Volume 9; Issue 12

Molecular & Cellular Proteomics

Volume 9; Issue 12

1

The Protein Interaction Network of the Human Transcription Machinery Reveals a Role for the Conserved GTPase RPAP4/GPN1 and Microtubule Assembly in Nuclear Import and Biogenesis of RNA Polymerase II

Forget, D., Lacombe, A.-A., Cloutier, P., Al-Khoury, R., Bouchard, A., Lavallee-Adam, M., Faubert, D., Jeronimo, C., Blanchette, M., Coulombe, B.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 4.18 MB

english, 2010

2

Discovery and Verification of Osteopontin and Beta-2-microglobulin as Promising Markers for Staging Human African Trypanosomiasis

Tiberti, N., Hainard, A., Lejon, V., Robin, X., Ngoyi, D. M., Turck, N., Matovu, E., Enyaru, J., Ndung'u, J. M., Scherl, A., Dayon, L., Sanchez, J.-C.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.36 MB

english, 2010

3

Musite, a Tool for Global Prediction of General and Kinase-specific Phosphorylation Sites

Gao, J., Thelen, J. J., Dunker, A. K., Xu, D.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.44 MB

english, 2010

4

A Strategy for Interaction Site Prediction between Phospho-binding Modules and their Partners Identified from Proteomic Data

Aucher, W., Becker, E., Ma, E., Miron, S., Martel, A., Ochsenbein, F., Marsolier-Kergoat, M.-C., Guerois, R.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 3.00 MB

english, 2010

5

Comprehensive Analysis of Phosphorylation Sites in Tensin1 Reveals Regulation by p38MAPK

Hall, E. H., Balsbaugh, J. L., Rose, K. L., Shabanowitz, J., Hunt, D. F., Brautigan, D. L.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.40 MB

english, 2010

6

Characterization of Macaque Pulmonary Fluid Proteome during Monkeypox Infection: DYNAMICS OF HOST RESPONSE

Brown, J. N., Estep, R. D., Lopez-Ferrer, D., Brewer, H. M., Clauss, T. R., Manes, N. P., O'Connor, M., Li, H., Adkins, J. N., Wong, S. W., Smith, R. D.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.85 MB

english, 2010

7

A Combined Proteomics and Metabolomics Profiling of Gastric Cardia Cancer Reveals Characteristic Dysregulations in Glucose Metabolism

Cai, Z., Zhao, J.-S., Li, J.-J., Peng, D.-N., Wang, X.-Y., Chen, T.-L., Qiu, Y.-P., Chen, P.-P., Li, W.-J., Xu, L.-Y., Li, E.-M., Tam, J. P. M., Qi, R. Z., Jia, W., Xie, D.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.07 MB

english, 2010

8

Identification of Essential Filovirion-associated Host Factors by Serial Proteomic Analysis and RNAi Screen

Spurgers, K. B., Alefantis, T., Peyser, B. D., Ruthel, G. T., Bergeron, A. A., Costantino, J. A., Enterlein, S., Kota, K. P., Boltz, R. C. D., Aman, M. J., DelVecchio, V. G., Bavari, S.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.86 MB

english, 2010

9

Global Proteomics Reveal an Atypical Strategy for Carbon/Nitrogen Assimilation by a Cyanobacterium Under Diverse Environmental Perturbations

Wegener, K. M., Singh, A. K., Jacobs, J. M., Elvitigala, T., Welsh, E. A., Keren, N., Gritsenko, M. A., Ghosh, B. K., Camp, D. G., Smith, R. D., Pakrasi, H. B.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.91 MB

english, 2010

10

The Penicillium Chrysogenum Extracellular Proteome. Conversion from a Food-rotting Strain to a Versatile Cell Factory for White Biotechnology

Jami, M.-S., Garcia-Estrada, C., Barreiro, C., Cuadrado, A.-A., Salehi-Najafabadi, Z., Martin, J.-F.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.78 MB

english, 2010

11

A Proteomic Analysis Reveals Differential Regulation of the S-Dependent yciGFE(katN) Locus by YncC and H-NS in Salmonella and Escherichia coli K-12

Beraud, M., Kolb, A., Monteil, V., D'Alayer, J., Norel, F.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 3.52 MB

english, 2010

12

Deconvolution and Database Search of Complex Tandem Mass Spectra of Intact Proteins: A COMBINATORIAL APPROACH

Liu, X., Inbar, Y., Dorrestein, P. C., Wynne, C., Edwards, N., Souda, P., Whitelegge, J. P., Bafna, V., Pevzner, P. A.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.68 MB

english, 2010

13

Increased Power for the Analysis of Label-free LC-MS/MS Proteomics Data by Combining Spectral Counts and Peptide Peak Attributes

Dicker, L., Lin, X., Ivanov, A. R.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.53 MB

english, 2010

14

eEF1A Phosphorylation in the Nucleus of Insulin-stimulated C2C12 Myoblasts: SER53 IS A NOVEL SUBSTRATE FOR PROTEIN KINASE C I

Piazzi, M., Bavelloni, A., Faenza, I., Blalock, W., Urbani, A., D'Aguanno, S., Fiume, R., Ramazzotti, G., Maraldi, N. M., Cocco, L.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.14 MB

english, 2010

15

Quantitative Proteomics Discloses MET Expression in Mitochondria as a Direct Target of MET Kinase Inhibitor in Cancer Cells

Guo, T., Zhu, Y., Gan, C. S., Lee, S. S., Zhu, J., Wang, H., Li, X., Christensen, J., Huang, S., Kon, O. L., Sze, S. K.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.38 MB

english, 2010

16

Evolutionary Constraints of Phosphorylation in Eukaryotes, Prokaryotes, and Mitochondria

Gnad, F., Forner, F., Zielinska, D. F., Birney, E., Gunawardena, J., Mann, M.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 817 KB

english, 2010

17

The Generating Function of CID, ETD, and CID/ETD Pairs of Tandem Mass Spectra: Applications to Database Search

Kim, S., Mischerikow, N., Bandeira, N., Navarro, J. D., Wich, L., Mohammed, S., Heck, A. J. R., Pevzner, P. A.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 3.17 MB

english, 2010

18

Complexomics Study of Two Helicobacter pylori Strains of Two Pathological Origins: POTENTIAL TARGETS FOR VACCINE DEVELOPMENT AND NEW INSIGHT IN BACTERIA METABOLISM

Bernarde, C., Lehours, P., Lasserre, J.-P., Castroviejo, M., Bonneu, M., Megraud, F., Menard, A.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.87 MB

english, 2010

19

The Impact of Gene Expression Regulation on Evolution of Extracellular Signaling Pathways

Charoensawan, V., Adryan, B., Martin, S., Sollner, C., Thisse, B., Thisse, C., Wright, G. J., Teichmann, S. A.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 1.99 MB

english, 2010

20

Construction of a Large Extracellular Protein Interaction Network and Its Resolution by Spatiotemporal Expression Profiling

Martin, S., Sollner, C., Charoensawan, V., Adryan, B., Thisse, B., Thisse, C., Teichmann, S., Wright, G. J.

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 3.44 MB

english, 2010

21

The Leukocyte Nuclear Envelope Proteome Varies with Cell Activation and Contains Novel Transmembrane Proteins That Affect Genome Architecture

Korfali, N., Wilkie, G. S., Swanson, S. K., Srsen, V., Batrakou, D. G., Fairley, E. A. L., Malik, P., Zuleger, N., Goncharevich, A., de las Heras, J., Kelly, D. A., Kerr, A. R. W., Florens, L., Schirm

Journal:

Molecular & Cellular Proteomics

Year:

2010

Language:

english

File:

PDF, 2.91 MB

english, 2010