Volume 52; Issue 10

Journal of Clinical Microbiology

Volume 52; Issue 10

1

Three Isothermal Amplification Techniques for Rapid Identification of Cladophialophora carrionii, an Agent of Human Chromoblastomycosis

Deng, S., de Hoog, G. S., Pan, W., Chen, M., van den Ende, A. H. G. G., Yang, L., Sun, J., Najafzadeh, M. J., Liao, W., Li, R.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 764 KB

english, 2014

2

Rapid Detection of Extended-Spectrum- -Lactamase-Producing Enterobacteriaceae from Urine Samples by Use of the ESBL NDP Test

Dortet, L., Poirel, L., Nordmann, P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 600 KB

english, 2014

3

Comparison of Two Commercial Real-Time PCR Assays for Detection of Dengue Virus in Patient Serum Samples

Saengsawang, J., Nathalang, O., Kamonsil, M., Watanaveeradej, V.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 347 KB

english, 2014

4

Comparative Evaluation of Three Commercial Systems for Detection of High-Risk Human Papillomavirus in Cervical and Vaginal ThinPrep PreservCyt Samples and Correlation with Biopsy Results

Binnicker, M. J., Pritt, B. S., Duresko, B. J., Espy, M. J., Grys, T. E., Zarka, M. A., Kerr, S. E., Henry, M. R.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 269 KB

english, 2014

5

To Add or Not To Add Polysorbate 80: Impact on Colistin MICs for Clinical Strains of Enterobacteriaceae and Pseudomonas aeruginosa and Quality Controls

Sutherland, C. A., Nicolau, D. P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 161 KB

english, 2014

6

Answer to October 2014 Photo Quiz

Farfour, E., Badell, E., Jacques Natali, L., Dommergues, M. A., Blot, S., Guiso, N., Pangon, B., Foucaud, P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 164 KB

english, 2014

7

Evaluation of 16S rRNA Gene PCR Sensitivity and Specificity for Diagnosis of Prosthetic Joint Infection: a Prospective Multicenter Cross-Sectional Study

Bemer, P., Plouzeau, C., Tande, D., Leger, J., Giraudeau, B., Valentin, A. S., Jolivet-Gougeon, A., Vincent, P., Corvec, S., Gibaud, S., Juvin, M. E., Hery-Arnaud, G., Lemarie, C., Kempf, M., Bret, L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 265 KB

english, 2014

8

Analysis of Culture-Dependent versus Culture-Independent Techniques for Identification of Bacteria in Clinically Obtained Bronchoalveolar Lavage Fluid

Dickson, R. P., Erb-Downward, J. R., Prescott, H. C., Martinez, F. J., Curtis, J. L., Lama, V. N., Huffnagle, G. B.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.09 MB

english, 2014

9

The -Lacta Test for Direct Detection of Extended-Spectrum- -Lactamase-Producing Enterobacteriaceae in Urine

Gallah, S., Decre, D., Genel, N., Arlet, G.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 378 KB

english, 2014

10

Detection of Respiratory Viruses in Sputum from Adults by Use of Automated Multiplex PCR

Branche, A. R., Walsh, E. E., Formica, M. A., Falsey, A. R.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 970 KB

english, 2014

11

PCR in Diagnosis of Invasive Aspergillosis: a Meta-Analysis of Diagnostic Performance

Arvanitis, M., Ziakas, P. D., Zacharioudakis, I. M., Zervou, F. N., Caliendo, A. M., Mylonakis, E.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 997 KB

english, 2014

12

Comparison of Amplicor and GeneXpert MTB/RIF Tests for Diagnosis of Tuberculous Meningitis

Patel, V. B., Connolly, C., Singh, R., Lenders, L., Matinyenya, B., Theron, G., Ndung'u, T., Dheda, K.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 571 KB

english, 2014

13

Amikacin Resistance in Staphylococcus pseudintermedius Isolated from Dogs

Gold, R. M., Cohen, N. D., Lawhon, S. D.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 293 KB

english, 2014

14

Collection and Characterization of Samples for Establishment of a Serum Repository for Lyme Disease Diagnostic Test Development and Evaluation

Molins, C. R., Sexton, C., Young, J. W., Ashton, L. V., Pappert, R., Beard, C. B., Schriefer, M. E.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 919 KB

english, 2014

15

Current Status of Epidemiology and Diagnosis of Human Sarcocystosis

Poulsen, C. S., Stensvold, C. R.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

16

Comparative Evaluation of Two Commercial Multiplex Panels for Detection of Gastrointestinal Pathogens by Use of Clinical Stool Specimens

Khare, R., Espy, M. J., Cebelinski, E., Boxrud, D., Sloan, L. M., Cunningham, S. A., Pritt, B. S., Patel, R., Binnicker, M. J.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 706 KB

english, 2014

17

Genetic Identification of Rickettsial Isolates from Fatal Cases of Brazilian Spotted Fever and Comparison with Rickettsia rickettsii Isolates from the American Continents

Labruna, M. B., Santos, F. C. P., Ogrzewalska, M., Nascimento, E. M. M., Colombo, S., Marcili, A., Angerami, R. N.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 573 KB

english, 2014

18

Performance of Two Resin-Containing Blood Culture Media in Detection of Bloodstream Infections and in Direct Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) Broth Assays for Isolate Identification: Clinical Comparison of the BacT/Alert Plus and Bactec Plus Systems

Fiori, B., D'Inzeo, T., Di Florio, V., De Maio, F., De Angelis, G., Giaquinto, A., Campana, L., Tanzarella, E., Tumbarello, M., Antonelli, M., Sanguinetti, M., Spanu, T.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.13 MB

english, 2014

19

Commutability of the Epstein-Barr Virus WHO International Standard across Two Quantitative PCR Methods

Abeynayake, J., Johnson, R., Libiran, P., Sahoo, M. K., Cao, H., Bowen, R., Chan, K. C. A., Le, Q.-T., Pinsky, B. A.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 426 KB

english, 2014

20

Poor Performance of the Determine HIV-1/2 Ag/Ab Combo Fourth-Generation Rapid Test for Detection of Acute Infections in a National Household Survey in Swaziland

Duong, Y. T., Mavengere, Y., Patel, H., Moore, C., Manjengwa, J., Sibandze, D., Rasberry, C., Mlambo, C., Li, Z., Emel, L., Bock, N., Moore, J., Nkambule, R., Justman, J., Reed, J., Bicego, G., Ellenb

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 372 KB

english, 2014

21

Whole-Genome Sequencing of the Mycobacterium tuberculosis Manila Sublineage Results in Less Clustering and Better Resolution than Mycobacterial Interspersed Repetitive-Unit-Variable-Number Tandem-Repeat (MIRU-VNTR) Typing and Spoligotyping

Jamieson, F. B., Teatero, S., Guthrie, J. L., Neemuchwala, A., Fittipaldi, N., Mehaffy, C.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 366 KB

english, 2014

22

Shiga Toxin-Producing Escherichia coli: a Single-Center, 11-Year Pediatric Experience

Schindler, E. I., Sellenriek, P., Storch, G. A., Tarr, P. I., Burnham, C.-A. D.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 773 KB

english, 2014

23

Endotracheal Aspirate and Bronchoalveolar Lavage Fluid Analysis: Interchangeable Diagnostic Modalities in Suspected Ventilator-Associated Pneumonia?

Scholte, J. B. J., van Dessel, H. A., Linssen, C. F. M., Bergmans, D. C. J. J., Savelkoul, P. H. M., Roekaerts, P. M. H. J., van Mook, W. N. K. A.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 492 KB

english, 2014

24

Integrating Forecast Probabilities in Antibiograms: a Way To Guide Antimicrobial Prescriptions More Reliably?

Maurer, F. P., Courvalin, P., Bottger, E. C., Hombach, M.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.12 MB

english, 2014

25

Molecular Typing of Treponema pallidum in the Czech Republic during 2011 to 2013: Increased Prevalence of Identified Genotypes and of Isolates with Macrolide Resistance

Grillova, L., Petro ova, H., Mikalova, L., Strnadel, R., Dastychova, E., Kuklova, I., Kojanova, M., Kreidlova, M., Va ousova, D., Hercogova, J., Prochazka, P., Zakoucka, H., Krch akova, A., Va k , V.,

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.11 MB

english, 2014

26

Evaluation of the Nanosphere Verigene BC-GN Assay for Direct Identification of Gram-Negative Bacilli and Antibiotic Resistance Markers from Positive Blood Cultures and Potential Impact for More-Rapid Antibiotic Interventions

Hill, J. T., Tran, K.-D. T., Barton, K. L., Labreche, M. J., Sharp, S. E.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 184 KB

english, 2014

27

Rapid Inactivation of Mycobacterium and Nocardia Species before Identification Using Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

Dunne, W. M., Doing, K., Miller, E., Miller, E., Moreno, E., Baghli, M., Mailler, S., Girard, V., van Belkum, A., Deol, P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.11 MB

english, 2014

28

Using Crude Whole-Genome Assemblies of Neisseria gonorrhoeae as a Platform for Strain Analysis: Clonal Spread of Gonorrhea Infection in Saskatchewan, Canada

Vidovic, S., Caron, C., Taheri, A., Thakur, S. D., Read, T. D., Kusalik, A., Dillon, J.-A. R.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 809 KB

english, 2014

29

Cryptic and Rare Aspergillus Species in Brazil: Prevalence in Clinical Samples and In Vitro Susceptibility to Triazoles

Negri, C. E., Goncalves, S. S., Xafranski, H., Bergamasco, M. D., Aquino, V. R., Castro, P. T. O., Colombo, A. L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.11 MB

english, 2014

30

Exploring the Potential of Next-Generation Sequencing in Detection of Respiratory Viruses

Prachayangprecha, S., Schapendonk, C. M. E., Koopmans, M. P., Osterhaus, A. D. M. E., Schurch, A. C., Pas, S. D., van der Eijk, A. A., Poovorawan, Y., Haagmans, B. L., Smits, S. L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 2.50 MB

english, 2014

31

Population Analysis of Streptococcus suis Isolates from Slaughtered Swine by Use of Minimum Core Genome Sequence Typing

Zheng, H., Ji, S., Lan, R., Liu, Z., Bai, X., Zhang, W., Gottschalk, M., Xu, J.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 230 KB

english, 2014

32

Molecular Epidemiology of the Pertussis Epidemic in Washington State in 2012

Bowden, K. E., Williams, M. M., Cassiday, P. K., Milton, A., Pawloski, L., Harrison, M., Martin, S. W., Meyer, S., Qin, X., DeBolt, C., Tasslimi, A., Syed, N., Sorrell, R., Tran, M., Hiatt, B., Tondel

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 987 KB

english, 2014

33

Molecular Phylogeny of Coxsackievirus A16

Sun, T., Liu, Y., Zhang, Y., Zhou, L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 728 KB

english, 2014

34

Genetic Relatedness versus Biological Compatibility between Aspergillus fumigatus and Related Species

Sugui, J. A., Peterson, S. W., Figat, A., Hansen, B., Samson, R. A., Mellado, E., Cuenca-Estrella, M., Kwon-Chung, K. J.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 4.60 MB

english, 2014

35

Use of the BacT/Alert System for Rapid Detection of Microbial Contamination in a Pilot Study Using Pancreatic Islet Cell Products

Murray, L., McGowan, N., Fleming, J., Bailey, L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 104 KB

english, 2014

36

Correction for Barker et al., Isolation and Identification of Kroppenstedtia eburnea Isolates from Multiple Patient Samples

Barker, A. P., Simmon, K. E., Cohen, S., Schuetz, A., Slechta, E. S., Fisher, M. A., Schlaberg, R.

Journal:

Journal of Clinical Microbiology

Year:

2014

File:

PDF, 62 KB

2014

37

Multi-Virulence-Locus Sequence Typing of Staphylococcus lugdunensis Generates Results Consistent with a Clonal Population Structure and Is Reliable for Epidemiological Typing

Didi, J., Lemee, L., Gibert, L., Pons, J.-L., Pestel-Caron, M.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 661 KB

english, 2014

38

Interspecies Transfer of blaIMP-4 in a Patient with Prolonged Colonization by IMP-4-Producing Enterobacteriaceae

Sidjabat, H. E., Heney, C., George, N. M., Nimmo, G. R., Paterson, D. L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 347 KB

english, 2014

39

Using Genomics To Standardize Population Analysis Profile-Area under the Curve Ratio for Vancomycin-Intermediate Staphylococcus aureus

Read, T. D., Satola, S. W.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 391 KB

english, 2014

40

Evaluation of Performance and Acceptability of Two Rapid Oral Fluid Tests for HIV Detection in Mozambique

Sema Baltazar, C., Raposo, C., Jani, I. V., Shodell, D., Correia, D., Goncalves da Silva, C., Kalou, M., Patel, H., Parekh, B.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 197 KB

english, 2014

41

Clinical Characteristics Associated with Mycoplasma genitalium among Female Sex Workers in Nairobi, Kenya

Gomih-Alakija, A., Ting, J., Mugo, N., Kwatampora, J., Getman, D., Chitwa, M., Patel, S., Gokhale, M., Kimani, J., Behets, F. S., Smith, J. S.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 175 KB

english, 2014

42

Two Cases of Bacteriemia Caused by Nontoxigenic, Non-O1, Non-O139 Vibrio cholerae Isolates in Ho Chi Minh City, Vietnam

Lan, N. P. H., Nga, T. V. T., Yen, N. T. T., Dung, L. T., Tuyen, H. T., Campbell, J. I., Whitehorn, J., Thwaites, G., Chau, N. V. V., Baker, S.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 356 KB

english, 2014

43

Clinical Validation of the Lyra Direct HSV 1+2/VZV Assay for Simultaneous Detection and Differentiation of Three Herpesviruses in Cutaneous and Mucocutaneous Lesions

Fan, F., Stiles, J., Mikhlina, A., Lu, X., Babady, N. E., Tang, Y.-W.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 116 KB

english, 2014

44

Photo Quiz: Multiple Skin Lesions on a 9-Year-Old Boy Returning from Mali

Farfour, E., Badell, E., Jacques Natali, L., Dommergues, M. A., Blot, S., Guiso, N., Pangon, B., Foucaud, P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 433 KB

english, 2014

45

Detection of Mycobacterium leprae by PCR Testing of Sputa from a Patient with Pulmonary Cryptococcus Coinfection in Northern Australia

Edwards, L. J., Price, R. N., Krause, V. L., Huffam, S. E., Globan, M., Fyfe, J., Hajkowicz, K. M.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 444 KB

english, 2014

46

Unusual Detection of an Acinetobacter Class D Carbapenemase Gene, blaOXA-23, in a Clinical Escherichia coli Isolate

La, M.-V., Jureen, R., Lin, R. T. P., Teo, J. W. P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 128 KB

english, 2014

47

Evaluation of Disk Potentiation Test Using Kirby-Bauer Disks Containing High-Dosage Fosfomycin and Glucose-6-Phosphate To Detect Production of Glutathione S-Transferase Responsible for Fosfomycin Resistance

Wachino, J.-i., Kimura, K., Yamada, K., Jin, W., Arakawa, Y.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 276 KB

english, 2014

48

False-Positive Results for Rapid Diagnostic Tests for Malaria in Patients with Rheumatoid Factor

Lee, J.-H., Jang, J. W., Cho, C. H., Kim, J. Y., Han, E. T., Yun, S. G., Lim, C. S.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 154 KB

english, 2014

49

Performance Comparison of the Versant HCV Genotype 2.0 Assay (LiPA) and the Abbott Realtime HCV Genotype II Assay for Detecting Hepatitis C Virus Genotype 6

Yang, R., Cong, X., Du, S., Fei, R., Rao, H., Wei, L.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.21 MB

english, 2014

50

Lumbar Discitis Caused by Clostridium perfringens

Lotte, R., Popoff, M. R., Degand, N., Lotte, L., Bouvet, P., Baudin, G., Cua, E., Roger, P.-M., Ruimy, R.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 300 KB

english, 2014

51

Editorial Board

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 63 KB

english, 2014

52

Mupirocin-Induced Mutations in ileS in Various Genetic Backgrounds of Methicillin-Resistant Staphylococcus aureus

Lee, A. S., Gizard, Y., Empel, J., Bonetti, E.-J., Harbarth, S., Francois, P.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 151 KB

english, 2014

53

Comparison of Flocked and Aptima Swabs and Two Specimen Transport Media in the Aptima Combo 2 Assay

Li, J., Jang, D., Gilchrist, J., Smieja, M., Ewert, R., MacRitchie, C., Chernesky, M.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 101 KB

english, 2014

54

Genome Sequencing of Mycobacterium abscessus Isolates from Patients in the United States and Comparisons to Globally Diverse Clinical Strains

Davidson, R. M., Hasan, N. A., Reynolds, P. R., Totten, S., Garcia, B., Levin, A., Ramamoorthy, P., Heifets, L., Daley, C. L., Strong, M.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.31 MB

english, 2014

55

Fatal Systemic Necrotizing Infections Associated with a Novel Paramyxovirus, Anaconda Paramyxovirus, in Green Anaconda Juveniles

Woo, P. C. Y., Lau, S. K. P., Martelli, P., Hui, S.-W., Lau, C. C. Y., Fan, R. Y. Y., Groff, J. M., Tam, E. W. T., Chan, K.-H., Yuen, K.-Y.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1022 KB

english, 2014

56

Evaluation of a Commercially Developed Semiautomated PCR-Surface-Enhanced Raman Scattering Assay for Diagnosis of Invasive Fungal Disease

White, P. L., Hibbitts, S. J., Perry, M. D., Green, J., Stirling, E., Woodford, L., McNay, G., Stevenson, R., Barnes, R. A.

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 775 KB

english, 2014

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