Volume 5; Issue 12

Journal of Proteome Research

Volume 5; Issue 12

1

The Medicago truncatula Small Protein Proteome and Peptidome

Zhang, Kerong, McKinlay, Carolyn, Hocart, Charles H., Djordjevic, Michael A.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 293 KB

english, 2006

2

A Clean, More Efficient Method for In-Solution Digestion of Protein Mixtures without Detergent or Urea

Kim, Sung Chan, Chen, Yue, Mirza, Shama, Xu, Yingda, Lee, Jaeick, Liu, Pingsheng, Zhao, Yingming

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 257 KB

english, 2006

3

Protein−RNA Cross-Linking in the Ribosomes of Yeast under Oxidative Stress

Mirzaei, Hamid, Regnier, Fred

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 992 KB

english, 2006

4

Global Comparison of the Membrane Subproteomes between a Multidrug-Resistant Acinetobacter baumannii Strain and a Reference Strain

Siroy, Axel, Cosette, Pascal, Seyer, Damien, Lemaître-Guillier, Christelle, Vallenet, David, Van Dorsselaer, Alain, Boyer-Mariotte, Sophie, Jouenne, Thierry, Dé, Emmanuelle

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 495 KB

english, 2006

5

Systematic Identification of the Subproteome of Escherichia coli Cell Envelope Reveals the Interaction Network of Membrane Proteins and Membrane-Associated Peripheral Proteins

Huang, Chuan-zhong, Lin, Xiang-min, Wu, Li-na, Zhang, Dan-feng, Liu, Dong, Wang, San-ying, Peng, Xuan-xian

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 487 KB

english, 2006

6

Prediction of Liquid Chromatographic Retention Times of Peptides Generated by Protease Digestion of the Escherichia coli Proteome Using Artificial Neural Networks

Shinoda, Kosaku, Sugimoto, Masahiro, Yachie, Nozomu, Sugiyama, Naoyuki, Masuda, Takeshi, Robert, Martin, Soga, Tomoyoshi, Tomita, Masaru

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 180 KB

english, 2006

7

Rat Neuropeptidomics by LC−MS/MS and MALDI−FTMS: Enhanced Dissection and Extraction Techniques Coupled with 2D RP-RP HPLC

Dowell, James A., Vander Heyden, William, Li, Lingjun

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 417 KB

english, 2006

8

Proteomic Analysis of Saccharomyces cerevisiae under High Gravity Fermentation Conditions

Pham, Trong Khoa, Chong, Poh Kuan, Gan, Chee Sian, Wright, Phillip C.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 317 KB

english, 2006

9

Elevated Levels of Phosphorylated Fibrinogen-α-Isoforms and Differential Expression of Other Post-Translationally Modified Proteins in the Plasma of Ovarian Cancer Patients

Ogata, Yuko, Hepplmann, Carrie J., Charlesworth, M. Cristine, Madden, Benjamin J., Miller, Melinda N., Kalli, Kimberly R., Cilby, William A., Bergen, H. Robert, Saggese, Diana A., Muddiman, David C.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 463 KB

english, 2006

10

Mild Protease Treatment as a Small-Scale Biochemical Method for Mitochondria Purification and Proteomic Mapping of Cytoplasm-Exposed Mitochondrial Proteins

Forner, Francesca, Arriaga, Edgar A., Mann, Matthias

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 314 KB

english, 2006

11

The Nuclear Proteome of Chickpea ( Cicer arietinum L.) Reveals Predicted and Unexpected Proteins

Pandey, Aarti, Choudhary, Mani Kant, Bhushan, Deepti, Chattopadhyay, Arnab, Chakraborty, Subhra, Datta, Asis, Chakraborty, Niranjan

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 386 KB

english, 2006

12

Characterization of the Human Pancreatic Islet Proteome by Two-Dimensional LC/MS/MS

Metz, Thomas O., Jacobs, Jon M., Gritsenko, Marina A., Fontès, Ghislaine, Qian, Wei-Jun, Camp, David G., Poitout, Vincent, Smith, Richard D.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 644 KB

english, 2006

13

VDAC1, Having a Shorter N-Terminus Than VDAC2 but Showing the Same Migration in an SDS−Polyacrylamide Gel, Is the Predominant Form Expressed in Mitochondria of Various Tissues

Yamamoto, Takenori, Yamada, Akiko, Watanabe, Masahiro, Yoshimura, Yuya, Yamazaki, Naoshi, Yoshimura, Yoshiyuki, Yamauchi, Takashi, Kataoka, Masatoshi, Nagata, Toshihiko, Terada, Hiroshi, Shinohara, Ya

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 371 KB

english, 2006

14

New Products

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 908 KB

english, 2006

15

Large-Scale Predictions of Gram-Negative Bacterial Protein Subcellular Locations

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 194 KB

english, 2006

16

Glycoproteomics of Trypanosoma cruzi Trypomastigotes Using Subcellular Fractionation, Lectin Affinity, and Stable Isotope Labeling

Atwood, James A., Minning, Todd, Ludolf, Fernanda, Nuccio, Arthur, Weatherly, Daniel B., Alvarez-Manilla, Gerardo, Tarleton, Rick, Orlando, Ron

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 203 KB

english, 2006

17

Proteomics Projects: ProteomeBinders consortium makes big plans

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 98 KB

english, 2006

18

Proteomic Identification of Altered Proteins in Skeletal Muscle During Chronic Potassium Depletion: Implications for Hypokalemic Myopathy

Thongboonkerd, Visith, Kanlaya, Rattiyaporn, Sinchaikul, Supachok, Parichatikanond, Paisal, Chen, Shui-Tein, Malasit, Prida

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 505 KB

english, 2006

19

Rapid Expression of Functional Genomic Libraries

Woodrow, Kim A., Airen, Isoken O., Swartz, James R.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 696 KB

english, 2006

20

Microfluidic Protein Detection through Genetically Engineered Bacterial Cells

Oh, Sang-Hyun, Lee, Sang-Ho, Kenrick, Sophia A., Daugherty, Patrick S., Soh, Hyongsok T.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 363 KB

english, 2006

21

Hexadecanedionic Acid−Sepharose 4B: A New Tool for Preparation of Albumin-Depleted Plasma

Soskic, Vukic, Schwall, Gerhard, Nyakatura, Elke, Poznanovic, Slobodan, Stegmann, Werner, Schrattenholz, Andre

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 423 KB

english, 2006

22

Research Profile: Identifying cell-surface glycoproteins

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 83 KB

english, 2006

23

Meeting News: Diet and time of day strongly influence metabolomic studies

Zubritsky, Elizabeth

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 239 KB

english, 2006

24

Calendar

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 63 KB

english, 2006

25

A Capital Workshop for the HUPO Proteomics Standards Initiative

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 133 KB

english, 2006

26

Analysis of the Soluble ATP-Binding Proteome of Plant Mitochondria Identifies New Proteins and Nucleotide Triphosphate Interactions within the Matrix

Ito, Jun, Heazlewood, Joshua L., Millar, A. Harvey

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 408 KB

english, 2006

27

PIGOK: Linking Protein Identity to Gene Ontology and Function

Jacob, Richard J., Cramer, Rainer

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 222 KB

english, 2006

28

Quality Assessment of Tandem Mass Spectra Based on Cumulative Intensity Normalization

Na, Seungjin, Paek, Eunok

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 321 KB

english, 2006

29

Challenges Related to Analysis of Protein Spot Volumes from Two-Dimensional Gel Electrophoresis As Revealed by Replicate Gels

Grove, Harald, Hollung, Kristin, Uhlen, Anne Kjersti, Martens, Harald

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 939 KB

english, 2006

30

A New Functional, Chemical Proteomics Technology To Identify Purine Nucleotide Binding Sites in Complex Proteomes

Hanoulle, Xavier, Van Damme, Jozef, Staes, An, Martens, Lennart, Goethals, Marc, Vandekerckhove, Joël, Gevaert, Kris

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 539 KB

english, 2006

31

TOOLbox: Ascore for phosphorylation sites | Manual analysis emulator | Mascot HTML and XML parser | Database tool for differential peptide expression | Currents: Subcellular localization of the proteome | Detecting tissue proteins in plasma | Finding phosphorylation sites with NL-ECD MS/MS | The normal liver proteome | Antibodies for PTMs | Does exercise make you smarter?

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 386 KB

english, 2006

32

Pharmacoproteomics Study of Cetuximab in Nasopharyngeal Carcinoma

Sung, Fion L., Pang, Ronald T. K., Ma, Brigette B. Y., Lee, May M. L., Chow, Shuk Man, Poon, Terence C. W., Chan, Anthony T. C.

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 252 KB

english, 2006

33

Research Profile: Overcoming the challenges of mammalian neuropeptidomics

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 82 KB

english, 2006

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