Volume 6; Issue 3

Journal of Proteome Research

Volume 6; Issue 3

1

Evaluation and Optimization of ZIC-HILIC-RP as an Alternative MudPIT Strategy

Boersema, Paul J., Divecha, Nullin, Heck, Albert J. R., Mohammed, Shabaz

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 275 KB

english, 2007

2

Metaproteomic Analysis of a Bacterial Community Response to Cadmium Exposure

Lacerda, Carla M. R., Choe, Leila H., Reardon, Kenneth F.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 426 KB

english, 2007

3

Glycogen Synthase Kinase 3β (GSK3β) Regulates Differentiation and Proliferation in Neural Stem Cells from the Rat Subventricular Zone

Maurer, Martin H., Brömme, Jens O., Feldmann,, Robert E., Järve, Anne, Sabouri, Fatemeh, Bürgers, Heinrich F., Schelshorn, Dominik W., Krüger, Carola, Schneider, Armin, Kuschinsky, Wolfgang

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 639 KB

english, 2007

4

Trypsin-Linked Copolymer MALDI Chips for Fast Protein Identification

Ibáñez, Alfredo J., Muck, Alexander, Halim, Vincentius, Svatoš, Aleš

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 303 KB

english, 2007

5

Differential Protein Expression Profile in the Intestinal Epithelium from Patients with Inflammatory Bowel Disease

Shkoda, Anna, Werner, Tanja, Daniel, Hannelore, Gunckel, Manuela, Rogler, Gerhard, Haller, Dirk

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 549 KB

english, 2007

6

BDNF Induces Widespread Changes in Synaptic Protein Content and Up-Regulates Components of the Translation Machinery: An Analysis Using High-Throughput Proteomics

Liao, Lujian, Pilotte, Julie, Xu, Tao, Wong, Catherine C. L., Edelman, Gerald M., Vanderklish, Peter, Yates, John R.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 759 KB

english, 2007

7

Proteomic Analyses of Songbird (Zebra finch; Taeniopygia guttata ) Retina

Sloley, Stephanie, Smith, Shannon, Algeciras, Mabel, Cavett, Valerie, Caldwell Busby, Jennifer A., London, Sarah, Clayton, David F., Bhattacharya, Sanjoy K.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 935 KB

english, 2007

8

Enrichment of the Basic/Cationic Urinary Proteome Using Ion Exchange Chromatography and Batch Adsorption

Thongboonkerd, Visith, Semangoen, Theptida, Chutipongtanate, Somchai

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 500 KB

english, 2007

9

Sulfation, the Up-and-Coming Post-Translational Modification: Its Role and Mechanism in Protein−Protein Interaction

Woods, Amina S., Wang, Hay-Yan J., Jackson, Shelley N.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 303 KB

english, 2007

10

Cathepsin D Is Secreted from M-BE Cells: Its Potential Role as a Biomarker of Lung Cancer

Lou, Xiaomin, Xiao, Ting, Zhao, Kang, Wang, Hao, Zheng, Hongwei, Lin, Dongmei, Lu, Youyong, Gao, Yanning, Cheng, Shujun, Liu, Siqi, Xu, Ningzhi

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 643 KB

english, 2007

11

Proteomic Identification of Lynchpin Urokinase Plasminogen Activator Receptor Protein Interactions Associated with Epithelial Cancer Malignancy

Saldanha, Rohit G., Molloy, Mark P., Bdeir, Khalil, Cines, Douglas B., Song, Xiaomin, Uitto, Pauliina M., Weinreb, Paul H., Violette, Shelia M., Baker, Mark S.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 333 KB

english, 2007

12

Currents: Proteotypic peptides in the spotlight | Proteomics of the secretory pathway | Preparing urine samples for metabonomics studies | iTRAQ labeling of intact proteins | TOOLbox: Salvaging true positives from "one-hit wonders" | De novo peptide identification with PILOT | ProCAT for protein microarrays | PRISM for spectral comparisons

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 185 KB

english, 2007

13

Proteomics: You Say Functional, I Say Structural

Stevens, Raymond C., Yates, John R.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 125 KB

english, 2007

14

N- linked Glycosylation Profiling of Pancreatic Cancer Serum Using Capillary Liquid Phase Separation Coupled with Mass Spectrometric Analysis

Zhao, Jia, Qiu, Weilian, Simeone, Diane M., Lubman, David M.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 935 KB

english, 2007

15

New Products

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 62 KB

english, 2007

16

A Limited Screen for Protein Interactions Reveals New Roles for Protein Phosphatase 1 in Cell Cycle Control and Apoptosis

Flores-Delgado, Guillermo, Liu, Cathy W. Y., Sposto, Richard, Berndt, Norbert

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 662 KB

english, 2007

17

Development of Efficient Protein Extraction Methods for Shotgun Proteome Analysis of Formalin-Fixed Tissues

Jiang, Xiaogang, Jiang, Xinning, Feng, Shun, Tian, Ruijun, Ye, Mingliang, Zou, Hanfa

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 355 KB

english, 2007

18

Proteome-wide Identification of HtrA2/Omi Substrates

Vande Walle, Lieselotte, Van Damme, Petra, Lamkanfi, Mohamed, Saelens, Xavier, Vandekerckhove, Joël, Gevaert, Kris, Vandenabeele, Peter

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 536 KB

english, 2007

19

High-Throughput Screening of Single-Chain Antibodies Using Multiplexed Flow Cytometry

Ayriss, Joanne, Woods, Travis, Bradbury, Andrew, Pavlik, Peter

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 600 KB

english, 2007

20

Isolation of Phosphopeptides by p I -Difference-Based Electrophoresis

Xu, Yingda, Sprung, Robert, Kwon, Sung Won, Kim, Sung Chan, Zhao, Yingming

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 384 KB

english, 2007

21

Enhancement of the Efficiency of Phosphoproteomic Identification by Removing Phosphates after Phosphopeptide Enrichment

Ishihama, Yasushi, Wei, Fan-Yan, Aoshima, Ken, Sato, Toshitaka, Kuromitsu, Junro, Oda, Yoshiya

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 188 KB

english, 2007

22

An Alternative Strategy for the Membrane Proteome Analysis of the Green Sulfur Bacterium Chlorobium tepidum Using Blue Native PAGE and 2-D PAGE on Purified Membranes

Aivaliotis, Michalis, Karas, Michael, Tsiotis, Georgios

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 684 KB

english, 2007

23

A Quantitative Proteomic Analysis of Light Adaptation in a Globally Significant Marine Cyanobacterium Prochlorococcus marinus MED4

Pandhal, Jagroop, Wright, Phillip C., Biggs, Catherine A.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 226 KB

english, 2007

24

NopM and NopD Are Rhizobial Nodulation Outer Proteins: Identification Using LC-MALDI and LC-ESI with a Monolithic Capillary Column

Rodrigues, João A., López-Baena, Francisco Javier, Ollero, Francisco Javier, Vinardell, José María, Espuny, María del Rosario, Bellogín, Ramon A., Ruiz-Sainz, José Enrique, Thomas, Jerry R., Sumpton,

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 366 KB

english, 2007

25

Profiling the Secretome of the Marine Bacterium Pseudoalteromonas tunicata Using Amine-Specific Isobaric Tagging (iTRAQ)

Evans, Flavia F., Raftery, Mark J., Egan, Suhelen, Kjelleberg, Staffan

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 272 KB

english, 2007

26

Various Members of the E2F Transcription Factor Family Interact in vivo with the Corepressor Alien

Escher, Niko, Kob, Robert, Tenbaum, Stephan P., Eisold, Michael, Baniahmad, Aria, von Eggeling, Ferdinand, Melle, Christian

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 209 KB

english, 2007

27

Enhanced Analysis of the Mouse Plasma Proteome Using Cysteine-Containing Tryptic Glycopeptides

Bernhard, Oliver K., Kapp, Eugene A., Simpson, Richard J.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 208 KB

english, 2007

28

Large-Scale Phosphorylation Analysis of α-Factor-Arrested Saccharomyces cerevisiae

Li, Xue, Gerber, Scott A., Rudner, Adam D., Beausoleil, Sean A., Haas, Wilhelm, Villén, Judit, Elias, Joshua E., Gygi, Steve P.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 531 KB

english, 2007

29

Identifying Pharmacodynamic Protein Markers of Centrally Active Drugs in Humans: A Pilot Study in a Novel Clinical Model

Patil, Sandeep T., Higgs, Richard E., Brandt, John E., Knierman, Michael D., Gelfanova, Valentina, Butler, Jon P., Downing, AnnCatherine M., Dorocke, Jill, Dean, Robert A., Potter, William Z., Michels

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 664 KB

english, 2007

30

Meetings

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 64 KB

english, 2007

31

Altered Chaperone and Protein Turnover Regulators Expression in Cultured Skin Fibroblasts from Type 1 Diabetes Mellitus with Nephropathy

Tessari, Paolo, Puricelli, Lucia, Iori, Elisabetta, Arrigoni, Giorgio, Vedovato, Monica, James, Peter, Coracina, Anna, Millioni, Renato

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 507 KB

english, 2007

32

Tandem Affinity Monolithic Microcolumns with Immobilized Protein A, Protein G‘, and Antibodies for Depletion of High Abundance Proteins from Serum Samples: Integrated Microcolumn-Based Fluidic System for Simultaneous Depletion and Tryptic Digestion

Jmeian, Yazen, El Rassi, Ziad

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 294 KB

english, 2007

33

Assessment of Hierarchical Clustering Methodologies for Proteomic Data Mining J. Proteome Res . 2007 , 6 (1), 358−366.

Meunier, Bruno, Dumas, Emilie, Piec, Isabelle, Béchet, Daniel, Hébraud, Michel, Hocquette, Jean-François

Journal:

Journal of Proteome Research

Year:

2007

File:

PDF, 32 KB

2007

34

Research Profile: Antibody arrays shed light on PP1?s possible role in lung cancer

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 95 KB

english, 2007

35

Research Profile: N-glycan profiling to identify pancreatic cancer biomarkers

Cassiday, Laura Tomky

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 105 KB

english, 2007

36

Proteomics Projects: Proteomics in the garden: the Arabidopsis 2010 Project

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 78 KB

english, 2007

37

Development of Reagents for Differential Protein Quantitation by Subtractive Parent (Precursor) Ion Scanning

Wåhlander, Åsa, Arrigoni, Giorgio, Wårell, Kristofer, Levander, Fredrik, Palmgren, Ronnie, Maloisel, Jean-Luc, Busson, Philippe, James, Peter

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 1007 KB

english, 2007