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Volume 4; Issue 2
Main
Journal of Proteome Research
Volume 4; Issue 2
Journal of Proteome Research
Volume 4; Issue 2
1
Proteomic Characterization of Rat Liver Exposed to 2,3,7,8-Tetrachlorobenzo- p -dioxin
Lee, Sung-Han
,
Lee, Do-Youn
,
Son, Won-Kyu
,
Joo, Won-A
,
Kim, Chan-Wha
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 535 KB
Your tags:
english, 2005
2
High Resolution “Ultra Performance” Liquid Chromatography Coupled to oa-TOF Mass Spectrometry as a Tool for Differential Metabolic Pathway Profiling in Functional Genomic Studies
Wilson, Ian D.
,
Nicholson, Jeremy K.
,
Castro-Perez, Jose
,
Granger, Jennifer H.
,
Johnson, Kelly A.
,
Smith, Brian W.
,
Plumb, Robert S.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 644 KB
Your tags:
english, 2005
3
A Proteomic Approach To Analyze Auxin- and Zinc-Responsive Protein in Rice
Yang, Guangxiao
,
Inoue, Akihiko
,
Takasaki, Hironori
,
Kaku, Hisatoshi
,
Akao, Shoichiro
,
Komatsu, Setsuko
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 792 KB
Your tags:
english, 2005
4
Analysis of Shotgun Proteomics and RNA Profiling Data from Arabidopsis t haliana Chloroplasts
Baginsky, Sacha
,
Kleffmann, Torsten
,
von Zychlinski, Anne
,
Gruissem, Wilhelm
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 157 KB
Your tags:
english, 2005
5
Search for Cancer Markers from Endometrial Tissues Using Differentially Labeled Tags iTRAQ and cICAT with Multidimensional Liquid Chromatography and Tandem Mass Spectrometry
DeSouza, Leroi
,
Diehl, Georg
,
Rodrigues, Mary Joe
,
Guo, Jingzhong
,
Romaschin, Alexander D.
,
Colgan, Terence J.
,
Siu, K. W. Michael
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 279 KB
Your tags:
english, 2005
6
Identification of Protein Modifications Using MS/MS de Novo Sequencing and the OpenSea Alignment Algorithm
Searle, Brian C.
,
Dasari, Surendra
,
Wilmarth, Phillip A.
,
Turner, Mark
,
Reddy, Ashok P.
,
David, Larry L.
,
Nagalla, Srinivasa R.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 543 KB
Your tags:
english, 2005
7
Cold Adaptation of the Antarctic Archaeon, Methanococcoides burtonii Assessed by Proteomics Using ICAT
Goodchild, Amber
,
Raftery, Mark
,
Saunders, Neil F. W.
,
Guilhaus, Michael
,
Cavicchioli, Ricardo
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 211 KB
Your tags:
english, 2005
8
Eliminating the Interferences from TRIS Buffer and SDS in Protein Analysis by Fused-Droplet Electrospray Ionization Mass Spectrometry
Shieh, I-Fan
,
Lee, Chi-Yang
,
Shiea, Jentaie
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 225 KB
Your tags:
english, 2005
9
Differential Detergent Fractionation for Non-electrophoretic Eukaryote Cell Proteomics
McCarthy, Fiona M.
,
Burgess, Shane C.
,
van den Berg, Bart H. J.
,
Koter, Marek D.
,
Pharr, G. Todd
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 446 KB
Your tags:
english, 2005
10
Simple Protein Complex Purification and Identification Method for High-Throughput Mapping of Protein Interaction Networks
Markillie, Lye Meng
,
Lin, Chiann-Tso
,
Adkins, Joshua N.
,
Auberry, Deanna L.
,
Hill, Eric A.
,
Hooker, Brian S.
,
Moore, Priscilla A.
,
Moore, Ronald J.
,
Shi, Liang
,
Wiley, H. Steven
,
Kery, Vladimir
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 276 KB
Your tags:
english, 2005
11
Prediction of Peptide Retention at Different HPLC Conditions from Multiple Linear Regression Models
Ba̧czek, Tomasz
,
Wiczling, Paweł
,
Marszałł, Michał
,
Heyden, Yvan Vander
,
Kaliszan, Roman
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 269 KB
Your tags:
english, 2005
12
Application of Isotope Coded Affinity Tag (ICAT) Analysis for the Identification of Differentially Expressed Proteins Following Infection of Atlantic Salmon ( Salmo s alar) with Infectious Hematopoietic Necrosis Virus (IHNV) or Renibacterium s almoninarum (BKD)
Booy, A. T.
,
Haddow, J. D.
,
Ohlund, L. B.
,
Hardie, D. B.
,
Olafson, R. W.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 241 KB
Your tags:
english, 2005
13
Phosphoproteomic Analysis of Synaptosomes from Human Cerebral Cortex
DeGiorgis, Joseph A.
,
Jaffe, Howard
,
Moreira, Jorge E.
,
Carlotti, Carlos G.
,
Leite, João P.
,
Pant, Harish C.
,
Dosemeci, Ayse
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 206 KB
Your tags:
english, 2005
14
Effect of Biofilm Model, Mode of Growth, and Strain on Streptococcus m utans Protein Expression as Determined by Two-Dimensional Difference Gel Electrophoresis
Luppens, Suzanne B. I.
,
ten Cate, Jacob M.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 260 KB
Your tags:
english, 2005
15
Assessing Data Quality of Peptide Mass Spectra Obtained by Quadrupole Ion Trap Mass Spectrometry
Xu, Ming
,
Geer, Lewis Y.
,
Bryant, Stephen H.
,
Roth, Jeri S.
,
Kowalak, Jeffrey A.
,
Maynard, Dawn M.
,
Markey, Sanford P.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 237 KB
Your tags:
english, 2005
16
Novel Approach for Peptide Quantitation and Sequencing Based on 15 N and 13 C Metabolic Labeling
Snijders, Ambrosius P. L.
,
de Vos, Marjon G. J.
,
Wright, Phillip C.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 285 KB
Your tags:
english, 2005
17
Let's Preserve Proper Terminology
Knapp, Daniel R.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 34 KB
Your tags:
english, 2005
18
Meeting News: NIH Standards in Proteomics Workshop
Cottingham, Katie
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 54 KB
Your tags:
english, 2005
19
Proteomic Profiling of Surface Proteins on Th1 and Th2 Cells
Loyet, Kelly M.
,
Ouyang, Wenjun
,
Eaton, Dan L.
,
Stults, John T.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 523 KB
Your tags:
english, 2005
20
Domain Graph of Arabidopsis Proteome by Comparative Analysis
Liu, Song
,
Zhang, Chi
,
Zhou, Yaoqi
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 751 KB
Your tags:
english, 2005
21
Proteome Analysis of Membrane and Cell Wall Associated Proteins from Staphylococcus aureus
Nandakumar, Renu
,
Nandakumar, M. P.
,
Marten, Mark R.
,
Ross, Julia M.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 310 KB
Your tags:
english, 2005
22
Metabolic Labeling of Human Primary Retinal Pigment Epithelial Cells for Accurate Comparative Proteomics
Hathout, Yetrib
,
Flippin, Jessica
,
Fan, Chenguang
,
Liu, Pinghu
,
Csaky, Karl
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 277 KB
Your tags:
english, 2005
23
Analysis of the Dorsal Spinal Cord Synaptic Architecture by Combined Proteome Analysis and in Situ Hybridization
Dreger, Mathias
,
Mika, Joanna
,
Bieller, Annette
,
Jahnel, Ricarda
,
Gillen, Clemens
,
Schaefer, Martin K. H.
,
Weihe, Eberhard
,
Hucho, Ferdinand
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 1.23 MB
Your tags:
english, 2005
24
Metabolomic analyses by MALDI-TOFMS | The dynamic nucleolar proteome | Protein interaction patterns | Glycoprotein biomarkers of liver cancer | STOCSY aids metabolite biomarker identification | New ICAT reagent | Finding phosphotyrosine | Protein biomarker for Alzheimer's | Dynamic yeast interactome | Drought-induced changes in beet proteome | Ubiquitination by MALDI-TOFMS/MS | E. coli interactome
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 116 KB
Your tags:
english, 2005
25
Genomic Messaging System Language Including Command Extensions for Clinical Data Categories
Robson, Barry
,
Mushlin, Richard
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 816 KB
Your tags:
english, 2005
26
Proteomic Analysis of Serum Cytokine Levels in Response to Highly Active Antiretroviral Therapy (HAART)
Relucio, Karen I.
,
Beernink, Hans T.
,
Chen, Donna
,
Israelski, Dennis M.
,
Kim, Raymond
,
Holodniy, Mark
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 220 KB
Your tags:
english, 2005
27
Complementary Structural Information from a Tryptic N -Linked Glycopeptide via Electron Transfer Ion/Ion Reactions and Collision-Induced Dissociation
Hogan, Jason M.
,
Pitteri, Sharon J.
,
Chrisman, Paul A.
,
McLuckey, Scott A.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 165 KB
Your tags:
english, 2005
28
Primordial Proteins and HIV
Sommer, Andrei P.
,
Pavláth, Attila E.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 75 KB
Your tags:
english, 2005
29
Trypsin-Based Monolithic Bioreactor Coupled On-Line with LC/MS/MS System for Protein Digestion and Variant Identification in Standard Solutions and Serum Samples
Calleri, Enrica
,
Temporini, Caterina
,
Perani, Eleonora
,
De Palma, Antonella
,
Lubda, Dieter
,
Mellerio, Giorgio
,
Sala, Alberto
,
Galliano, Monica
,
Caccialanza, Gabriele
,
Massolini, Gabriella
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 349 KB
Your tags:
english, 2005
30
Matrix Implanted Laser Desorption Ionization (MILDI) Combined with Ion Mobility-Mass Spectrometry for Bio-Surface Analysis
Tempez, A.
,
Ugarov, M.
,
Egan, T.
,
Schultz, J. A.
,
Novikov, A.
,
Della-Negra, S.
,
Lebeyec, Y.
,
Pautrat, M.
,
Caroff, M.
,
Smentkowski, V. S.
,
Wang, H-Y. J.
,
Jackson, S. N.
,
Woods, A. S.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 318 KB
Your tags:
english, 2005
31
Localization of an N-Domain Region of Angiotensin-Converting Enzyme Involved in the Regulation of Ectodomain Shedding Using Monoclonal Antibodies
Balyasnikova, Irina V.
,
Woodman, Zenda L.
,
Albrecht, Ronald F.
,
Natesh, Ramanathan
,
Acharya, K. Ravi
,
Sturrock, Edward D.
,
Danilov, Sergei M.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 589 KB
Your tags:
english, 2005
32
SCAPE: A New Tool for the Selective CApture of PEptides in Protein Identification
Betancourt, Lazaro
,
Gil, Jeovanis
,
Besada, Vladimir
,
González, Luis J.
,
Fernández-de-Cossio, Jorge
,
García, Liudy
,
Pajón, Rolando
,
Sanchez, Aniel
,
Alvarez, Félix
,
Padrón, Gabriel
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 161 KB
Your tags:
english, 2005
33
Toward a Common Proteomics Platform
Hancock, William S.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 46 KB
Your tags:
english, 2005
34
P-Mod: An Algorithm and Software To Map Modifications To Peptide Sequences Using Tandem MS Data
Hansen, Beau T.
,
Davey, Sean W.
,
Ham, Amy-Joan L.
,
Liebler, Daniel C.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 325 KB
Your tags:
english, 2005
35
Protein Identification in Complex Mixtures
Eriksson, Jan
,
Fenyö, David
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 203 KB
Your tags:
english, 2005
36
Proteolytic 18 O Labeling by Peptidyl-Lys Metalloendopeptidase for Comparative Proteomics
Rao, K. C. Sekhar
,
Carruth, Ryan T.
,
Miyagi, Masaru
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 368 KB
Your tags:
english, 2005
37
Genistein Reverses Changes of the Proteome Induced by Oxidized-LDL in EA·hy 926 Human Endothelial Cells
Fuchs, Dagmar
,
Erhard, Petra
,
Turner, Rufus
,
Rimbach, Gerald
,
Daniel, Hannelore
,
Wenzel, Uwe
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 474 KB
Your tags:
english, 2005
38
New Products
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 50 KB
Your tags:
english, 2005
39
Effect of High Density Lipoproteins on Protein Expression in Myoblast Cell Lines
Babic, Nikolina
,
Beeson, Craig
,
Dovichi, Norman J.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 658 KB
Your tags:
english, 2005
40
Human Plasma Proteome Analysis by Multidimensional Chromatography Prefractionation and Linear Ion Trap Mass Spectrometry Identification
Jin, Wen-Hai
,
Dai, Jie
,
Li, Su-Jun
,
Xia, Qi-Chang
,
Zou, Han-Fa
,
Zeng, Rong
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 260 KB
Your tags:
english, 2005
41
Clinical and Pharmacogenomic Data Mining: 3. Zeta Theory As a General Tactic for Clinical Bioinformatics
Robson, Barry
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 163 KB
Your tags:
english, 2005
42
Nanoliter Sample Handling Combined with Microspot MALDI−MS for Detection of Gel-Separated Phosphoproteins
Stupak, Jacek
,
Liu, Huaizhi
,
Wang, Zhengping
,
Brix, Brenda J.
,
Fliegel, Larry
,
Li, Liang
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 224 KB
Your tags:
english, 2005
43
Fluorescence Properties of Glutamine-Binding Protein from Escherichia c oli and Its Complex with Glutamine
Kuznetsova, Irina M.
,
Stepanenko, Olga V.
,
Turoverov, Konstantin K.
,
Staiano, Maria
,
Scognamiglio, Viviana
,
Rossi, Mose'
,
D'Auria, Sabato
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 289 KB
Your tags:
english, 2005
44
Proteome Analysis of Antiproliferative Mechanism of 12-O-Tetradecanoylphorbol 13-Acetate on Cultured Nasopharyngeal Carcinoma CNE2 Cells
Jiang, Peizhou
,
Gan, Ming
,
Huang, Hua
,
Shen, Xinming
,
Wang, Shuang
,
Yao, Kaitai
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 366 KB
Your tags:
english, 2005
45
Mapping Sites of Protein Phosphorylation by Mass Spectrometry Utilizing a Chemical-Enzymatic Approach: Characterization of Products from α-S1Casein Phosphopeptides
McCormick, Daniel J.
,
Holmes, Michael W.
,
Muddiman, David C.
,
Madden, Benjamin J.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 329 KB
Your tags:
english, 2005
46
Increased Levels of Ubiquitin in the 6-OHDA-Lesioned Striatum of Rats
Pierson, Johan
,
Svenningsson, Per
,
Caprioli, Richard M.
,
Andren, Per E.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 124 KB
Your tags:
english, 2005
47
Reproducibility of Tryptic Digestion Investigated by Quantitative Fourier Transform Ion Cyclotron Resonance Mass Spectrometry
Hagman, Charlotte
,
Ramström, Margareta
,
Jansson, Maria
,
James, Peter
,
Håkansson, Per
,
Bergquist, Jonas
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 189 KB
Your tags:
english, 2005
48
Quantitative Proteomic Analysis of the Secretory Proteins from Rat Adipose Cells Using a 2D Liquid Chromatography−MS/MS Approach
Chen, Xiaoli
,
Cushman, Samuel W.
,
Pannell, Lewis K.
,
Hess, Sonja
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 240 KB
Your tags:
english, 2005
49
Proteomic Analysis of Lipid Microdomains from Lipopolysaccharide-Activated Human Endothelial Cells
Karsan, Aly
,
Blonder, Josip
,
Law, Jennifer
,
Yaquian, Elisa
,
Lucas, David A.
,
Conrads, Thomas P.
,
Veenstra, Timothy
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 416 KB
Your tags:
english, 2005
50
Conversion of Human α-lactalbumin to an Apo-like State in the Complexes with Basic Poly-Amino Acids: Toward Understanding of the Molecular Mechanism of Antitumor Action of HAMLET
Permyakov, Serge E.
,
Pershikova, Irina V.
,
Zhadan, Andrei P.
,
Goers, John
,
Bakunts, Anush G.
,
Uversky, Vladimir N.
,
Berliner, Lawrence J.
,
Permyakov, Eugene A.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 157 KB
Your tags:
english, 2005
51
Identification of the Thrombin Light Chain A as the Single Best Mass for Differentiation of Gastric Cancer Patients from Individuals with Dyspepsia by Proteome Analysis
Ebert, Matthias P. A.
,
Lamer, Stephanie
,
Meuer, Jörn
,
Malfertheiner, Peter
,
Reymond, Marc
,
Buschmann, Thomas
,
Röcken, Christoph
,
Seibert, Volker
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 254 KB
Your tags:
english, 2005
52
Depletion of High-Abundant Proteins in Body Fluids Prior to Liquid Chromatography Fourier Transform Ion Cyclotron Resonance Mass Spectrometry
Ramström, Margareta
,
Hagman, Charlotte
,
Mitchell, Jennifer K.
,
Derrick, Peter J.
,
Håkansson, Per
,
Bergquist, Jonas
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 829 KB
Your tags:
english, 2005
53
Study of the Interaction of Chlorisondamine and Chlorisondamine Analogues with an Epitope of the α-2 Neuronal Acetylcholine Nicotinic Receptor Subunit
Taggi, Andrew E.
,
Meinwald, Jerrold
,
Wise, Roy A.
,
Woods, Amina S.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 312 KB
Your tags:
english, 2005
54
Research Profile: Proteomics data back up soy health claims
Erickson, Britt E.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 64 KB
Your tags:
english, 2005
55
Meetings
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 46 KB
Your tags:
english, 2005
56
Predicted Roles for Hypothetical Proteins in the Low-Temperature Expressed Proteome of the Antarctic Archaeon Methanococcoides b urtonii
Saunders, Neil F. W.
,
Goodchild, Amber
,
Raftery, Mark
,
Guilhaus, Michael
,
Curmi, Paul M. G.
,
Cavicchioli, Ricardo
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 174 KB
Your tags:
english, 2005
57
Proteomic Characterization of A Triton-Insoluble Fraction from Chloroplasts Defines A Novel Group of Proteins Associated with Macromolecular Structures
Phinney, Brett S.
,
Thelen, Jay J.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 344 KB
Your tags:
english, 2005
58
Quantitative Profiling of the Detergent-Resistant Membrane Proteome of Iota-b Toxin Induced Vero Cells
Blonder, Josip
,
Hale, Martha L.
,
Chan, King C.
,
Yu, Li-Rong
,
Lucas, David A.
,
Conrads, Thomas P.
,
Zhou, Ming
,
Popoff, Michel R.
,
Issaq, Haleem J.
,
Stiles, Bradley G.
,
Veenstra, Timothy D.
Journal:
Journal of Proteome Research
Year:
2005
Language:
english
File:
PDF, 294 KB
Your tags:
english, 2005
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