Volume 194; Issue 8

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Journal of Bacteriology
Volume 194; Issue 8

Journal of Bacteriology

Volume 194; Issue 8

1

Effect of Periodontal Pathogens on the Metatranscriptome of a Healthy Multispecies Biofilm Model

Frias-Lopez, J., Duran-Pinedo, A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.06 MB

english, 2012

2

Genome Sequence of "Candidatus Nitrosoarchaeum limnia" BG20, a Low-Salinity Ammonia-Oxidizing Archaeon from the San Francisco Bay Estuary

Mosier, A. C., Allen, E. E., Kim, M., Ferriera, S., Francis, C. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 155 KB

english, 2012

3

Second-Site Suppression of RNase E Essentiality by Mutation of the deaD RNA Helicase in Escherichia coli

Tamura, M., Kers, J. A., Cohen, S. N.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 2.32 MB

english, 2012

4

Biochemical Characterization of the CDP-D-Arabinitol Biosynthetic Pathway in Streptococcus pneumoniae 17F

Wang, Q., Xu, Y., Perepelov, A. V., Knirel, Y. A., Reeves, P. R., Shashkov, A. S., Guo, X., Ding, P., Feng, L.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 699 KB

english, 2012

5

Genome Sequence of "Candidatus Nitrosopumilus salaria" BD31, an Ammonia-Oxidizing Archaeon from the San Francisco Bay Estuary

Mosier, A. C., Allen, E. E., Kim, M., Ferriera, S., Francis, C. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 90 KB

english, 2012

6

Anaerobic p-Coumarate Degradation by Rhodopseudomonas palustris and Identification of CouR, a MarR Repressor Protein That Binds p-Coumaroyl Coenzyme A

Hirakawa, H., Schaefer, A. L., Greenberg, E. P., Harwood, C. S.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 955 KB

english, 2012

7

Novel, Highly Specific N-Demethylases Enable Bacteria To Live on Caffeine and Related Purine Alkaloids

Summers, R. M., Louie, T. M., Yu, C.-L., Gakhar, L., Louie, K. C., Subramanian, M.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 735 KB

english, 2012

8

Complete Genome Sequence of the African Dairy Isolate Streptococcus infantarius subsp. infantarius Strain CJ18

Jans, C., Follador, R., Lacroix, C., Meile, L., Stevens, M. J. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 92 KB

english, 2012

9

Genome-Wide Definition of the SigF Regulon in Mycobacterium tuberculosis

Hartkoorn, R. C., Sala, C., Uplekar, S., Busso, P., Rougemont, J., Cole, S. T.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.22 MB

english, 2012

10

Characterization of PomA Mutants Defective in the Functional Assembly of the Na+-Driven Flagellar Motor in Vibrio alginolyticus

Takekawa, N., Li, N., Kojima, S., Homma, M.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 836 KB

english, 2012

11

Identification of the cglC, cglD, cglE, and cglF Genes and Their Role in Cell Contact-Dependent Gliding Motility in Myxococcus xanthus

Pathak, D. T., Wall, D.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.05 MB

english, 2012

12

Draft Genome Sequence of the Nontoxigenic Clostridium difficile Strain CD37

Brouwer, M. S. M., Allan, E., Mullany, P., Roberts, A. P.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 94 KB

english, 2012

13

Genome Sequence of Janthinobacterium sp. Strain PAMC 25724, Isolated from Alpine Glacier Cryoconite

Kim, S. J., Shin, S. C., Hong, S. G., Lee, Y. M., Lee, H., Lee, J., Choi, I.-G., Park, H.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 83 KB

english, 2012

14

CovR Alleviates Transcriptional Silencing by a Nucleoid-Associated Histone-Like Protein in Streptococcus mutans

Biswas, I., Mohapatra, S. S.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 2.08 MB

english, 2012

15

Biological Roles of Nontypeable Haemophilus influenzae Type IV Pilus Proteins Encoded by the pil and com Operons

Carruthers, M. D., Tracy, E. N., Dickson, A. C., Ganser, K. B., Munson, R. S., Bakaletz, L. O.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.20 MB

english, 2012

16

Genome Sequence of Extracellular-Protease-Producing Alishewanella jeotgali Isolated from Traditional Korean Fermented Seafood

Jung, J., Chun, J., Park, W.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 86 KB

english, 2012

17

Heterogeneity in Pseudomonas aeruginosa Biofilms Includes Expression of Ribosome Hibernation Factors in the Antibiotic-Tolerant Subpopulation and Hypoxia-Induced Stress Response in the Metabolically Active Population

Williamson, K. S., Richards, L. A., Perez-Osorio, A. C., Pitts, B., McInnerney, K., Stewart, P. S., Franklin, M. J.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.45 MB

english, 2012

18

Genome Sequence of Lactobacillus fructivorans KCTC 3543

Nam, S.-H., Choi, S.-H., Kang, A., Lee, K. S., Kim, D.-W., Kim, R. N., Kim, D.-S., Park, H.-S.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 87 KB

english, 2012

19

Genome Sequence of the Halophilic Archaeon Halococcus hamelinensis

Burns, B. P., Gudhka, R. K., Neilan, B. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 89 KB

english, 2012

20

Hfq Regulates Biofilm Gut Blockage That Facilitates Flea-Borne Transmission of Yersinia pestis

Rempe, K. A., Hinz, A. K., Vadyvaloo, V.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.06 MB

english, 2012

21

ExpR Is Not Required for Swarming but Promotes Sliding in Sinorhizobium meliloti

Nogales, J., Bernabeu-Roda, L., Cuellar, V., Soto, M. J.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.19 MB

english, 2012

22

The TonB3 System in the Human Pathogen Vibrio vulnificus Is under the Control of the Global Regulators Lrp and Cyclic AMP Receptor Protein

Alice, A. F., Crosa, J. H.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 2.27 MB

english, 2012

23

Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhi P-stx-12

Ong, S. Y., Pratap, C. B., Wan, X., Hou, S., Abdul Rahman, A. Y., Saito, J. A., Nath, G., Alam, M.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 86 KB

english, 2012

24

Transcriptional and Posttranscriptional Events Control Copper-Responsive Expression of a Rhodobacter capsulatus Multicopper Oxidase

Rademacher, C., Moser, R., Lackmann, J.-W., Klinkert, B., Narberhaus, F., Masepohl, B.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 2.06 MB

english, 2012

25

Complete Genome Sequence of Rahnella sp. Strain Y9602, a Gammaproteobacterium Isolate from Metal- and Radionuclide-Contaminated Soil

Martinez, R. J., Bruce, D., Detter, C., Goodwin, L. A., Han, J., Han, C. S., Held, B., Land, M. L., Mikhailova, N., Nolan, M., Pennacchio, L., Pitluck, S., Tapia, R., Woyke, T., Sobecky, P. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 86 KB

english, 2012

26

Genome Sequence of Staphylococcus aureus VC40, a Vancomycin- and Daptomycin-Resistant Strain, To Study the Genetics of Development of Resistance to Currently Applied Last-Resort Antibiotics

Sass, P., Berscheid, A., Jansen, A., Oedenkoven, M., Szekat, C., Strittmatter, A., Gottschalk, G., Bierbaum, G.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 90 KB

english, 2012

27

Role of a SpoVA Protein in Dipicolinic Acid Uptake into Developing Spores of Bacillus subtilis

Li, Y., Davis, A., Korza, G., Zhang, P., Li, Y.-q., Setlow, B., Setlow, P., Hao, B.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.71 MB

english, 2012

28

Transcriptional Response of the Sulfur Chemolithoautotroph Thiomicrospira crunogena to Dissolved Inorganic Carbon Limitation

Dobrinski, K. P., Enkemann, S. A., Yoder, S. J., Haller, E., Scott, K. M.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.36 MB

english, 2012

29

Genome Sequence of the Human- and Animal-Pathogenic Strain Nocardia cyriacigeorgica GUH-2

Zoropogui, A., Pujic, P., Normand, P., Barbe, V., Beaman, B., Beaman, L., Boiron, P., Colinon, C., Deredjian, A., Graindorge, A., Mangenot, S., Nazaret, S., Neto, M., Petit, S., Roche, D., Vallenet, D

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 93 KB

english, 2012

30

Complete Genome Sequence of Lactococcus lactis IO-1, a Lactic Acid Bacterium That Utilizes Xylose and Produces High Levels of L-Lactic Acid

Kato, H., Shiwa, Y., Oshima, K., Machii, M., Araya-Kojima, T., Zendo, T., Shimizu-Kadota, M., Hattori, M., Sonomoto, K., Yoshikawa, H.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 93 KB

english, 2012

31

Spontaneous Excision of the O-Polysaccharide wbkA Glycosyltranferase Gene Is a Cause of Dissociation of Smooth to Rough Brucella Colonies

Mancilla, M., Marin, C. M., Blasco, J. M., Zarraga, A. M., Lopez-Goni, I., Moriyon, I.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 747 KB

english, 2012

32

Complete Genome Sequence of Oceanimonas sp. GK1, a Halotolerant Bacterium from Gavkhouni Wetland in Iran

Parsa Yeganeh, L., Azarbaijani, R., Sarikhan, S., Mousavi, H., Ramezani, M., Amoozegar, M. A., Shahzadeh Fazeli, A., Hosseini Salekdeh, G.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 92 KB

english, 2012

33

Transcriptional Organization and Physiological Contributions of the relQ Operon of Streptococcus mutans

Kim, J. N., Ahn, S.-J., Seaton, K., Garrett, S., Burne, R. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.68 MB

english, 2012

34

Draft Genome Sequence of the Shrimp Pathogen Vibrio harveyi CAIM 1792

Espinoza-Valles, I., Soto-Rodriguez, S., Edwards, R. A., Wang, Z., Vora, G. J., Gomez-Gil, B.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 86 KB

english, 2012

35

Novel Colicin FY of Yersinia frederiksenii Inhibits Pathogenic Yersinia Strains via YiuR-Mediated Reception, TonB Import, and Cell Membrane Pore Formation

Bosak, J., Laiblova, P., Smarda, J., Dedicova, D., Smajs, D.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 661 KB

english, 2012

36

Genomic Rearrangements Leading to Overexpression of Aldo-Keto Reductase YafB of Escherichia coli Confer Resistance to Glyoxal

Kwon, M., Lee, J., Lee, C., Park, C.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.73 MB

english, 2012

37

The Yersinia pestis Rcs Phosphorelay Inhibits Biofilm Formation by Repressing Transcription of the Diguanylate Cyclase Gene hmsT

Sun, Y.-C., Guo, X.-P., Hinnebusch, B. J., Darby, C.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 638 KB

english, 2012

38

The PduM Protein Is a Structural Component of the Microcompartments Involved in Coenzyme B12-Dependent 1,2-Propanediol Degradation by Salmonella enterica

Sinha, S., Cheng, S., Fan, C., Bobik, T. A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.29 MB

english, 2012

39

The Early Divisome Protein FtsA Interacts Directly through Its 1c Subdomain with the Cytoplasmic Domain of the Late Divisome Protein FtsN

Busiek, K. K., Eraso, J. M., Wang, Y., Margolin, W.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 1.67 MB

english, 2012

40

Genome Sequence of the Pattern-Forming Social Bacterium Paenibacillus dendritiformis C454 Chiral Morphotype

Sirota-Madi, A., Olender, T., Helman, Y., Brainis, I., Finkelshtein, A., Roth, D., Hagai, E., Leshkowitz, D., Brodsky, L., Galatenko, V., Nikolaev, V., Gutnick, D. L., Lancet, D., Ben-Jacob, E.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 91 KB

english, 2012

41

De Novo Genome Project of Cupriavidus basilensis OR16

Cserhati, M., Kriszt, B., Szoboszlay, S., Toth, A., Szabo, I., Tancsics, A., Nagy, I., Horvath, B., Nagy, I., Kukolya, J.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 93 KB

english, 2012

42

The Branched-Chain Amino Acid Aminotransferase Encoded by ilvE Is Involved in Acid Tolerance in Streptococcus mutans

Santiago, B., MacGilvray, M., Faustoferri, R. C., Quivey, R. G.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 2.24 MB

english, 2012

43

Escherichia coli Serotype O55:H7 Diversity Supports Parallel Acquisition of Bacteriophage at Shiga Toxin Phage Insertion Sites during Evolution of the O157:H7 Lineage

Kyle, J. L., Cummings, C. A., Parker, C. T., Quinones, B., Vatta, P., Newton, E., Huynh, S., Swimley, M., Degoricija, L., Barker, M., Fontanoz, S., Nguyen, K., Patel, R., Fang, R., Tebbs, R., Petrausk

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 11.79 MB

english, 2012

44

Genome Sequence of Paenibacillus sp. Strain Aloe-11, an Endophytic Bacterium with Broad Antimicrobial Activity and Intestinal Colonization Ability

Li, N.-Z., Xia, T., Xu, Y.-L., Qiu, R.-R., Xiang, H., He, D., Peng, Y.-Y.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 87 KB

english, 2012