Volume 336

Journal of Theoretical Biology

Volume 336

1

Chromatin computation: Epigenetic inheritance as a pattern reconstruction problem

Arnold, Christian, Stadler, Peter F., Prohaska, Sonja J.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.75 MB

english, 2013

2

A critical study of network models for neural networks and their dynamics

Govan, G., Xenos, A., Frisco, P.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 834 KB

english, 2013

3

Hydrodynamics and energy-saving swimming techniques of Pacific bluefin tuna

Takagi, Tsutomu, Tamura, Yumiko, Weihs, Daniel

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.10 MB

english, 2013

4

On the spatial dynamics and oscillatory behavior of a predator-prey model based on cellular automata and local particle swarm optimization

Molina, Mario Martínez, Moreno-Armendáriz, Marco A., Carlos Seck Tuoh Mora, Juan

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 2.38 MB

english, 2013

5

On dichotomic classes and bijections of the genetic code

Fimmel, Elena, Danielli, Alberto, Strüngmann, Lutz

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 806 KB

english, 2013

6

Mathematical modelling of the uptake and transport of salt in plant roots

Foster, Kylie J., Miklavcic, Stanley J.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 946 KB

english, 2013

7

A novel framework for predicting the use of facultative heterothermy by endotherms

Boyles, Justin G., Warne, Robin W.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 426 KB

english, 2013

8

A novel method based on new adaptive LVQ neural network for predicting protein–protein interactions from protein sequences

Yousef, Abdulaziz, Moghadam Charkari, Nasrollah

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.71 MB

english, 2013

9

Fractional parentage analysis and a scale-free reproductive network of brown trout

Koyano, Hitoshi, Serbezov, Dimitar, Kishino, Hirohisa, Schweder, Tore

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 2.58 MB

english, 2013

10

RETRACTED: Retraction notice to “Non-local interactions and the dynamics of dispersal in immature insects”

Boldrini, J.L., Bassanezi, R.C., Moretti, A.C., Von Zuben, F.J., Godoy, W.A.C., Von Zuben, C.J., dos Reis, S.F.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 156 KB

english, 2013

11

Corrigendum to “Non-local interactions and the dynamics of dispersal in immature insects” [J. Theor. Biol. 185 (4) (1997) 523–531]

Boldrini, J.L., Bassanezi, R.C., Moretti, A.C., Von Zuben, F.J., Godoy, W.A.C., Von Zuben, C.J., dos Reis, S.F.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 360 KB

english, 2013

12

Efficacy of function specific 3D-motifs in enzyme classification according to their EC-numbers

Rahimi, Amir, Madadkar-Sobhani, Armin, Touserkani, Rouzbeh, Goliaei, Bahram

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.82 MB

english, 2013

13

A dynamical model of programmed −1 ribosomal frameshifting

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.43 MB

english, 2013

14

A dynamical system that describes vein graft adaptation and failure

Garbey, Marc, Berceli, Scott A.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 3.10 MB

english, 2013

15

A comment on “Towards a rigorous framework for studying 2-player continuous games” by Shade T. Shutters, Journal of Theoretical Biology 321, 40–43, 2013

Doebeli, Michael, Hauert, Christoph, Killingback, Timothy

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 182 KB

english, 2013

16

Consistency of Bayesian inference of resolved phylogenetic trees

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 242 KB

english, 2013

17

Editorial board

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 36 KB

english, 2013

18

Local behavioral rules sustain the cell allocation pattern in the combs of honey bee colonies (Apis mellifera)

Montovan, Kathryn J., Karst, Nathaniel, Jones, Laura E., Seeley, Thomas D.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.08 MB

english, 2013

19

Prediction of pupylation sites using the composition of k-spaced amino acid pairs

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

20

Analysis and classification of collective behavior using generative modeling and nonlinear manifold learning

Butail, Sachit, Bollt, Erik M., Porfiri, Maurizio

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.73 MB

english, 2013

21

Study of LZ-word distribution and its application for sequence comparison

Dai, Qi, Yan, Zhaofang, Shi, Zhuoxing, Liu, Xiaoqing, Yao, Yuhua, He, Pingan

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1021 KB

english, 2013

22

Evolution of stalk/spore ratio in a social amoeba: Cell-to-cell interaction via a signaling chemical shaped by cheating risk

Uchinomiya, Kouki, Iwasa, Yoh

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 612 KB

english, 2013

23

Bayesian inference supports a location and neighbour-dependent model of DNA methylation propagation at the MGMT gene promoter in lung tumours

Bonello, Nicolas, Sampson, James, Burn, John, Wilson, Ian J., McGrown, Gail, Margison, Geoff P., Thorncroft, Mary, Crossbie, Philip, Povey, Andrew C., Santibanez-Koref, Mauro, Walters, Kevin

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 430 KB

english, 2013

24

Corrigendum to “Non-local interactions and the dynamics of dispersal in immature insects” [J. Theor. Biol. 185 (4) (1997) 523–531]

Boldrini, J.L., Bassanezi, R.C., Moretti, A.C., Von Zuben, F.J., Godoy, W.A.C., Von Zuben, C.J., Dos Reis, S.F.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 124 KB

english, 2013

25

An analytic model of the self-sealing mechanism of the succulent plant Delosperma cooperi

Konrad, Wilfried, Flues, Felix, Schmich, Florian, Speck, Thomas, Speck, Olga

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 4.76 MB

english, 2013

26

Bet-hedging in stochastically switching environments

Müller, J., Hense, B.A., Fuchs, T.M., Utz, M., Pötzsche, Ch.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 593 KB

english, 2013

27

Basic rules for polarised cell growth

Jaffar, M.Z.A.M., Davidson, F.A.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 674 KB

english, 2013

28

Scaling up the predator functional response in heterogeneous environment: When Holling type III can emerge?

Cordoleani, Flora, Nerini, David, Morozov, Andrey, Gauduchon, Mathias, Poggiale, Jean-Christophe

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 840 KB

english, 2013