Volume 78

Journal of Proteomics

Volume 78

1

A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis

Wang, Xu, Bian, Yangyang, Cheng, Kai, Gu, Li-Fei, Ye, Mingliang, Zou, Hanfa, Sun, Samuel Sai-Ming, He, Jun-Xian

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 2.40 MB

english, 2013

2

Proteomic investigation of the interactome of FMNL1 in hematopoietic cells unveils a role in calcium-dependent membrane plasticity

Han, Yanan, Yu, Guangchuang, Sarioglu, Hakan, Caballero-Martinez, Amélia, Schlott, Fabian, Ueffing, Marius, Haase, Hannelore, Peschel, Christian, Krackhardt, Angela M.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 748 KB

english, 2013

3

Improved proteomic profiling of the cell surface of culture-expanded human bone marrow multipotent stromal cells

Mindaye, Samuel T., Ra, Moonjin, Lo Surdo, Jessica, Bauer, Steven R., Alterman, Michail A.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 994 KB

english, 2013

4

Comparative proteomic analysis of early somatic and zygotic embryogenesis in Theobroma cacao L.

Noah, Alexandre Mboene, Niemenak, Nicolas, Sunderhaus, Stephanie, Haase, Christin, Omokolo, Denis Ndoumou, Winkelmann, Traud, Braun, Hans-Peter

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 634 KB

english, 2013

5

Meat science: From proteomics to integrated omics towards system biology

D'Alessandro, Angelo, Zolla, Lello

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.64 MB

english, 2013

6

A combined de novo protein sequencing and cDNA library approach to the venomic analysis of Chinese spider Araneus ventricosus

Duan, Zhigui, Cao, Rui, Jiang, Liping, Liang, Songping

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.06 MB

english, 2013

7

Proteomic analysis of endothelial cell secretome: A means of studying the pleiotropic effects of Hmg-CoA reductase inhibitors

Brioschi, Maura, Lento, Sabrina, Tremoli, Elena, Banfi, Cristina

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.53 MB

english, 2013

8

Proteomic profiling in Lipocalin 2 deficient mice under normal and inflammatory conditions

Labbus, Kirsten, Henning, Marc, Borkham-Kamphorst, Erawan, Geisler, Cordelia, Berger, Thorsten, Mak, Tak W., Knüchel, Ruth, Meyer, Helmut E., Weiskirchen, Ralf, Henkel, Corinna

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 926 KB

english, 2013

9

Contribution of cells undergoing epithelial–mesenchymal transition to the tumour microenvironment

Mathias, Rommel A., Gopal, Shashi K., Simpson, Richard J.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 626 KB

english, 2013

10

An enteral leucine supply modulates human duodenal mucosal proteome and decreases the expression of enzymes involved in fatty acid beta-oxidation

Goichon, Alexis, Chan, Philippe, Lecleire, Stéphane, Coquard, Aude, Cailleux, Anne-Françoise, Walrand, Stéphane, Lerebours, Eric, Vaudry, David, Déchelotte, Pierre, Coëffier, Moïse

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 938 KB

english, 2013

11

Changes of proteome and phosphoproteome trigger embryo–larva transition of honeybee worker (Apis mellifera ligustica)

Gala, Alemayehu, Fang, Yu, Woltedji, Dereje, Zhang, Lan, Han, Bin, Feng, Mao, Li, Jianke

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 2.17 MB

english, 2013

12

Change in protein content during seed germination of a high altitude plant Podophyllum hexandrum Royle

Dogra, Vivek, Ahuja, Paramvir Singh, Sreenivasulu, Yelam

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 924 KB

english, 2013

13

Proteomic analysis of apricot fruit during ripening

D'Ambrosio, Chiara, Arena, Simona, Rocco, Mariapina, Verrillo, Francesca, Novi, Gianfranco, Viscosi, Vincenzo, Marra, Mauro, Scaloni, Andrea

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 992 KB

english, 2013

14

Protein expression profiles of human lymph and plasma mapped by 2D-DIGE and 1D SDS–PAGE coupled with nanoLC–ESI–MS/MS bottom-up proteomics

Clement, Cristina C., Aphkhazava, David, Nieves, Edward, Callaway, Myrasol, Olszewski, Waldemar, Rotzschke, Olaf, Santambrogio, Laura

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.81 MB

english, 2013

15

The chains of the heterodimeric amphibian skin antimicrobial peptide, distinctin, are encoded by separate messenger RNAs

Evaristo, Geisa, Pinkse, Martijn, Wang, Lei, Zhou, Mei, Wu, Youjia, Wang, Hui, Chen, Tianbao, Shaw, Chris, Verhaert, Peter

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 842 KB

english, 2013

16

Differential proteomic analysis of drought stress response in leaves of common bean (Phaseolus vulgaris L.)

Zadražnik, Tanja, Hollung, Kristin, Egge-Jacobsen, Wolfgang, Meglič, Vladimir, Šuštar-Vozlič, Jelka

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.08 MB

english, 2013

17

Differential proteomic analysis of Aspergillus fumigatus morphotypes reveals putative drug targets

Kubitschek-Barreira, Paula H., Curty, Nathalia, Neves, Gabriela W.P., Gil, Concha, Lopes-Bezerra, Leila M.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.59 MB

english, 2013

18

Proteomic changes in Actinidia chinensis shoot during systemic infection with a pandemic Pseudomonas syringae pv. actinidiae strain

Petriccione, Milena, Di Cecco, Ilaria, Arena, Simona, Scaloni, Andrea, Scortichini, Marco

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 996 KB

english, 2013

19

Purification and Identification of antihypertensive peptides in Spanish dry-cured ham

Escudero, Elizabeth, Mora, Leticia, Fraser, Paul D., Aristoy, María-Concepción, Arihara, Keizo, Toldrá, Fidel

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 330 KB

english, 2013

20

Phosphoproteome analyses reveal specific implications of Hcls1, p21-activated kinase 1 and Ezrin in proliferation of a myeloid progenitor cell line downstream of wild-type and ITD mutant Fms-like tyrosine kinase 3 receptors

Habif, Guillaume, Grasset, Marie-France, Kieffer-Jaquinod, Sylvie, Kuhn, Lauriane, Mouchiroud, Guy, Gobert-Gosse, Stéphanie

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.37 MB

english, 2013

21

Discovery and initial verification of differentially abundant proteins between multiple sclerosis patients and controls using iTRAQ and SID-SRM

Kroksveen, Ann C., Aasebø, Elise, Vethe, Heidrun, Van Pesch, Vincent, Franciotta, Diego, Teunissen, Charlotte E., Ulvik, Rune J., Vedeler, Christian, Myhr, Kjell-Morten, Barsnes, Harald, Berven, Frode

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 816 KB

english, 2013

22

Hypoxia-induced changes in the zebrafish (Danio rerio) skeletal muscle proteome

Chen, Kan, Cole, Richard B., Rees, Bernard B.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 774 KB

english, 2013

23

Systematic analysis of natural antibody responses to P. falciparum merozoite antigens by protein arrays

Fan, Yan-Ting, Wang, Yue, Ju, Chuan, Zhang, Ting, Xu, Bin, Hu, Wei, Chen, Jun-Hu

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.50 MB

english, 2013

24

Comparative vesicle proteomics reveals selective regulation of protein expression in chestnut blight fungus by a hypovirus

Wang, Jinzi, Wang, Fangzhen, Feng, Youjun, Mi, Ke, Chen, Qi, Shang, Jinjie, Chen, Baoshan

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 967 KB

english, 2013

25

Laser microdissection and two-dimensional difference gel electrophoresis reveal proteomic intra-tumor heterogeneity in colorectal cancer

Sugihara, Yutaka, Taniguchi, Hirokazu, Kushima, Ryoji, Tsuda, Hitoshi, Kubota, Daisuke, Ichikawa, Hiroshi, Fujita, Shin, Kondo, Tadashi

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 4.12 MB

english, 2013

26

Identification of glycosyltransferases involved in cell wall synthesis of wheat endosperm

Suliman, M., Chateigner-Boutin, A.-L., Francin-Allami, M., Partier, A., Bouchet, B., Salse, J., Pont, C., Marion, J., Rogniaux, H., Tessier, D., Guillon, F., Larré, C.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.33 MB

english, 2013

27

Co-expression analysis, proteomic and metabolomic study on the impact of a Deg/HtrA protease triple mutant in Synechocystis sp. PCC 6803 exposed to temperature and high light stress

Miranda, Hélder, Cheregi, Otilia, Netotea, Sergiu, Hvidsten, Torgeir R., Moritz, Thomas, Funk, Christiane

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.75 MB

english, 2013

28

The sarcoplasmic fish proteome: Pathways, metabolic networks and potential bioactive peptides for nutritional inferences

Carrera, Mónica, Cañas, Benito, Gallardo, José M.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.54 MB

english, 2013

29

Proteomic analysis of the cilia membrane of Paramecium tetraurelia

Yano, Junji, Rajendran, Anbazhagan, Valentine, Megan S., Saha, Madhurima, Ballif, Bryan A., Van Houten, Judith L.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 866 KB

english, 2013

30

Tear proteome and protein network analyses reveal a novel pentamarker panel for tear film characterization in dry eye and meibomian gland dysfunction

Soria, J., Durán, J.A., Etxebarria, J., Merayo, J., González, N., Reigada, R., García, I., Acera, A., Suárez, T.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.50 MB

english, 2013

31

MALDI-TOF MS analysis of human and animal Brachyspira species and benefits of database extension

Calderaro, Adriana, Piccolo, Giovanna, Montecchini, Sara, Buttrini, Mirko, Gorrini, Chiara, Rossi, Sabina, Arcangeletti, Maria Cristina, De Conto, Flora, Medici, Maria Cristina, Chezzi, Carlo

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 706 KB

english, 2013

32

The response of Mucor plumbeus to pentachlorophenol: A toxicoproteomics study

Carvalho, M.B., Martins, I., Medeiros, J., Tavares, S., Planchon, S., Renaut, J., Núñez, O., Gallart-Ayala, H., Galceran, M.T., Hursthouse, A., Silva Pereira, C.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 680 KB

english, 2013

33

Proteomic identification of the macrophage-capping protein as a protein contributing to the malignant features of hepatocellular carcinoma

Kimura, Kazuya, Ojima, Hidenori, Kubota, Daisuke, Sakumoto, Marimu, Nakamura, Yukiko, Tomonaga, Tsuyoshi, Kosuge, Tmoo, Kondo, Tadashi

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 2.23 MB

english, 2013

34

Root protein profile changes induced by Al exposure in two rice cultivars differing in Al tolerance

Wang, Chang Yi, Shen, Ren Fang, Wang, Chao, Wang, Wei

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 2.12 MB

english, 2013

35

Proteomic analysis of the phenotype of the scaleless wings mutant in the silkworm, Bombyx mori

Shi, Xiao-Feng, Bin Han,, Li, Yi-Nü, Yi, Yong-Zhu, Li, Xiao-Ming, Shen, Xing-Jia, Zhang, Zhi-Fang

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.27 MB

english, 2013

36

In-depth insight into in vivo apoplastic secretome of rice-Magnaporthe oryzae interaction

Kim, Sang Gon, Wang, Yiming, Lee, Kyung Hee, Park, Zee-Yong, Park, Jongsun, Wu, Jingni, Kwon, Soon Jae, Lee, Yong-Hwan, Agrawal, Ganesh Kumar, Rakwal, Randeep, Kim, Sun Tae, Kang, Kyu Young

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.63 MB

english, 2013

37

Proteomics of Tribolium castaneum seminal fluid proteins: Identification of an angiotensin-converting enzyme as a key player in regulation of reproduction

Xu, Jingjing, Baulding, James, Palli, Subba Reddy

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 828 KB

english, 2013

38

Editorial Board

Journal:

Journal of Proteomics

Year:

2013

File:

PDF, 33 KB

2013

39

An iTRAQ-based mitoproteomics approach for profiling the nephrotoxicity mechanisms of ochratoxin A in HEK 293 cells

Shen, Xiao Li, Zhang, Yu, Xu, Wentao, Liang, Rui, Zheng, Juanjuan, Luo, YunBo, Wang, Yan, Huang, Kunlun

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 2.18 MB

english, 2013

40

Quantitative proteomic analysis of the exoelectrogenic bacterium Arcobacter butzleri ED-1 reveals increased abundance of a flagellin protein under anaerobic growth on an insoluble electrode

Pereira-Medrano, Ana G., Knighton, Matthew, Fowler, Gregory J.S., Ler, Zi Yen, Pham, Trong Khoa, Ow, Saw Yen, Free, Andrew, Ward, Bruce, Wright, Phillip C.

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1021 KB

english, 2013

41

Quantitative proteomics reveals dynamic responses of Synechocystis sp. PCC 6803 to next-generation biofuel butanol

Tian, Xiaoxu, Chen, Lei, Wang, Jiangxin, Qiao, Jianjun, Zhang, Weiwen

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1014 KB

english, 2013

42

Analysis of human serum phosphopeptidome by a focused database searching strategy

Zhu, Jun, Wang, Fangjun, Cheng, Kai, Song, Chunxia, Qin, Hongqiang, Hu, Lianghai, Figeys, Daniel, Ye, Mingliang, Zou, Hanfa

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 731 KB

english, 2013

43

Comparative proteomic analysis for assessment of the ecological significance of maize and peanut intercropping

Xiong, Hongchun, Shen, Hongyun, Zhang, Lixia, Zhang, Yanxiang, Guo, Xiaotong, Wang, Pengfei, Duan, Penggen, Ji, Chunqiao, Zhong, Lina, Zhang, Fusuo, Zuo, Yuanmei

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.06 MB

english, 2013

44

A comparative proteomic analysis provides insights into pigment biosynthesis in brown color fiber

Li, Yan-Jun, Zhang, Xin-Yu, Wang, Fu-Xin, Yang, Chun-Lin, Liu, Feng, Xia, Gui-Xian, Sun, Jie

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.50 MB

english, 2013