

Influence of C-terminal tail deletion on structure and stability of hyperthermophile Sulfolobus tokodaii RNase HI

Chen, Lin, Zhang, Ji-Long, Zheng, Qing-Chuan, Chu, Wen-Ting, Xue, Qiao, Zhang, Hong-Xing, Sun, Chia-Chung

Journal:

Journal of Molecular Modeling

Year:

2013

Language:

english

File:

PDF, 1.31 MB

english, 2013

27

3-Anhydro-6-hydroxy-ophiobolin A, a new sesterterpene inhibiting the growth of methicillin-resistant Staphylococcus aureus and inducing the cell death by apoptosis on K562, from the phytopathogenic fungus Bipolaris oryzae

Wang, Quan-Xin, Yang, Jian-Ling, Qi, Qiu-Yue, Bao, Li, Yang, Xiao-Li, Liu, Miao-Miao, Huang, Pei, Zhang, Li-Xin, Chen, Ji-Long, Cai, Lei, Liu, Hong-Wei

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2013

Language:

english

File:

PDF, 971 KB

english, 2013

28

Influence of Hyperthermophilic Protein Cren7 on the Stability and Conformation of DNA: Insights from Molecular Dynamics Simulation and Free Energy Analysis

Chen, Lin, Zhang, Ji-Long, Yu, Li-Ying, Zheng, Qing-Chuan, Chu, Wen-Ting, Xue, Qiao, Zhang, Hong-Xing, Sun, Chia-Chung

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 4.50 MB

english, 2012

29

Natural velvet antler polypeptide conformation prediction and molecular docking study with TGF-β1 complex

Yu-Dong Shang, Ji-Long Zhang, Qing-Chuan Zheng

Journal:

Journal of Molecular Modeling

Year:

2013

Language:

english

File:

PDF, 737 KB

english, 2013

30

Molecular dynamics simulations studies and free energy analysis on inhibitors of MDM2–p53 interaction

Niu, Rui-Juan, Zheng, Qing-Chuan, Zhang, Ji-Long, Zhang, Hong-Xing

Journal:

Journal of Molecular Graphics and Modelling

Year:

2013

Language:

english

File:

PDF, 2.53 MB

english, 2013

31

Molecular Dynamic Investigations of the Mutational Effects on Structural Characteristics and Tunnel Geometry in CYP17A1

Cui, Ying-Lu, Zheng, Qing-Chuan, Zhang, Ji-Long, Xue, Qiao, Wang, Yan, Zhang, Hong-Xing

Journal:

Journal of Chemical Information and Modeling

Year:

2013

Language:

english

File:

PDF, 3.66 MB

english, 2013

32

Insights into the thermal stabilization and conformational transitions of DNA by hyperthermophile protein Sso7d: molecular dynamics simulations and MM-PBSA analysis

Chen, Lin, Zheng, Qing-Chuan, Yu, Li-Ying, Chu, Wen-Ting, Zhang, Ji-Long, Xue, Qiao, Zhang, Hong-Xing, Sun, Chia-Chung

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2012

Language:

english

File:

PDF, 517 KB

english, 2012

33

Mutation and low pH effect on the stability as well as unfolding kinetics of transthyretin dimer

Xue, Qiao, Zheng, Qing-Chuan, Zhang, Ji-Long, Cui, Ying-Lu, Chu, Wen-Ting, Zhang, Hong-Xing

Journal:

Biophysical Chemistry

Year:

2014

Language:

english

File:

PDF, 2.12 MB

english, 2014

34

Modification of Mg2Si in Mg-Si alloys with neodymium

HU, Ji-long, TANG, Chang-ping, ZHANG, Xin-ming, DENG, Yun-lai

Journal:

Transactions of Nonferrous Metals Society of China

Year:

2013

Language:

english

File:

PDF, 5.43 MB

english, 2013

35

Books Received

Pan, Chen, Wang, Qi, Liu, Ya-Peng, Xu, Li-Fang, Li, Yan-Fang, Hu, Jin-Xia, Jiang, Min, Zhang, Jin-Peng, Zhang, Mei-Rong, Yu, Hong-Min, Zhou, Ji-Long, Zhou, Xiao-Long, Xu, Li-Chun

Journal:

Journal of Vascular Surgery

Year:

2000

Language:

english

File:

PDF, 88 KB

english, 2000

36

Anti-androgen effects of the pyrethroid pesticide cypermethrin on interactions of androgen receptor with corepressors

Pan, Chen, Wang, Qi, Liu, Ya-Peng, Xu, Li-Fang, Li, Yan-Fang, Hu, Jin-Xia, Jiang, Min, Zhang, Jin-Peng, Zhang, Mei-Rong, Yu, Hong-Min, Zhou, Ji-Long, Zhou, Xiao-Long, Xu, Li-Chun

Journal:

Year:

2013

Language:

english

File:

PDF, 978 KB

english, 2013

37

Effects of Aluminum Trichloride on Structure and Function of Kidney in Chickens

Ji-hong, Zhang, Ji-long, Luo, Hong-xiang, Yu, Chong-sheng, Bai, Yan-fei, Han, Shi-liang, Xia, Yan-fei, Li

Journal:

Journal of Northeast Agricultural University (English Edition)

Year:

2012

Language:

english

File:

PDF, 987 KB

english, 2012

38

Molecular simulation investigation on the interaction between barrier-to-autointegration factor or its Gly25Glu mutant and DNA

Shang, Yu-Dong, Zhang, Ji-Long, Zhang, Hong-Xing, Zheng, Qing-Chuan

Journal:

Journal of Molecular Modeling

Year:

2014

Language:

english

File:

PDF, 1.80 MB

english, 2014

39

Highlighting a π–π interaction: a protein modeling and molecular dynamics simulation study onAnopheles gambiaeglutathione S-transferase 1-2

Wang, Yan, Zheng, Qing-Chuan, Zhang, Ji-Long, Cui, Ying-Lu, Xue, Qiao, Zhang, Hong-Xing

Journal:

Journal of Molecular Modeling

Year:

2013

Language:

english

File:

PDF, 760 KB

english, 2013

40

Molecular basis of the recognition of arachidonic acid by cytochrome P450 2E1 along major access tunnel

Cui, Ying-Lu, Zheng, Qing-Chuan, Zhang, Ji-Long, Zhang, Hong-Xing

Journal:

Year:

2015

Language:

english

File:

PDF, 2.46 MB

english, 2015

41

Exploring the Molecular Basis of dsRNA Recognition by Mss116p Using Molecular Dynamics Simulations and Free-Energy Calculations

Xue, Qiao, Zhang, Ji-Long, Zheng, Qing-Chuan, Cui, Ying-Lu, Chen, Lin, Chu, Wen-Ting, Zhang, Hong-Xing

Journal:

Year:

2013

Language:

english

File:

PDF, 4.77 MB

english, 2013

42

CATALYTIC MECHANISM OF ALL- TRANS -RETINOIC ACID 4-HYDROXYLATION MEDIATED BY CYTOCHROME P450 2C8: HOW DOES ARGININE 241 AFFECT THE C–H BOND ACTIVATION?

LI, XIAO-XI, ZHANG, JI-LONG, ZHENG, QING-CHUAN, CUI, YING-LU, NIU, RUI-JUAN, ZHANG, HONG-XING, SUN, CHIA-CHUNG

Journal:

Journal of Theoretical and Computational Chemistry

Year:

2013

Language:

english

File:

PDF, 703 KB

english, 2013

43

Electrochemically reduced graphene oxide and its capacitance performance

Zhang, Shu-bo, Yan, Yu-tao, Huo, Yu-qiu, Yang, Yang, Feng, Ji-long, Chen, Yu-feng

Journal:

Materials Chemistry and Physics

Year:

2014

Language:

english

File:

PDF, 1.20 MB

english, 2014

44

Synthesis of oxazolidinofullerenes/thiazolidinofullerenes: novel reaction of [60]fullerene with isocyanates/isothiocyanates promoted by ferric perchlorate

Li, Fa-Bao, Zhu, Ye-Fei, Zhang, Xiao-Feng, Shi, Ji-Long, Wu, Jun, Chen, Liu, Liang, Xiao-Xue, Liu, Li

Journal:

Year:

2014

Language:

english

File:

PDF, 1.25 MB

english, 2014

45

[IEEE 2012 2nd International Conference on Remote Sensing, Environment and Transportation Engineering (RSETE) - Nanjing, Jiangsu, China (2012.06.1-2012.06.3)] 2012 2nd International Conference on Remote Sensing, Environment and Transportation Engineering - A New Strategy for Wind Speed Forecasting Based on Autoregression and Wavelet Transform

Tong, Ji-Long, Zhao, Zeng-Bao, Zhang, Wen-Yu

Year:

2012

Language:

english

File:

PDF, 583 KB

english, 2012

46

[IEEE 2005 IEEE International Symposium on Microwave, Antenna, Propagation and EMC Technologies for Wireless Communications - Beijing, China (08-12 Aug. 2005)] 2005 IEEE International Symposium on Microwave, Antenna, Propagation and EMC Technologies for Wireless Communications - A Centralized Power Allocation Algorithm for TDD CDMA System with Smart Antenna in a Multi-cellular Environment

Ji-long Li,, Xiao-guang Wu,, Bing Wang,, Gang Deng,, Ping Zhang,

Year:

2005

Language:

english

File:

PDF, 731 KB

english, 2005

47

NRAV, a Long Noncoding RNA, Modulates Antiviral Responses through Suppression of Interferon-Stimulated Gene Transcription

Ouyang, Jing, Zhu, Xiaomei, Chen, Yuhai, Wei, Haitao, Chen, Qinghuang, Chi, Xiaojuan, Qi, Baomin, Zhang, Lianfeng, Zhao, Yi, Gao, George Fu, Wang, Guoshun, Chen, Ji-Long

Journal:

Cell Host & Microbe

Year:

2014

Language:

english

File:

PDF, 2.53 MB

english, 2014

48

Molecular dynamics simulation of the processive endocellulase Cel48F from Clostridium cellulolyticum : a novel “water-control mechanism” in enzymatic hydrolysis of cellulose

Zhang, Hao, Zhang, Ji-long, Sun, Lu, Niu, Xiao-di, Wang, Song, Shan, Ya-ming

Journal:

Journal of Molecular Recognition

Year:

2014

Language:

english

File:

PDF, 1.70 MB

english, 2014

49

Exploring the mechanism how Marburg virus VP35 recognizes and binds dsRNA by molecular dynamics simulations and free energy calculations

Xue, Qiao, Zheng, Qing-Chuan, Zhang, Ji-Long, Cui, Ying-Lu, Zhang, Hong-Xing, McCammon, J. Andrew

Journal:

Year:

2014

Language:

english

File:

PDF, 1.07 MB

english, 2014

50

[IEEE 2005 IEEE International Symposium on Microwave, Antenna, Propagation and EMC Technologies for Wireless Communications - Beijing, China (08-12 Aug. 2005)] 2005 IEEE International Symposium on Microwave, Antenna, Propagation and EMC Technologies for Wireless Communications - Joint multiuser detection and beamforming with power control in synchronous CDMA system

Ji-long Li,, Xiao-guang Wu,, Bing Wang,, Gang Deng,, Ping Zhang,

Year:

2005

Language:

english

File:

PDF, 660 KB

english, 2005