Volume 254; Issue 1

Journal of Theoretical Biology

Volume 254; Issue 1

1

A methodology for performing global uncertainty and sensitivity analysis in systems biology

Simeone Marino, Ian B. Hogue, Christian J. Ray, Denise E. Kirschner

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 1.58 MB

english, 2008

2

Redefining the maximum sustainable yield for the Schaefer population model including multiplicative environmental noise

Nicolas Bousquet, Thierry Duchesne, Louis-Paul Rivest

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 468 KB

english, 2008

3

Predicting the asymmetric response of a genetic switch to noise

Anna Ochab-Marcinek

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 374 KB

english, 2008

4

How quantitative measures unravel design principles in multi-stage phosphorylation cascades

Simone Frey, Thomas Millat, Stefan Hohmann, Olaf Wolkenhauer

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 444 KB

english, 2008

5

A 3-D model used to explore how cell adhesion and stiffness affect cell sorting and movement in multicellular systems

Eirikur Palsson

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 2.43 MB

english, 2008

6

Modelling the ontogeny of ectotherms exhibiting indeterminate growth

André Dumas, James France

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 222 KB

english, 2008

7

Statistical cautions when estimating DEBtox parameters

Elise Billoir, Marie Laure Delignette-Muller, Alexandre R.R. Péry, Olivier Geffard, Sandrine Charles

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 1.11 MB

english, 2008

8

A network model of E. coli O157 transmission within a typical UK dairy herd: The effect of heterogeneity and clustering on the prevalence of infection

J. Turner, R.G. Bowers, D. Clancy, M.C. Behnke, R.M. Christley

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 399 KB

english, 2008

9

The importance of culling in Johne's disease control

Z. Lu, R.M. Mitchell, R.L. Smith, J.S. Van Kessel, P.P. Chapagain, Y.H. Schukken, Y.T. Grohn

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 1.41 MB

english, 2008

10

Microsatellites that violate Chargaff's second parity rule have base order-dependent asymmetries in the folding energies of complementary DNA strands and may not drive speciation

Chiyu Zhang, Shungao Xu, Ji-Fu Wei, Donald R. Forsdyke

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 1.91 MB

english, 2008

11

Mate choice for non-additive genetic benefits: A resolution to the lek paradox

Bryan D. Neff, Trevor E. Pitcher

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 443 KB

english, 2008

12

Determination of kinetic parameters of enzyme-catalyzed reactions with a minimum number of velocity measurements

Robert A. Alberty

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 681 KB

english, 2008

13

The role of alternative genetic codes in viral evolution and emergence

Laura A. Shackelton, Edward C. Holmes

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 1.16 MB

english, 2008

14

Modelling in vitro growth of dense root networks

Peter Bastian, Andrés Chavarría-Krauser, Christian Engwer, Willi Jäger, Sven Marnach, Mariya Ptashnyk

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 508 KB

english, 2008

15

Stochastic effects and bistability in T cell receptor signaling

Tomasz Lipniacki, Beata Hat, James R. Faeder, William S. Hlavacek

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 2.05 MB

english, 2008

16

Complex temporal patterns of spontaneous initiation and termination of reentry in a loop of cardiac tissue

H. Sedaghat, M.A. Wood, J.W. Cain, C.K. Cheng, C.M. Baumgarten, D.M. Chan

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 634 KB

english, 2008

17

Schizophrenia—a parameters’ game?

Anca Raˇdulescu

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 805 KB

english, 2008

18

Optimizing the codon usage of synthetic gene with QPSO algorithm

Yujie Cai, Jun Sun, Jie Wang, Yanrui Ding, Na Tian, Xiangru Liao, Wenbo Xu

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 210 KB

english, 2008

19

Short term synaptic depression model—Analytical solution and analysis

Joanna Mazurkiewicz, Jarosław Żygierewicz, Mikołaj Korzyński

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 369 KB

english, 2008

20

Editorial board

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 1.47 MB

english, 2008

21

Improved variance estimators for one- and two-parameter models of nucleotide substitution

Hsiuying Wang, Yun-Huei Tzeng, Wen-Hsiung Li

Journal:

Journal of Theoretical Biology

Year:

2008

Language:

english

File:

PDF, 132 KB

english, 2008