Volume 73; Issue 9

Applied and Environmental Microbiology

Volume 73; Issue 9

1

Biofilm Cohesiveness Measurement Using a Novel Atomic Force Microscopy Methodology

Ahimou, F., Semmens, M. J., Novak, P. J., Haugstad, G.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 401 KB

english, 2007

2

Genetic Characterization of 2,4,6-Trichlorophenol Degradation in Cupriavidus necator JMP134

Sanchez, M. A., Gonzalez, B.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 295 KB

english, 2007

3

Dynamics of Genomic-Library Enrichment and Identification of Solvent Tolerance Genes for Clostridium acetobutylicum

Borden, J. R., Papoutsakis, E. T.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 376 KB

english, 2007

4

Effect of Protein, Polysaccharide, and Oxygen Concentration Profiles on Biofilm Cohesiveness

Ahimou, F., Semmens, M. J., Haugstad, G., Novak, P. J.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 298 KB

english, 2007

5

Two Host-Induced Ralstonia solanacearum Genes, acrA and dinF, Encode Multidrug Efflux Pumps and Contribute to Bacterial Wilt Virulence

Brown, D. G., Swanson, J. K., Allen, C.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 253 KB

english, 2007

6

Cometabolic Degradation of Dibenzofuran and Dibenzothiophene by a Newly Isolated Carbazole-Degrading Sphingomonas sp. Strain

Gai, Z., Yu, B., Li, L., Wang, Y., Ma, C., Feng, J., Deng, Z., Xu, P.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 323 KB

english, 2007

7

Acidobacteria Phylum Sequences in Uranium-Contaminated Subsurface Sediments Greatly Expand the Known Diversity within the Phylum

Barns, S. M., Cain, E. C., Sommerville, L., Kuske, C. R.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 184 KB

english, 2007

8

New Method for Evaluation of Genotoxicity, Based on the Use of Real-Time PCR and Lysogenic Gram-Positive and Gram-Negative Bacteria

Soberon, N., Martin, R., Suarez, J. E.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 235 KB

english, 2007

9

Competition for Light between Toxic and Nontoxic Strains of the Harmful Cyanobacterium Microcystis

Kardinaal, W. E. A., Tonk, L., Janse, I., Hol, S., Slot, P., Huisman, J., Visser, P. M.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 257 KB

english, 2007

10

Characterization of a Latent Virus-Like Infection of Symbiotic Zooxanthellae

Lohr, J., Munn, C. B., Wilson, W. H.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 528 KB

english, 2007

11

SYBR Green Real-Time PCR Method To Detect Clostridium botulinum Type A

Fenicia, L., Anniballi, F., De Medici, D., Delibato, E., Aureli, P.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 452 KB

english, 2007

12

Optimization of a 12-Hour TaqMan PCR-Based Method for Detection of Salmonella Bacteria in Meat

Josefsen, M. H., Krause, M., Hansen, F., Hoorfar, J.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 123 KB

english, 2007

13

Improved Luciferase Tagging System for Listeria monocytogenes Allows Real-Time Monitoring In Vivo and In Vitro

Riedel, C. U., Monk, I. R., Casey, P. G., Morrissey, D., O'Sullivan, G. C., Tangney, M., Hill, C., Gahan, C. G. M.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 371 KB

english, 2007

14

Flagellin Diversity in Clostridium botulinum Groups I and II: a New Strategy for Strain Identification

Paul, C. J., Twine, S. M., Tam, K. J., Mullen, J. A., Kelly, J. F., Austin, J. W., Logan, S. M.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 575 KB

english, 2007

15

Cloning, Characterization, and Molecular Application of a Beta-Agarase Gene from Vibrio sp. Strain V134

Zhang, W.-w., Sun, L.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 191 KB

english, 2007

16

Multiplex PCR with 16S rRNA Gene-Targeted Primers of Bifidobacterium spp. To Identify Sources of Fecal Pollution

Bonjoch, X., Balleste, E., Blanch, A. R.

Journal:

Applied and Environmental Microbiology

Year:

2007

File:

PDF, 17 KB

2007

17

Effect of the Mycorrhizosphere on the Genotypic and Metabolic Diversity of the Bacterial Communities Involved in Mineral Weathering in a Forest Soil

Uroz, S., Calvaruso, C., Turpault, M. P., Pierrat, J. C., Mustin, C., Frey-Klett, P.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 292 KB

english, 2007

18

Biogeography of Actinomycete Communities and Type II Polyketide Synthase Genes in Soils Collected in New Jersey and Central Asia

Wawrik, B., Kutliev, D., Abdivasievna, U. A., Kukor, J. J., Zylstra, G. J., Kerkhof, L.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 332 KB

english, 2007

19

Role of Lipid Composition and Lipid Peroxidation in the Sensitivity of Fungal Plant Pathogens to Aluminum Chloride and Sodium Metabisulfite

Avis, T. J., Michaud, M., Tweddell, R. J.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 110 KB

english, 2007

20

Cold-Active Chemoorganotrophic Bacteria from Permanently Ice-Covered Lake Hoare, McMurdo Dry Valleys, Antarctica

Clocksin, K. M., Jung, D. O., Madigan, M. T.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 537 KB

english, 2007

21

The Alternative Sigma Factor B and the Virulence Gene Regulator PrfA Both Regulate Transcription of Listeria monocytogenes Internalins

McGann, P., Wiedmann, M., Boor, K. J.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 430 KB

english, 2007

22

First Evidence of Division and Accumulation of Viable but Nonculturable Pseudomonas fluorescens Cells on Surfaces Subjected to Conditions Encountered at Meat Processing Premises

Peneau, S., Chassaing, D., Carpentier, B.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 212 KB

english, 2007

23

Bacterial Degradation of N,N-Diethyl-m-Toluamide (DEET): Cloning and Heterologous Expression of DEET Hydrolase

Rivera-Cancel, G., Bocioaga, D., Hay, A. G.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 174 KB

english, 2007

24

Survival of Mycobacterium avium, Legionella pneumophila, Escherichia coli, and Caliciviruses in Drinking Water-Associated Biofilms Grown under High-Shear Turbulent Flow

Lehtola, M. J., Torvinen, E., Kusnetsov, J., Pitkanen, T., Maunula, L., von Bonsdorff, C.-H., Martikainen, P. J., Wilks, S. A., Keevil, C. W., Miettinen, I. T.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 116 KB

english, 2007

25

The dasABC Gene Cluster, Adjacent to dasR, Encodes a Novel ABC Transporter for the Uptake of N,N'-Diacetylchitobiose in Streptomyces coelicolor A3(2)

Saito, A., Shinya, T., Miyamoto, K., Yokoyama, T., Kaku, H., Minami, E., Shibuya, N., Tsujibo, H., Nagata, Y., Ando, A., Fujii, T., Miyashita, K.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 205 KB

english, 2007

26

Influence of Vitamin B12 and Cocultures on the Growth of Dehalococcoides Isolates in Defined Medium

He, J., Holmes, V. F., Lee, P. K. H., Alvarez-Cohen, L.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 132 KB

english, 2007

27

Role of Cystathionine -Lyase in Catabolism of Amino Acids to Sulfur Volatiles by Genetic Variants of Lactobacillus helveticus CNRZ 32

Lee, W.-J., Banavara, D. S., Hughes, J. E., Christiansen, J. K., Steele, J. L., Broadbent, J. R., Rankin, S. A.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 378 KB

english, 2007

28

Diversity and Metabolism of Marine Bacteria Cultivated on Dissolved DNA

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 158 KB

english, 2007

29

Multiple Environmental Stress Tests Show No Common Phenotypes Shared among Contemporary Epidemic Strains of Salmonella enterica

Kang, M.-S., Besser, T. E., Hancock, D. D., Call, D. R.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 55 KB

english, 2007

30

Structural Analysis and Characterization of Lacticin Q, a Novel Bacteriocin Belonging to a New Family of Unmodified Bacteriocins of Gram-Positive Bacteria

Fujita, K., Ichimasa, S., Zendo, T., Koga, S., Yoneyama, F., Nakayama, J., Sonomoto, K.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 271 KB

english, 2007

31

Adopting Selected Hydrogen Bonding and Ionic Interactions from Aspergillus fumigatus Phytase Structure Improves the Thermostability of Aspergillus niger PhyA Phytase

Zhang, W., Mullaney, E. J., Lei, X. G.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 436 KB

english, 2007

32

Temperature-Dependent Expression of Listeria monocytogenes Internalin and Internalin-Like Genes Suggests Functional Diversity of These Proteins among the Listeriae

McGann, P., Ivanek, R., Wiedmann, M., Boor, K. J.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 192 KB

english, 2007

33

Lack of Control of Nitrite Assimilation by Ammonium in an Oceanic Picocyanobacterium, Synechococcus sp. Strain WH 8103

Wyman, M., Bird, C.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 267 KB

english, 2007

34

PCR-Based Strategy To Detect and Identify Species of Phaeoacremonium Causing Grapevine Diseases

Aroca, A., Raposo, R.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 196 KB

english, 2007

35

Considerations When Using Discriminant Function Analysis of Antimicrobial Resistance Profiles To Identify Sources of Fecal Contamination of Surface Water in Michigan

Kaneene, J. B., Miller, R., Sayah, R., Johnson, Y. J., Gilliland, D., Gardiner, J. C.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 520 KB

english, 2007

36

Transcriptional Response of Saccharomyces cerevisiae to Different Nitrogen Concentrations during Alcoholic Fermentation

Mendes-Ferreira, A., del Olmo, M., Garcia-Martinez, J., Jimenez-Marti, E., Mendes-Faia, A., Perez-Ortin, J. E., Leao, C.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 826 KB

english, 2007

37

Thiols in Nitric Oxide Synthase-Containing Nocardia sp. Strain NRRL 5646

Lee, S., Bergeron, H., Lau, P. C. K., Rosazza, J. P. N.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 82 KB

english, 2007

38

Microbial Reductive Dechlorination of Aroclor 1260 in Baltimore Harbor Sediment Microcosms Is Catalyzed by Three Phylotypes within the Phylum Chloroflexi

Fagervold, S. K., May, H. D., Sowers, K. R.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 343 KB

english, 2007

39

Actively Growing Bacteria in the Inland Sea of Japan, Identified by Combined Bromodeoxyuridine Immunocapture and Denaturing Gradient Gel Electrophoresis

Hamasaki, K., Taniguchi, A., Tada, Y., Long, R. A., Azam, F.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 304 KB

english, 2007

40

Diversity of Lactic Acid Bacteria Associated with Fish and the Fish Farm Environment, Established by Amplified rRNA Gene Restriction Analysis

Michel, C., Pelletier, C., Boussaha, M., Douet, D.-G., Lautraite, A., Tailliez, P.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 297 KB

english, 2007

41

The Microbial Community Structure in Petroleum-Contaminated Sediments Corresponds to Geophysical Signatures

Allen, J. P., Atekwana, E. A., Atekwana, E. A., Duris, J. W., Werkema, D. D., Rossbach, S.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 319 KB

english, 2007

42

Response of Nitrosospira sp. Strain AF-Like Ammonia Oxidizers to Changes in Temperature, Soil Moisture Content, and Fertilizer Concentration

Avrahami, S., Bohannan, B. J. M.

Journal:

Applied and Environmental Microbiology

Year:

2007

File:

PDF, 74 KB

2007

43

Characterization of Fusarium oxysporum -1,6-Galactanase, an Enzyme That Hydrolyzes Larch Wood Arabinogalactan

Sakamoto, T., Taniguchi, Y., Suzuki, S., Ihara, H., Kawasaki, H.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 89 KB

english, 2007

44

Refined Medium for Direct Isolation of Vibrio vulnificus from Oyster Tissue and Seawater

Warner, E., Oliver, J. D.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 73 KB

english, 2007

45

Impacts of Cultivation of Marine Diatoms on the Associated Bacterial Community

Sapp, M., Wichels, A., Gerdts, G.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 184 KB

english, 2007

46

Analysis of the Two-Peptide Bacteriocins Lactococcin G and Enterocin 1071 by Site-Directed Mutagenesis

Oppegard, C., Fimland, G., Thorbaek, L., Nissen-Meyer, J.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 399 KB

english, 2007

47

A Novel Reductive Dehalogenase, Identified in a Contaminated Groundwater Enrichment Culture and in Desulfitobacterium dichloroeliminans Strain DCA1, Is Linked to Dehalogenation of 1,2-Dichloroethane

Marzorati, M., de Ferra, F., Van Raemdonck, H., Borin, S., Allifranchini, E., Carpani, G., Serbolisca, L., Verstraete, W., Boon, N., Daffonchio, D.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 406 KB

english, 2007

48

Adherence of Enterohemorrhagic Escherichia coli O157, O26, and O111 Strains to Bovine Intestinal Explants Ex Vivo

Girard, F., Dziva, F., van Diemen, P., Phillips, A. D., Stevens, M. P., Frankel, G.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 960 KB

english, 2007

49

Automated Image Analysis for Quantitative Fluorescence In Situ Hybridization with Environmental Samples

Zhou, Z., Pons, M. N., Raskin, L., Zilles, J. L.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 193 KB

english, 2007

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