Volume 6; Issue 5

Journal of Proteome Research

Volume 6; Issue 5

1

Recoverin as a Redox-Sensitive Protein

Permyakov, Sergei E., Nazipova, Aliya A., Denesyuk, Alexander I., Bakunts, Anush G., Zinchenko, Dmitry V., Lipkin, Valery M., Uversky, Vladimir N., Permyakov, Eugene A.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 341 KB

english, 2007

2

Estimating the Statistical Significance of Peptide Identifications from Shotgun Proteomics Experiments

Higgs, Richard E., Knierman, Michael D., Bonner Freeman, Angela, Gelbert, Lawrence M., Patil, Sandeep T., Hale, John E.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 363 KB

english, 2007

3

iTRAQ-Coupled 2D LC−MS/MS Analysis on Protein Profile in Vascular Smooth Muscle Cells Incubated with S - and R -Enantiomers of Propranolol: Possible Role of Metabolic Enzymes Involved in Cellular Anabolism and Antioxidant Activity

Sui, Jianjun, Tan, Tuan Lin, Zhang, Jianhua, Ching, Chi Bun, Chen, Wei Ning

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 268 KB

english, 2007

4

Novel Subunits of the Mammalian Hsp90 Signal Transduction Chaperone

Te, Jeannie, Jia, Letong, Rogers, Janet, Miller, Amanda, Hartson, Steven D.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 357 KB

english, 2007

5

Post-Transcriptional Control of the S accharomyces cerevisiae Proteome by 14-3-3 Proteins

Bruckmann, Astrid, Hensbergen, Paul J., Balog, Crina I. A., Deelder, André M., Steensma, H. Yde, van Heusden, G. Paul H.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 388 KB

english, 2007

6

Inhibition of Intrinsic Proteolytic Activities Moderates Preanalytical Variability and Instability of Human Plasma

Yi, Jizu, Kim, Changki, Gelfand, Craig A.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 779 KB

english, 2007

7

Membrane Proteomic Analysis of Arabidopsis thaliana Using Alternative Solubilization Techniques

Mitra, Srijeet K., Gantt, John A., Ruby, James F., Clouse, Steven D., Goshe, Michael B.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 299 KB

english, 2007

8

The Epidermis of Scales in Gecko Lizards Contains Multiple Forms of β-Keratins Including Basic Glycine-Proline-Serine-Rich Proteins

Toni, M., Dalla Valle, L., Alibardi, L.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 2.13 MB

english, 2007

9

Functional Anthology of Intrinsic Disorder. 3. Ligands, Post-Translational Modifications, and Diseases Associated with Intrinsically Disordered Proteins

Xie, Hongbo, Vucetic, Slobodan, Iakoucheva, Lilia M., Oldfield, Christopher J., Dunker, A. Keith, Obradovic, Zoran, Uversky, Vladimir N.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 182 KB

english, 2007

10

Functional Anthology of Intrinsic Disorder. 1. Biological Processes and Functions of Proteins with Long Disordered Regions

Xie, Hongbo, Vucetic, Slobodan, Iakoucheva, Lilia M., Oldfield, Christopher J., Dunker, A. Keith, Uversky, Vladimir N., Obradovic, Zoran

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 257 KB

english, 2007

11

Proteome Approach To Characterize Proteins Induced by Antagonist Yeast and Salicylic Acid in Peach Fruit

Chan, Zhulong, Qin, Guozheng, Xu, Xiangbin, Li, Boqiang, Tian, Shiping

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 1.09 MB

english, 2007

12

15 N Metabolic Labeling of Mammalian Tissue with Slow Protein Turnover

McClatchy, Daniel B., Dong, Meng-Qiu, Wu, Christine C., Venable, John D., Yates, John R.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 182 KB

english, 2007

13

Metabolic Modulation Induced by Chronic Hypoxia in Rats Using a Comparative Proteomic Analysis of Skeletal Muscle Tissue

De Palma, S., Ripamonti, M., Viganò, A., Moriggi, M., Capitanio, D., Samaja, M., Milano, G., Cerretelli, P., Wait, R., Gelfi, C.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 728 KB

english, 2007

14

Functional Anthology of Intrinsic Disorder. 2. Cellular Components, Domains, Technical Terms, Developmental Processes, and Coding Sequence Diversities Correlated with Long Disordered Regions

Vucetic, Slobodan, Xie, Hongbo, Iakoucheva, Lilia M., Oldfield, Christopher J., Dunker, A. Keith, Obradovic, Zoran, Uversky, Vladimir N.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 202 KB

english, 2007

15

Research Profile: Understanding pathogen resistance in fruit

Willis, Randall C

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 80 KB

english, 2007

16

An Analytical Chemist’s Perspective

Hancock, William S.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 214 KB

english, 2007

17

Euk-mPLoc: A Fusion Classifier for Large-Scale Eukaryotic Protein Subcellular Location Prediction by Incorporating Multiple Sites

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 156 KB

english, 2007

18

Modeling the Isoelectric Focusing of Peptides in an OFFGEL Multicompartment Cell

Lam, Hoang-Trang, Josserand, Jacques, Lion, Niels, Girault, H. H.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 512 KB

english, 2007

19

Proteome and Phosphoproteome Differential Expression under Salinity Stress in Rice ( Oryza sativa ) Roots

Chitteti, Brahmananda Reddy, Peng, Zhaohua

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 803 KB

english, 2007

20

Comparative Time-Dependent Analysis of Potential Inflammation Biomarkers in Lymphoma-Bearing SJL Mice

Kristiansson, Monica H., Bhat, Vadiraja B., Babu, I. Ramesh, Wishnok, John S., Tannenbaum, Steven R.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 369 KB

english, 2007

21

Probing the Membrane Interface-Interacting Proteome Using Photoactivatable Lipid Cross-Linkers

Gubbens, Jacob, Vader, Pieter, Damen, J. Mirjam A., O'Flaherty, Martina C., Slijper, Monique, de Kruijff, Ben, de Kroon, Anton I. P. M.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 397 KB

english, 2007

22

An Experimentally Derived Database of Candidate Ras-Interacting Proteins

Goldfinger, Lawrence E., Ptak, Celeste, Jeffery, Erin D., Shabanowitz, Jeffrey, Han, Jaewon, Haling, Jacob R., Sherman, Nicholas E., Fox, Jay W., Hunt, Donald F., Ginsberg, Mark H.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 245 KB

english, 2007

23

Alterations in the Serum Glycome Due to Metastatic Prostate Cancer

Kyselova, Zuzana, Mechref, Yehia, Al Bataineh, Mohammad M., Dobrolecki, Lacey E., Hickey, Robert J., Vinson, Jake, Sweeney, Christopher J., Novotny, Milos V.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 636 KB

english, 2007

24

Currents: Using proteomics and cell biology to blaze a trail through blood vessels | Proteomics of HDL | Prenatal vitamin D deficiency and neuropsychiatric disorders | Who will get COPD? | Detection of the xenometabolome | Ham with a pinch of peptides | TOOLbox: SpectraST for spectral library searching | Standard format for iTRAQ | TOPP | Peak screening

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 162 KB

english, 2007

25

Site-Specific Pyrolysis-Induced Cleavage at Aspartic Acid Residue in Peptides and Proteins

Zhang, Shaofeng, Basile, Franco

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 169 KB

english, 2007

26

New Products

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 83 KB

english, 2007

27

Research Profile: See Spot age: a lifelong dog metabonomic study

Cassiday, Laura

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 105 KB

english, 2007

28

Surface Accessibility of Protein Post-Translational Modifications

Pang, Chi Nam Ignatius, Hayen, Andrew, Wilkins, Marc Ronald

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 521 KB

english, 2007

29

Mining Phosphopeptide Signals in Liquid Chromatography−Mass Spectrometry Data for Protein Phosphorylation Analysis

Wu, Hsin-Yi, Tseng, Vincent Shin-Mu, Liao, Pao-Chi

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 277 KB

english, 2007

30

Meeting News: Identifying peptides without a database

Cottingham, Katie

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 76 KB

english, 2007

31

Diversity of cAMP-Dependent Protein Kinase Isoforms and Their Anchoring Proteins in Mouse Ventricular Tissue

Scholten, Arjen, van Veen, Toon A. B., Vos, Marc A., Heck, Albert J. R.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 1.49 MB

english, 2007

32

Identification of Human Olfactory Cleft Mucus Proteins Using Proteomic Analysis

Débat, Hélène, Eloit, Corinne, Blon, Florence, Sarazin, Benoît, Henry, Céline, Huet, Jean-Claude, Trotier, Didier, Pernollet, Jean-Claude

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 880 KB

english, 2007

33

Immunity Promotion and Proteomic Identification in Mice upon Exposure to Manganese Superoxide Dismutase Expressed in Silkworm Larvae

Yue, Wan-fu, Liu, Jian-mei, Sun, Jian-tong, Li, Guang-li, Li, Xing-hua, Wu, Xiao-feng, Sun, Hong-xiang, Zhou, Ji-yong, Miao, Yun-gen

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 450 KB

english, 2007

34

Meetings

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 62 KB

english, 2007

35

Nuclear Phospholipase C Gamma: Punctate Distribution and Association with the Promyelocytic Leukemia Protein

Ferguson, Brian J., Dovey, Claire L., Lilley, Kathryn, Wyllie, Andrew H., Rich, Tina

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 346 KB

english, 2007

36

Proteomics of Neuroendocrine Secretory Vesicles Reveal Distinct Functional Systems for Biosynthesis and Exocytosis of Peptide Hormones and Neurotransmitters

Wegrzyn, Jill, Lee, Jean, Neveu, John M., Lane, William S., Hook, Vivian

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 777 KB

english, 2007

37

Glycoprotein Microarrays with Multi-Lectin Detection: Unique Lectin Binding Patterns as a Tool for Classifying Normal, Chronic Pancreatitis and Pancreatic Cancer Sera

Zhao, Jia, Patwa, Tasneem H., Qiu, Weilian, Shedden, Kerby, Hinderer, Robert, Misek, David E., Anderson, Michelle A., Simeone, Diane M., Lubman, David M.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 632 KB

english, 2007

38

Preparative Peptide Isoelectric Focusing as a Tool for Improving the Identification of Lysine-Acetylated Peptides from Complex Mixtures

Xie, Hongwei, Bandhakavi, Sricharan, Roe, Mikel R., Griffin, Timothy J.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 214 KB

english, 2007

39

Dosage-Dependent Proteome Response of Shewanella oneidensis MR-1 to Acute Chromate Challenge

Thompson, Melissa R., VerBerkmoes, Nathan C., Chourey, Karuna, Shah, Manesh, Thompson, Dorothea K., Hettich, Robert L.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 378 KB

english, 2007

40

Determining the Overall Merit of Protein Identification Data Sets: rho- Diagrams and rho- Scores

Fenyo, David, Phinney, Brett S., Beavis, Ronald C.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 138 KB

english, 2007

41

Metabonomic Investigations of Aging and Caloric Restriction in a Life-Long Dog Study

Wang, Yulan, Lawler, Dennis, Larson, Brian, Ramadan, Ziad, Kochhar, Sunil, Holmes, Elaine, Nicholson, Jeremy K.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 2.67 MB

english, 2007

42

Imaging Mass Spectrometry of Neuropeptides in Decapod Crustacean Neuronal Tissues

DeKeyser, Stephanie S., Kutz-Naber, Kimberly K., Schmidt, Joshua J., Barrett-Wilt, Gregory A., Li, Lingjun

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 962 KB

english, 2007

43

Urinary Proteome Profiling Using Microfluidic Technology on a Chip

Thongboonkerd, Visith, Songtawee, Napat, Sritippayawan, Suchai

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 242 KB

english, 2007