Volume 5; Issue 11

Journal of Proteome Research

Volume 5; Issue 11

1

New Developments in Profiling and Imaging of Proteins from Tissue Sections by MALDI Mass Spectrometry

Chaurand, Pierre, Norris, Jeremy L., Cornett, D. Shannon, Mobley, James A., Caprioli, Richard M.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 1.21 MB

english, 2006

2

Detecting Differential and Correlated Protein Expression in Label-Free Shotgun Proteomics

Zhang, Bing, VerBerkmoes, Nathan C., Langston, Michael A., Uberbacher, Edward, Hettich, Robert L., Samatova, Nagiza F.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 494 KB

english, 2006

3

Characterization of the Outer Membrane Protein Profile from Disease-Related Helicobacter p ylori Isolates by Subcellular Fractionation and Nano-LC FT-ICR MS Analysis

Carlsohn, Elisabet, Nyström, Johanna, Karlsson, Hasse, Svennerholm, Ann-Mari, Nilsson, Carol L.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 360 KB

english, 2006

4

Proteomic Analysis of Plasma Membrane from Hypoxia-Adapted Malignant Melanoma

Stockwin, Luke H., Blonder, Josip, Bumke, Maja A., Lucas, David A., Chan, King C., Conrads, Thomas P., Issaq, Haleem J., Veenstra, Timothy D., Newton, Dianne L., Rybak, Susanna M.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 488 KB

english, 2006

5

Biomarker Candidate Identification in Yersinia p estis Using Organism-Wide Semiquantitative Proteomics

Hixson, Kim K., Adkins, Joshua N., Baker, Scott E., Moore, Ronald J., Chromy, Brett A., Smith, Richard D., McCutchen-Maloney, Sandra L., Lipton, Mary S.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 557 KB

english, 2006

6

Allosteric Modulation of Dopamine D 2 Receptors by Homocysteine

Agnati, Luigi F., Ferré, Sergi, Genedani, Susanna, Leo, Giuseppina, Guidolin, Diego, Filaferro, Monica, Carriba, Paulina, Casadó, Vicent, Lluis, Carme, Franco, Rafael, Woods, Amina S., Fuxe, Kjell

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 204 KB

english, 2006

7

Zinc through the Three Domains of Life

Andreini, Claudia, Banci, Lucia, Bertini, Ivano, Rosato, Antonio

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 206 KB

english, 2006

8

Disorder and Sequence Repeats in Hub Proteins and Their Implications for Network Evolution

Dosztányi, Zsuzsanna, Chen, Jake, Dunker, A. Keith, Simon, István, Tompa, Peter

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 426 KB

english, 2006

9

A Soluble 3D LC/MS/MS Proteome of the Filamentous Cyanobacterium Nostoc p unctiforme

Anderson, D. C., Campbell, Elsie L., Meeks, John C.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 131 KB

english, 2006

10

Global Profiling of Surface Plasma Membrane Proteome of Oviductal Epithelial Cells

Sostaric, Edita, Georgiou, Aristophanes S., Wong, Chi H., Watson, Paul F., Holt, William V., Fazeli, Alireza

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 269 KB

english, 2006

11

Comparison of Hydroxylated Print Additives on Antibody Microarray Performance

Wu, Peng, Grainger, David W.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 899 KB

english, 2006

12

Declining Plasma Fibrinogen Alpha Fragment Identifies HER2-Positive Breast Cancer Patients and Reverts to Normal Levels after Surgery

Shi, Qian, Harris, Lyndsay N., Lu, Xin, Li, Xiaochun, Hwang, Justin, Gentleman, Robert, Iglehart, J. Dirk, Miron, Alexander

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 353 KB

english, 2006

13

Performance Evaluation of Existing De Novo Sequencing Algorithms

Pevtsov, Sergey, Fedulova, Irina, Mirzaei, Hamid, Buck, Charles, Zhang, Xiang

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 368 KB

english, 2006

14

Changes of Hippocampal Protein Levels during Postnatal Brain Development in the Rat

Weitzdörfer, Rachel, Höger, Harald, Pollak, Arnold, Lubec, Gert

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 406 KB

english, 2006

15

Comparative Proteome Analysis of Fractions Enriched for Membrane-Associated Proteins from Francisella tularensis Subsp. tularensis and F. tularensis Subsp. holarctica Strains

Pavkova, Ivona, Reichelova, Marketa, Larsson, Pär, Hubalek, Martin, Vackova, Jana, Forsberg, Ake, Stulik, Jiri

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 378 KB

english, 2006

16

New Products

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 156 KB

english, 2006

17

Investigating male infertility | Candidate biomarkers for neurodegenerative disorders | A new way to attack anthrax | The metabonomics of tea consumption | How to free proteins from formalin-preserved tissues | Honeybee proteomics | TOOLbox: Information-based acquisition | UniPep database | ProRata | Assessing protein-protein interactions

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 180 KB

english, 2006

18

Proteomic and Bioinformatic Characterization of the Biogenesis and Function of Melanosomes

Chi, An, Valencia, Julio C., Hu, Zhang-Zhi, Watabe, Hidenori, Yamaguchi, Hiroshi, Mangini, Nancy J., Huang, Hongzhan, Canfield, Victor A., Cheng, Keith C., Yang, Feng, Abe, Riichiro, Yamagishi, Shoich

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 341 KB

english, 2006

19

Proteomic Analysis of Hypertrophied Myocardial Protein Patterns in Renovascularly Hypertensive and Spontaneously Hypertensive Rats

Zhou, Si-Gui, Zhou, Shu-Feng, Huang, He-Qing, Chen, Jian-Wen, Huang, Min, Liu, Pei-Qing

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 607 KB

english, 2006

20

Probing the Structure of the Caulobacter c rescentus Ribosome with Chemical Labeling and Mass Spectrometry

Beardsley, Richard L., Running, William E., Reilly, James P.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 625 KB

english, 2006

21

Expressed Peptide Tags: An Additional Layer of Data for Genome Annotation

Savidor, Alon, Donahoo, Ryan S., Hurtado-Gonzales, Oscar, VerBerkmoes, Nathan C., Shah, Manesh B., Lamour, Kurt H., McDonald, W. Hayes

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 641 KB

english, 2006

22

Enrichment and Identification of Integral Membrane Proteins from Barley Aleurone Layers by Reversed-Phase Chromatography, SDS-PAGE, and LC−MS/MS

Hynek, Radovan, Svensson, Birte, Jensen, Ole Nørregaard, Barkholt, Vibeke, Finnie, Christine

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 222 KB

english, 2006

23

Meetings

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 64 KB

english, 2006

24

Sepsis Plasma Protein Profiling with Immunodepletion, Three-Dimensional Liquid Chromatography Tandem Mass Spectrometry, and Spectrum Counting

Shen, Zhouxin, Want, Elizabeth J., Chen, Wei, Keating, William, Nussbaumer, William, Moore, Richard, Gentle, Thomas M., Siuzdak, Gary

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 203 KB

english, 2006

25

Interactive Feature Finding in Liquid Chromatography Mass Spectrometry Data

Clifford, David, Buckley, Michael, Fung, Kim Y. C., Cosgrove, Leah

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 225 KB

english, 2006

26

Government and Society: PSI MI group examines antibody-antigen interactions | U.S. FDA to regulate algorithms in medical tests

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 46 KB

english, 2006

27

Dysregulation of Retinoid Transporters Expression in Body Fluids of Schizophrenia Patients

Wan, Chunling, Yang, Yifeng, Li, Huafang, La, Yujuan, Zhu, Hui, Jiang, Lei, Chen, Yongshuo, Feng, Guoyin, He, Lin

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 138 KB

english, 2006

28

Proteome Resolution by Two-Dimensional Gel Electrophoresis Varies with the Commercial Source of IPG Strips

Taylor, Regan C., Coorssen, Jens R.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 549 KB

english, 2006

29

Characterizing the Reproducibility of a Protein Profiling Method for the Analysis of Mouse Bronchoalveolar Lavage Fluid

McLachlan, Anne, Borchers, Michael, Velayutham, Prakash, Wagner, Michael, Limbach, Patrick A.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 288 KB

english, 2006

30

Fostering Proteomics in India

Sirdeshmukh, Ravi

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 135 KB

english, 2006

31

Research Profile: Profiling the plasma proteome with IMS/MS

Cassiday, Laura Tomky

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 97 KB

english, 2006

32

Research Profile: Digging for disease markers of sepsis

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 50 KB

english, 2006

33

Mass Spectrometry-Based Glycoproteomic Approach Involving Lysine Derivatization for Structural Characterization of Recombinant Human Erythropoietin

Cindrić, Mario, Bindila, Laura, Čepo, Tina, Peter-Katalinić, Jasna

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 312 KB

english, 2006

34

Serial Changes in Urinary Proteome Profile of Membranous Nephropathy: Implications for Pathophysiology and Biomarker Discovery

Ngai, Heidi Hoi-Yee, Sit, Wai-Hung, Jiang, Ping-Ping, Xu, Ruo-Jun, Wan, Jennifer Man-Fan, Thongboonkerd, Visith

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 654 KB

english, 2006

35

Proteomics Projects: HUPO HBPP: a case for big science

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 46 KB

english, 2006

36

Capillary Array Reversed-Phase Liquid Chromatography-Based Multidimensional Separation System Coupled with MALDI-TOF-TOF−MS Detection for High-Throughput Proteome Analysis

Gu, Xue, Deng, Chunhui, Yan, Guoquan, Zhang, Xiangmin

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 822 KB

english, 2006

37

An Initial Proteomic Analysis of Human Preterm Labor: Placental Membranes

Butt, R. Hussain, Lee, Maggie W. Y., Pirshahid, S. Ahmadi, Backlund, Peter S., Wood, Stephen, Coorssen, Jens R.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 551 KB

english, 2006

38

Multidimensional Proteomic Analysis of the Soluble Subproteome of the Emerging Nosocomial Pathogen Ochrobactrum a nthropi

Graham, Robert Leslie James, Pollock, Catherine E., O'Loughlin, S. Naomi, Ternan, Nigel G., Weatherly, D. Brent, Jackson, Philip J., Tarleton, Rick L., McMullan, Geoff

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 233 KB

english, 2006

39

Enrichment of Phosphopeptides by Fe 3+ -Immobilized Mesoporous Nanoparticles of MCM-41 for MALDI and Nano-LC−MS/MS Analysis

Pan, Chensong, Ye, Mingliang, Liu, Yuge, Feng, Shun, Jiang, Xiaogang, Han, Guanghui, Zhu, Junjie, Zou, Hanfa

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 265 KB

english, 2006

40

Identification of Ethylene-Mediated Protein Changes during Nodulation in Medicago t runcatula Using Proteome Analysis

Prayitno, Joko, Imin, Nijat, Rolfe, Barry G., Mathesius, Ulrike

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 980 KB

english, 2006

41

Toward Plasma Proteome Profiling with Ion Mobility-Mass Spectrometry

Valentine, Stephen J., Plasencia, Manolo D., Liu, Xiaoyun, Krishnan, Meera, Naylor, Stephen, Udseth, Harold R., Smith, Richard D., Clemmer, David E.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 482 KB

english, 2006

42

Time-Dependent Plasma Protein Changes in Streptozotocin-Induced Diabetic Rats before and after Fungal Polysaccharide Treatments

Kim, Sang Woo, Hwang, Hye Jin, Cho, Eun Jae, Oh, Jung Young, Baek, Yu-Mi, Choi, Jang Won, Yun, Jong Won

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 624 KB

english, 2006

43

Multiplexed Mass Spectrometric Immunoassay in Biomarker Research: A Novel Approach to the Determination of a Myocardial Infarct

Kiernan, Urban A., Nedelkov, Dobrin, Nelson, Randall W.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 145 KB

english, 2006

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