Volume 365

Journal of Theoretical Biology

Volume 365

1

Neighborhood functions alter unbalanced facilitation on a stress gradient

Malanson, George P., Resler, Lynn M.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.84 MB

english, 2015

2

Seasonal forcing in a host–macroparasite system

Taylor, Rachel A., White, Andrew, Sherratt, Jonathan A.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.11 MB

english, 2015

3

Speed of evolution in large asexual populations with diminishing returns

Fumagalli, Maria R., Osella, Matteo, Thomen, Philippe, Heslot, Francois, Cosentino Lagomarsino, Marco

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 833 KB

english, 2015

4

Indirect reciprocity with optional interactions

Ghang, Whan, Nowak, Martin A.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 453 KB

english, 2015

5

A two-layer classification framework for protein fold recognition

Aram, Reza Zohouri, Charkari, Nasrollah Moghadam

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 581 KB

english, 2015

6

Prediction of β-lactamase and its class by Chou’s pseudo-amino acid composition and support vector machine

Kumar, Ravindra, Srivastava, Abhishikha, Kumari, Bandana, Kumar, Manish

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.30 MB

english, 2015

7

Modelling production per unit of food consumed in fish populations

Wiff, Rodrigo, Barrientos, Mauricio A., Milessi, Andrés C., Quiroz, J.C., Harwood, John

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 615 KB

english, 2015

8

The evolution of host resistance to disease in the presence of predators

Toor, Jaspreet, Best, Alex

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 441 KB

english, 2015

9

Mathematical study for the mechanism of vascular and spot patterns by auxin and pin dynamics in plant development

Hayakawa, Yoshinori, Tachikawa, Masashi, Mochizuki, Atsushi

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 5.23 MB

english, 2015

10

Discrimination of acidic and alkaline enzyme using Chou’s pseudo amino acid composition in conjunction with probabilistic neural network model

Khan, Zaheer Ullah, Hayat, Maqsood, Khan, Muazzam Ali

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 773 KB

english, 2015

11

Mathematical modeling of aortic valve dynamics during systole

Aboelkassem, Yasser, Savic, Dragana, Campbell, Stuart G.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.90 MB

english, 2015

12

Competitive intransitivity, population interaction structure, and strategy coexistence

Laird, Robert A., Schamp, Brandon S.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 3.05 MB

english, 2015

13

Evolution of dispersal distance: Maternal investment leads to bimodal dispersal kernels

Fronhofer, Emanuel A., Joachim Poethke, Hans, Dieckmann, Ulf

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 680 KB

english, 2015

14

Mathematical modeling of tuberculosis data of China

Zhang, Jinhui, Li, Yong, Zhang, Xinan

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 470 KB

english, 2015

15

An extended genetic scale of reading frame coding

Michel, Christian J.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 529 KB

english, 2015

16

Effect of drift, selection and recombination on the equilibrium frequency of deleterious mutations

John, Sona, Jain, Kavita

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 472 KB

english, 2015

17

The role of the biarticular hamstrings and gastrocnemius muscles in closed chain lower limb extension

Cleather, Daniel J., Southgate, Dominic F.L., Bull, Anthony M.J.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 609 KB

english, 2015

18

A mathematical model on stress–strain of the epimysium of skeletal muscles

Xi, Man, Yun, Guohong, Narsu, B.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 773 KB

english, 2015

19

Comparing and distinguishing the structure of biological branching

Lamberton, Timothy O., Lefevre, James, Short, Kieran M., Smyth, Ian M., Hamilton, Nicholas A.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 2.05 MB

english, 2015

20

In silico aided thoughts on mitochondrial vitamin C transport

Szarka, András, Balogh, Tibor

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 300 KB

english, 2015

21

Modeling of sensing potency of cytoskeletal systems decorated with metabolic enzymes

Oláh, Judit, Norris, Vic, Ovádi, Judit

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 820 KB

english, 2015

22

Oxygen as a critical determinant of bone fracture healing—A multiscale model

Carlier, Aurélie, Geris, Liesbet, Gastel, Nick van, Carmeliet, Geert, Oosterwyck, Hans Van

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 3.25 MB

english, 2015

23

Folding of SAM-II riboswitch explored by replica-exchange molecular dynamics simulation

Xue, Xu, Yongjun, Wang, Zhihong, Li

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 918 KB

english, 2015

24

Fisheries-induced disruptive selection

Landi, Pietro, Hui, Cang, Dieckmann, Ulf

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 937 KB

english, 2015

25

Dynamic optimization of metabolic networks coupled with gene expression

Waldherr, Steffen, Oyarzún, Diego A., Bockmayr, Alexander

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.37 MB

english, 2015

26

A model for global diversity in response to temperature change over geological time scales, with reference to planktic organisms

De Blasio, Fabio Vittorio, Liow, Lee Hsiang, Schweder, Tore, De Blasio, Birgitte Freiesleben

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.99 MB

english, 2015

27

Is trabecular bone permeability governed by molecular ordering-induced fluid viscosity gain? Arguments from re-evaluation of experimental data in the framework of homogenization theory

Abdalrahman, T., Scheiner, S., Hellmich, C.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 759 KB

english, 2015

28

Joint fitting reveals hidden interactions in tumor growth

Barberis, L., Pasquale, M.A., Condat, C.A.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.51 MB

english, 2015

29

Network impact on persistence in a finite population dynamic diffusion model: Application to an emergent seed exchange network

Barbillon, Pierre, Thomas, Mathieu, Goldringer, Isabelle, Hospital, Frédéric, Robin, Stéphane

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 2.54 MB

english, 2015

30

On high heels and short muscles: A multiscale model for sarcomere loss in the gastrocnemius muscle

Zöllner, Alexander M., Pok, Jacquelynn M., McWalter, Emily J., Gold, Garry E., Kuhl, Ellen

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 6.11 MB

english, 2015

31

Analysis of an epidemic model with awareness decay on regular random networks

Juher, David, Kiss, Istvan Z., Saldaña, Joan

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 819 KB

english, 2015

32

Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation

Li, Rui, Xu, Liufang, Shi, Hualin

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.33 MB

english, 2015

33

Modelling of FDG metabolism in liver voxels

Baker, C., Dowson, N., Thomas, P., Rose, S.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.12 MB

english, 2015

34

Modelling the dynamics of CaMKII–NMDAR complex related to memory formation in synapses: The possible roles of threonine 286 autophosphorylation of CaMKII in long term potentiation

He, Y., Kulasiri, D., Samarasinghe, S.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.30 MB

english, 2015

35

Dynamical analysis on a chronic hepatitis C virus infection model with immune response

Li, Jianquan, Men, Ke, Yang, Yali, Li, Duan

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 902 KB

english, 2015

36

Algorithmically generated rodent hepatic vascular trees in arbitrary detail

Schwen, Lars Ole, Wei, Weiwei, Gremse, Felix, Ehling, Josef, Wang, Lei, Dahmen, Uta, Preusser, Tobias

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.86 MB

english, 2015

37

A model for the development of Aedes (Stegomyia) aegypti as a function of the available food

Romeo Aznar, Victoria, De Majo, María Sol, Fischer, Sylvia, Francisco, Diego, Natiello, Mario A., Solari, Hernán G.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 636 KB

english, 2015

38

Computational modelling of amino acid exchange and facilitated transport in placental membrane vesicles

Panitchob, N., Widdows, K.L., Crocker, I.P., Hanson, M.A., Johnstone, E.D., Please, C.P., Sibley, C.P., Glazier, J.D., Lewis, R.M., Sengers, B.G.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.39 MB

english, 2015

39

Epidemic control analysis: Designing targeted intervention strategies against epidemics propagated on contact networks

Hadjichrysanthou, Christoforos, Sharkey, Kieran J.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 586 KB

english, 2015

40

Demographic stochasticity alters the outcome of exploitation competition

Okuyama, Toshinori

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 642 KB

english, 2015

41

Population structure and the rate of evolution

Wei, Xinzhu, Zhao, Lei, Lascoux, Martin, Waxman, David

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 415 KB

english, 2015

42

Convergence analysis of a finite element skull model of Herpestes javanicus (Carnivora, Mammalia): Implications for robust comparative inferences of biomechanical function

Tseng, Zhijie Jack, Flynn, John J.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 7.01 MB

english, 2015

43

Editorial board

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 36 KB

english, 2015

44

Characterizing spiking in noisy type II neurons

Bod׳ová, Katarína, Paydarfar, David, Forger, Daniel B.

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 2.56 MB

english, 2015

45

Application of stochastic phenomenological modelling to cell-to-cell and beat-to-beat electrophysiological variability in cardiac tissue

Walmsley, John, Mirams, Gary R., Pitt-Francis, Joe, Rodriguez, Blanca, Burrage, Kevin

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.38 MB

english, 2015