Volume 11; Issue 10

Journal of Proteome Research

Volume 11; Issue 10

1

Comprehensive Proteomic Analysis of Nonintegrin Laminin Receptor Interacting Proteins

Venticinque, Lisa, Meruelo, Daniel

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.88 MB

english, 2012

2

Quantitative Proteomics Reveal ATM Kinase-dependent Exchange in DNA Damage Response Complexes

Choi, Serah, Srivas, Rohith, Fu, Katherine Y., Hood, Brian L., Dost, Banu, Gibson, Gregory A., Watkins, Simon C., Van Houten, Bennett, Bandeira, Nuno, Conrads, Thomas P., Ideker, Trey, Bakkenist, Chri

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 7.38 MB

english, 2012

3

Involvement of Rab6 in the Regulation of Phagocytosis against Virus Infection in Invertebrates

Ye, Ting, Tang, Wen, Zhang, Xiaobo

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.17 MB

english, 2012

4

Conus consors Snail Venom Proteomics Proposes Functions, Pathways, and Novel Families Involved in Its Venomic System

Leonardi, Adrijana, Biass, Daniel, Kordiš, Dušan, Stöcklin, Reto, Favreau, Philippe, Križaj, Igor

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.26 MB

english, 2012

5

Metabolic Fingerprints of Serum, Brain, and Liver Are Distinct for Mice with Cerebral and Noncerebral Malaria: A 1 H NMR Spectroscopy-Based Metabonomic Study

Ghosh, Soumita, Sengupta, Arjun, Sharma, Shobhona, Sonawat, Haripalsingh M.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.42 MB

english, 2012

6

Rat Mammary Extracellular Matrix Composition and Response to Ibuprofen Treatment During Postpartum Involution by Differential GeLC–MS/MS Analysis

O’Brien, Jenean H., Vanderlinden, Lauren A., Schedin, Pepper J., Hansen, Kirk C.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 540 KB

english, 2012

7

Metabolomics View on Gut Microbiome Modulation by Polyphenol-rich Foods

Moco, Sofia, Martin, François-Pierre J., Rezzi, Serge

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 984 KB

english, 2012

8

Protein and Steroid Profiles in Follicular Fluid after Ovarian Hyperstimulation as Potential Biomarkers of IVF Outcome

Kushnir, Mark M, Naessén, Tord, Wanggren, Kjell, Rockwood, Alan L, Crockett, David K, Bergquist, Jonas

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 288 KB

english, 2012

9

Hepatitis B Virus Encoded X Protein Suppresses Apoptosis by Inhibition of the Caspase-Independent Pathway

Liu, Haiying, Yuan, Yanzhi, Guo, Hongyan, Mitchelson, Keith, Zhang, Ke, Xie, Lan, Qin, Wenyan, Lu, Ying, Wang, Jian, Guo, Yong, Zhou, Yuxiang, He, Fuchu

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.60 MB

english, 2012

10

Transcriptomic and Metabonomic Profiling Reveal Synergistic Effects of Quercetin and Resveratrol Supplementation in High Fat Diet Fed Mice

Zhou, Mingmei, Wang, Shidong, Zhao, Aihua, Wang, Ke, Fan, Ziquan, Yang, Hongzhou, Liao, Wen, Bao, Si, Zhao, Linjing, Zhang, Yinan, Yang, Yongqing, Qiu, Yunping, Xie, Guoxiang, Li, Houkai, Jia, Wei

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 659 KB

english, 2012

11

A Complex Standard for Protein Identification, Designed by Evolution

Vaudel, Marc, Burkhart, Julia M., Breiter, Daniela, Zahedi, René P., Sickmann, Albert, Martens, Lennart

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 300 KB

english, 2012

12

Identification of Proteins Associated with the Pseudomonas aeruginosa Biofilm Extracellular Matrix

Toyofuku, Masanori, Roschitzki, Bernd, Riedel, Katharina, Eberl, Leo

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.91 MB

english, 2012

13

Recent Insights into Plant–Virus Interactions through Proteomic Analysis

Di Carli, Mariasole, Benvenuto, Eugenio, Donini, Marcello

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 4.74 MB

english, 2012

14

Oxidative Stress Acts on Special Membrane Proteins To Reduce the Viability of Pseudomonas syringae pv tomato

Cao, Baohua, Liu, Jia, Qin, Guozheng, Tian, Shiping

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 3.95 MB

english, 2012

15

Determination of 15 N-Incorporation into Plant Proteins and their Absolute Quantitation: A New Tool to Study Nitrogen Flux Dynamics and Protein Pool Sizes Elicited by Plant–Herbivore Interactions

Ullmann-Zeunert, Lynn, Muck, Alexander, Wielsch, Natalie, Hufsky, Franziska, Stanton, Mariana A., Bartram, Stefan, Böcker, Sebastian, Baldwin, Ian T., Groten, Karin, Svatoš, Aleš

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.56 MB

english, 2012

16

Proteomic Classification of Acute Leukemias by Alignment-Based Quantitation of LC–MS/MS Data Sets

Foss, Eric J., Radulovic, Dragan, Stirewalt, Derek L., Radich, Jerald, Sala-Torra, Olga, Pogosova-Agadjanyan, Era L., Hengel, Shawna M., Loeb, Keith R., Deeg, H. Joachim, Meshinchi, Soheil, Goodlett,

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.11 MB

english, 2012

17

Mass Spectrometry (LC–MS/MS) Identified Proteomic Biosignatures of Breast Cancer in Proximal Fluid

Whelan, Stephen A., He, Jianbo, Lu, Ming, Souda, Puneet, Saxton, Romaine E., Faull, Kym F., Whitelegge, Julian P., Chang, Helena R.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 3.99 MB

english, 2012

18

Proteomics Strategy to Identify Substrates of LNX, a PDZ Domain-containing E3 Ubiquitin Ligase

Guo, Zhengguang, Song, Eli, Ma, Sucan, Wang, Xiaorong, Gao, Shijuan, Shao, Chen, Hu, Siqi, Jia, Lulu, Tian, Rui, Xu, Tao, Gao, Youhe

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.97 MB

english, 2012

19

Serum Metabolomics in a Helicobacter hepaticus Mouse Model of Inflammatory Bowel Disease Reveal Important Changes in the Microbiome, Serum Peptides, and Intermediary Metabolism

Lu, Kun, Knutson, Charles G., Wishnok, John S., Fox, James G., Tannenbaum, Steven R.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.99 MB

english, 2012

20

Integral Quantification Accuracy Estimation for Reporter Ion-based Quantitative Proteomics (iQuARI)

Vaudel, Marc, Burkhart, Julia M., Radau, Sonja, Zahedi, René P., Martens, Lennart, Sickmann, Albert

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.05 MB

english, 2012

21

Proteomic Analysis Reveals Drug Accessible Cell Surface N-Glycoproteins of Primary and Established Glioblastoma Cell Lines

Bock, Thomas, Moest, Hansjoerg, Omasits, Ulrich, Dolski, Silvia, Lundberg, Emma, Frei, Andreas, Hofmann, Andreas, Bausch-Fluck, Damaris, Jacobs, Andrea, Krayenbuehl, Niklaus, Uhlen, Mathias, Aebersold

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.81 MB

english, 2012

22

Cerebrospinal Fluid Proteome of Patients with Acute Lyme Disease

Angel, Thomas E., Jacobs, Jon M., Smith, Robert P., Pasternack, Mark S., Elias, Susan, Gritsenko, Marina A., Shukla, Anil, Gilmore, Edward C., McCarthy, Carol, Camp, David G., Smith, Richard D., Warre

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.66 MB

english, 2012

23

Cloud Parallel Processing of Tandem Mass Spectrometry Based Proteomics Data

Mohammed, Yassene, Mostovenko, Ekaterina, Henneman, Alex A., Marissen, Rob J., Deelder, André M., Palmblad, Magnus

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.79 MB

english, 2012

24

Glutathione S -Transferase (GST) M1, but Not GSTT1, Genotype Influences Plasma Proteomic Profiles in Caucasian and East Asian Young Adults

Fischer, Karina, Da Costa, Laura A., García-Bailo, Bibiana, Borchers, Christoph H., El-Sohemy, Ahmed

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 427 KB

english, 2012

25

Combination of Gas-Phase Fractionation and MS 3 Acquisition Modes for Relative Protein Quantification with Isobaric Tagging

Dayon, Loïc, Sonderegger, Bernhard, Kussmann, Martin

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.21 MB

english, 2012

26

Peptides Quantification by Liquid Chromatography with Matrix-Assisted Laser Desorption/Ionization and Selected Reaction Monitoring Detection

Lesur, Antoine, Varesio, Emmanuel, Domon, Bruno, Hopfgartner, Gérard

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.45 MB

english, 2012

27

Metabolomic Signatures in Guinea Pigs Infected with Epidemic-Associated W-Beijing Strains of Mycobacterium tuberculosis

Somashekar, Bagganahalli S., Amin, Anita G., Tripathi, Pratima, MacKinnon, Neil, Rithner, Christopher D., Shanley, Crystal A, Basaraba, Randall, Henao-Tamayo, Marcela, Kato-Maeda, Midori, Ramamoorthy,

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.78 MB

english, 2012

28

Sparc-Like Protein 1 Is a New Marker of Human Glioma Progression

Turtoi, Andrei, Musmeci, Davide, Naccarato, Antonio Giuseppe, Scatena, Cristian, Ortenzi, Valerio, Kiss, Robert, Murtas, Daniela, Patsos, Georgios, Mazzucchelli, Gabriel, De Pauw, Edwin, Bevilacqua, G

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.67 MB

english, 2012

29

Metabolomic Investigation of the Anti-Platelet Aggregation Activity of Ginsenoside Rk 1 Reveals Attenuated 12-HETE Production

Ju, Hyun Kyoung, Lee, Jin Gyun, Park, Mi Kyung, Park, So-Jung, Lee, Chang Hoon, Park, Jeong Hill, Kwon, Sung Won

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 3.68 MB

english, 2012

30

Online Nanoscale ERLIC-MS Outperforms RPLC–MS for Shotgun Proteomics in Complex Mixtures

de Jong, Ebbing P., Griffin, Timothy J.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.38 MB

english, 2012

31

Change of Carbon Source Causes Dramatic Effects in the Phospho-Proteome of the Archaeon Sulfolobus solfataricus

Esser, D., Pham, T. K., Reimann, J., Albers, S. V., Siebers, B., Wright, P. C.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 4.53 MB

english, 2012

32

Myelin Basic Protein Undergoes a Broader Range of Modifications in Mammals than in Lower Vertebrates

Zhang, Chunchao, Walker, Angela K., Zand, Robert, Moscarello, Mario A., Yan, Jerry Mingtao, Andrews, Philip C.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 4.62 MB

english, 2012

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